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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912626
Clone id YMU001_000021_A10
Library
Length 545
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_A10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTTTTTTTCCAAACAAACATCATTTTTCCTTGCAAAAGACCCCTCTCCA
TTCCAAGGAATCTGACTCCATACAAGCATATTGAGCATTCTGGCCCTTTTGCTTCACTCT
GGCCAGGTTTTGAATGGCGAAGTGCCTGTACAAATAAAGCATATATCCCATACTCTCCAC
CCTAAGAGGCTAAAAATCTCAATGCATACAATCAGAATTTTGCTTGTATGATGCAAAATT
GTAATGCGCTGTGTCCTCATCATCGCTTTGAAAAGGGGTTCGCTTTGCGACACTCACCAA
AACTCAATTCCACATCGCTTTTTACATATATGTACAAACCACATGTATATACTTAGTGCT
ACGCAAAAGCAGCTTGTGTTGGCCTCACCACGCTTCTGTGGTCATTTCTGACTCCAGAAA
AACAAGGTGTTACCACTGGGCTTCTATGCTTGCGATCGTCGGCAACAATTTGCTTGTATA
GGCATTCCTGAGAGCAGAATGCTTGATCGCCCCTGTACATAAAGATATCCTTCCCAGCCC
AGCAG
■■Homology search results ■■ -
sp_hit_id Q6C2N7
Definition sp|Q6C2N7|ATG15_YARLI Putative lipase ATG15 OS=Yarrowia lipolytica
Align length 26
Score (bit) 32.0
E-value 1.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912626|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A10.
         (526 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6C2N7|ATG15_YARLI Putative lipase ATG15 OS=Yarrowia lipolyti...    32   1.9  
sp|P52220|CCMC_PARDP Heme exporter protein C OS=Paracoccus denit...    31   3.2  
sp|Q8MNZ1|GP63_LEITR Leishmanolysin OS=Leishmania tropica GN=msp...    30   9.1  
sp|O83964|FTSK_TREPA DNA translocase ftsK OS=Treponema pallidum ...    30   9.2  

>sp|Q6C2N7|ATG15_YARLI Putative lipase ATG15 OS=Yarrowia lipolytica
           GN=ATG15 PE=3 SV=2
          Length = 549

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = -2

Query: 498 YRGDQAFCSQECLYKQIVADDRKHRS 421
           Y G+   C QECL K++ A+DR +R+
Sbjct: 283 YTGESYTCDQECLEKELYAEDRYYRA 308


>sp|P52220|CCMC_PARDP Heme exporter protein C OS=Paracoccus
           denitrificans (strain Pd 1222) GN=ccmC PE=3 SV=2
          Length = 241

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +2

Query: 344 AKAACVGLTTLLWSFLTPE--KQGVTTGLLCLRSSATI 451
           A AA   +T L+W FLTPE  KQG T  ++ L   A +
Sbjct: 25  AGAAACTVTGLVWGFLTPEDYKQGATVKIIFLHVPAAL 62


>sp|Q8MNZ1|GP63_LEITR Leishmanolysin OS=Leishmania tropica GN=mspC
           PE=3 SV=1
          Length = 657

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 5/36 (13%)
 Frame = -3

Query: 110 NLARVKQKGQNAQYA-----CMESDSLEWRGVFCKE 18
           N A+V   G+NA  A     CME +  +WR +FC E
Sbjct: 375 NKAKVMPWGRNAGCAFLSEKCMEQNITKWRAMFCNE 410


>sp|O83964|FTSK_TREPA DNA translocase ftsK OS=Treponema pallidum
           GN=ftsK PE=3 SV=1
          Length = 799

 Score = 29.6 bits (65), Expect = 9.2
 Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
 Frame = -2

Query: 189 YALRFLAS*GGEYGIYAL-FVQALRHSKPGQSEAKGPECSICLYGVRFLGMERGLLQGKM 13
           + L F+ +  GE+G+YAL    A R   P         C +CL  +    +   L+ G+ 
Sbjct: 88  FPLLFITAVCGEHGLYALRRALAARSISPSTRGGIDIVCVLCLLALLGAELYAALIYGER 147

Query: 12  MFVW 1
            +VW
Sbjct: 148 CYVW 151
tr_hit_id A9NT09
Definition tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 35
Score (bit) 51.6
E-value 2.0e-05
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912626|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A10.
         (526 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea...    52   2e-05
tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea...    50   9e-05
tr|A7PDT1|A7PDT1_VITVI Chromosome chr11 scaffold_13, whole genom...    49   1e-04
tr|A5AP27|A5AP27_VITVI Putative uncharacterized protein OS=Vitis...    49   1e-04
tr|A2Z1K2|A2Z1K2_ORYSI Putative uncharacterized protein OS=Oryza...    49   1e-04
tr|Q9SGZ8|Q9SGZ8_ARATH F28K19.24 (Putative uncharacterized prote...    49   2e-04
tr|Q8L9M2|Q8L9M2_ARATH Putative uncharacterized protein OS=Arabi...    49   2e-04
tr|A9NNE9|A9NNE9_PICSI Putative uncharacterized protein OS=Picea...    49   2e-04
tr|Q8VY80|Q8VY80_ARATH Putative uncharacterized protein At1g2216...    48   3e-04
tr|Q0J5A6|Q0J5A6_ORYSJ Os08g0451200 protein OS=Oryza sativa subs...    48   3e-04
tr|B7FN07|B7FN07_MEDTR Putative uncharacterized protein OS=Medic...    48   3e-04
tr|Q69PH9|Q69PH9_ORYSJ Os09g0433800 protein OS=Oryza sativa subs...    48   3e-04
tr|A3BZ50|A3BZ50_ORYSJ Putative uncharacterized protein OS=Oryza...    48   3e-04
tr|B6SU44|B6SU44_MAIZE Putative uncharacterized protein OS=Zea m...    47   5e-04
tr|B8BB95|B8BB95_ORYSI Putative uncharacterized protein OS=Oryza...    47   6e-04
tr|A9PJY7|A9PJY7_POPJC Putative uncharacterized protein OS=Popul...    47   6e-04
tr|A2XHS3|A2XHS3_ORYSI Putative uncharacterized protein OS=Oryza...    47   6e-04
tr|Q7XP53|Q7XP53_ORYSJ OSJNBa0013K16.14 protein OS=Oryza sativa ...    47   8e-04
tr|Q0JAP2|Q0JAP2_ORYSJ Os04g0585900 protein (Fragment) OS=Oryza ...    47   8e-04
tr|Q01K60|Q01K60_ORYSA H0307D04.6 protein OS=Oryza sativa GN=H03...    47   8e-04
tr|B8LPG4|B8LPG4_PICSI Putative uncharacterized protein OS=Picea...    47   8e-04
tr|A2XWV9|A2XWV9_ORYSI Putative uncharacterized protein OS=Oryza...    47   8e-04
tr|A7R1E8|A7R1E8_VITVI Chromosome undetermined scaffold_349, who...    46   0.001
tr|A4Q7P0|A4Q7P0_MEDTR Putative uncharacterized protein OS=Medic...    46   0.001
tr|B6TKC9|B6TKC9_MAIZE Putative uncharacterized protein OS=Zea m...    45   0.002
tr|A7NV17|A7NV17_VITVI Chromosome chr18 scaffold_1, whole genome...    45   0.002
tr|Q6ZHB7|Q6ZHB7_ORYSJ Os02g0686800 protein OS=Oryza sativa subs...    45   0.002
tr|Q2A991|Q2A991_BRAOL Putative uncharacterized protein OS=Brass...    45   0.002
tr|O80506|O80506_ARATH Expressed protein (Putative uncharacteriz...    45   0.002
tr|B8AGR7|B8AGR7_ORYSI Putative uncharacterized protein OS=Oryza...    45   0.002

>tr|A9NT09|A9NT09_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 21/35 (60%), Positives = 28/35 (80%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHRSPVV 412
           G+DI+MYRGD AFCS EC ++QIV D+RK +  V+
Sbjct: 104 GRDIYMYRGDSAFCSIECRHQQIVLDERKEKRTVI 138


>tr|A9NZH8|A9NZH8_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 166

 Score = 49.7 bits (117), Expect = 9e-05
 Identities = 20/35 (57%), Positives = 28/35 (80%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHRSPVV 412
           G+DI+MYRG+ AFCS EC ++QIV D+RK +  V+
Sbjct: 104 GRDIYMYRGNSAFCSIECRHQQIVLDERKEKRTVI 138


>tr|A7PDT1|A7PDT1_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016401001
           PE=4 SV=1
          Length = 235

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHR 424
           GKDI+MYRG++AFCS EC  +QIV D+RK +
Sbjct: 176 GKDIYMYRGEKAFCSNECRSRQIVMDERKEQ 206


>tr|A5AP27|A5AP27_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_039443 PE=4 SV=1
          Length = 235

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 20/31 (64%), Positives = 26/31 (83%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHR 424
           GKDI+MYRG++AFCS EC  +QIV D+RK +
Sbjct: 176 GKDIYMYRGEKAFCSNECRSRQIVMDERKEQ 206


>tr|A2Z1K2|A2Z1K2_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_31488 PE=4 SV=1
          Length = 174

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 23/55 (41%), Positives = 33/55 (60%)
 Frame = -2

Query: 513 KDIFMYRGDQAFCSQECLYKQIVADDRKHRSPVVTPCFSGVRNDHRSVVRPTQAA 349
           KD++MYRGDQ FCS+EC ++QI+ D+ + R  +      G+   H    RP  AA
Sbjct: 110 KDVYMYRGDQGFCSEECRWQQIMTDEARERDAMAKKERLGL---HHRTPRPPPAA 161


>tr|Q9SGZ8|Q9SGZ8_ARATH F28K19.24 (Putative uncharacterized protein
           At1g78020) OS=Arabidopsis thaliana GN=At1g78020 PE=2
           SV=1
          Length = 162

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHRSPVVTP 406
           G+DI+MYRGD+AFCS EC  +Q+  D+RK +     P
Sbjct: 103 GRDIYMYRGDKAFCSSECRQEQMAQDERKEKGKSAAP 139


>tr|Q8L9M2|Q8L9M2_ARATH Putative uncharacterized protein
           OS=Arabidopsis thaliana PE=2 SV=1
          Length = 162

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 19/37 (51%), Positives = 26/37 (70%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHRSPVVTP 406
           G+DI+MYRGD+AFCS EC  +Q+  D+RK +     P
Sbjct: 103 GRDIYMYRGDKAFCSSECRQEQMAQDERKEKGKSAAP 139


>tr|A9NNE9|A9NNE9_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 142

 Score = 48.5 bits (114), Expect = 2e-04
 Identities = 20/32 (62%), Positives = 25/32 (78%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHRS 421
           G+DI+MYRGD AFCS EC  +QI  D+RK +S
Sbjct: 74  GRDIYMYRGDTAFCSVECRQQQITMDERKEKS 105


>tr|Q8VY80|Q8VY80_ARATH Putative uncharacterized protein At1g22160
           (Putative uncharacterized protein) OS=Arabidopsis
           thaliana GN=At1g22160 PE=2 SV=1
          Length = 147

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 19/31 (61%), Positives = 25/31 (80%)
 Frame = -2

Query: 516 GKDIFMYRGDQAFCSQECLYKQIVADDRKHR 424
           G+DI+MYRGD+AFCS EC  +QI  D+RK +
Sbjct: 92  GRDIYMYRGDRAFCSLECRQQQITVDERKEK 122


>tr|Q0J5A6|Q0J5A6_ORYSJ Os08g0451200 protein OS=Oryza sativa subsp.
           japonica GN=Os08g0451200 PE=4 SV=1
          Length = 191

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 18/33 (54%), Positives = 25/33 (75%)
 Frame = -2

Query: 513 KDIFMYRGDQAFCSQECLYKQIVADDRKHRSPV 415
           KD++MYRGDQ FCS+EC ++QI  D+ + R  V
Sbjct: 124 KDVYMYRGDQGFCSEECRWQQIAVDEAREREAV 156