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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912627
Clone id YMU001_000021_A11
Library
Length 560
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_A11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGATGTGCGCAGCATAGTTTGTACAAACATGCTAAGATCTGTTCTGAGCACATGTGTAAA
GCAGGTGTAAAGCCAGATGGGGTTACATTTCTCTGTCTCTTATCTTCCTGTGCGCATGCA
GGGTCAGTAGAGGAAGGTCAGCGTCTTTTCAAGTCTATGAAGAGGGACTATGGGTTAACA
CCCATTCCTGACCATTATAGCTGCATGCTTGATTTGCTTGGACGGGCTGGTTGCATTGAG
GAGGCCGCAGATTTTCACGATTGTACACCATGTGAAACAAGTGTAGGGGGACAGACCTCC
TTACTTAGTCATTGCAAGGAGAAGGGATTTGTGGAGGTGGGAAACTTATGCTTCAATTAG
CTCATGGACTTGAAGGACCAAGATACTTAAGATTACATGGGCATTTTGCATGCCAATTTA
AATGCAGCACCATCAGATAAAAGACCTTTCTTGGATGTGTCTTGAGAAGATACACATGCA
AGAGGTGCTGGCTTTTTCTTGAATAAAATGATCTCCAACGGATGAATGGACAATGCAAAC
CTCTAATTTCTTGGATCATG
■■Homology search results ■■ -
sp_hit_id Q9STE1
Definition sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300 OS=Arabidopsis thaliana
Align length 142
Score (bit) 100.0
E-value 4.0e-21
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912627|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A11.
         (560 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protei...   100   4e-21
sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containi...   100   6e-21
sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containi...    99   2e-20
sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protei...    98   3e-20
sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protei...    98   3e-20
sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protei...    97   5e-20
sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protei...    97   7e-20
sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protei...    96   9e-20
sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protei...    96   9e-20
sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protei...    96   9e-20
sp|Q7XJN6|PP197_ARATH Pentatricopeptide repeat-containing protei...    96   1e-19
sp|Q9FMA1|PP433_ARATH Pentatricopeptide repeat-containing protei...    95   2e-19
sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protei...    94   5e-19
sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protei...    94   5e-19
sp|Q9LUS3|PP237_ARATH Pentatricopeptide repeat-containing protei...    94   5e-19
sp|Q9SIL5|PP165_ARATH Pentatricopeptide repeat-containing protei...    93   8e-19
sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protei...    93   1e-18
sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containi...    92   2e-18
sp|Q9C9I6|PP116_ARATH Pentatricopeptide repeat-containing protei...    92   2e-18
sp|O04659|PP398_ARATH Pentatricopeptide repeat-containing protei...    90   7e-18
sp|Q9LUL5|PP229_ARATH Pentatricopeptide repeat-containing protei...    90   7e-18
sp|Q9LNP2|PPR47_ARATH Putative pentatricopeptide repeat-containi...    90   9e-18
sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protei...    90   9e-18
sp|Q9LJI9|PP260_ARATH Pentatricopeptide repeat-containing protei...    90   9e-18
sp|O49287|PP127_ARATH Putative pentatricopeptide repeat-containi...    90   9e-18
sp|Q9C6T2|PPR68_ARATH Pentatricopeptide repeat-containing protei...    89   1e-17
sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protei...    89   1e-17
sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protei...    89   1e-17
sp|Q9FND6|PP411_ARATH Pentatricopeptide repeat-containing protei...    89   1e-17
sp|Q9SZK1|PP355_ARATH Pentatricopeptide repeat-containing protei...    89   1e-17

>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein
            At4g21300 OS=Arabidopsis thaliana GN=PCMP-E36 PE=2 SV=1
          Length = 857

 Score =  100 bits (250), Expect = 4e-21
 Identities = 54/142 (38%), Positives = 80/142 (56%), Gaps = 1/142 (0%)
 Frame = +1

Query: 4    CAQHSLYKHAKICSEHMC-KAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
            C  H   K +      M  K+G++PD +TFL ++SSC H G V+EG R F+SM  DYG+ 
Sbjct: 618  CGNHGKLKDSLCLFHEMVEKSGIRPDQITFLEIISSCCHVGDVDEGVRFFRSMTEDYGIQ 677

Query: 181  PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
            P  +HY+C++DL GRAG + EA +     P     G   +LL  C+    VE+  +  + 
Sbjct: 678  PQQEHYACVVDLFGRAGRLTEAYETVKSMPFPPDAGVWGTLLGACRLHKNVELAEVASSK 737

Query: 361  LMDLKDQDT*DYMGILHANLNA 426
            LMDL   ++  Y+ I +A+ NA
Sbjct: 738  LMDLDPSNSGYYVLISNAHANA 759


>sp|Q9CAY1|PP223_ARATH Putative pentatricopeptide repeat-containing
           protein At3g11460 OS=Arabidopsis thaliana GN=PCMP-H52
           PE=3 SV=1
          Length = 623

 Score =  100 bits (248), Expect = 6e-21
 Identities = 48/119 (40%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = +1

Query: 1   GC-AQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGL 177
           GC   H + +   +  + M K G++PDG  F+ +LS+C+H+G  ++G  LF++MKR+Y L
Sbjct: 331 GCYGMHGMGEIGLMLFDDMIKRGIRPDGAVFVMVLSACSHSGLTDKGLELFRAMKREYKL 390

Query: 178 TPIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCF 354
            P P+HYSC++DLLGRAG ++EA +F +  P E       +LL  CK    V++  L F
Sbjct: 391 EPGPEHYSCLVDLLGRAGRLDEAMEFIESMPVEPDGAVWGALLGACKIHKNVDMAELAF 449



 Score = 42.7 bits (99), Expect = 0.001
 Identities = 32/119 (26%), Positives = 56/119 (47%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G +Q+ L        E M  +GV PD  T + +LSSCAH G+ + G  + K ++ + G  
Sbjct: 231 GYSQNGLAYDVLELYEQMKSSGVCPDPFTLVSVLSSCAHLGAKKIGHEVGKLVESN-GFV 289

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN 357
           P     +  + +  R G + +A    D  P ++ V   T+++      G  E+G + F+
Sbjct: 290 PNVFVSNASISMYARCGNLAKARAVFDIMPVKSLV-SWTAMIGCYGMHGMGEIGLMLFD 347



 Score = 31.2 bits (69), Expect = 3.6
 Identities = 25/103 (24%), Positives = 43/103 (41%)
 Frame = +1

Query: 7   AQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPI 186
           A  SL+  +      M ++G  PD  +F  +L SCA       GQ+L   + +  G    
Sbjct: 29  AYQSLFSESISLYRSMLRSGSSPDAFSFPFILKSCASLSLPVSGQQLHCHVTKG-GCETE 87

Query: 187 PDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHC 315
           P   + ++ +  + G + +A    +  P       Q+S LS C
Sbjct: 88  PFVLTALISMYCKCGLVADARKVFEENP-------QSSQLSVC 123


>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing
           protein At1g68930 OS=Arabidopsis thaliana GN=PCMP-H22
           PE=3 SV=1
          Length = 743

 Score = 98.6 bits (244), Expect = 2e-20
 Identities = 49/109 (44%), Positives = 69/109 (63%)
 Frame = +1

Query: 46  EHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPDHYSCMLDLLGR 225
           + M + G+KPDGVT   ++S+C+ AG VE+GQR FK M  +YG+ P   HYSCM+DL  R
Sbjct: 461 DKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR 520

Query: 226 AGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN*LMDL 372
           +G +EEA  F +  P      G T+LLS C+ KG +E+G      L++L
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIEL 569



 Score = 38.5 bits (88), Expect = 0.023
 Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ+ L K A  C   M   G+K D   F  +L +C   G++ EG+++   + R    T
Sbjct: 244 GLAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIR----T 299

Query: 181 PIPDHY---SCMLDLLGRAGCIEEAADFHD 261
              DH    S ++D+  +  C+  A    D
Sbjct: 300 NFQDHIYVGSALIDMYCKCKCLHYAKTVFD 329



 Score = 32.0 bits (71), Expect = 2.1
 Identities = 19/65 (29%), Positives = 34/65 (52%)
 Frame = +1

Query: 52  MCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPDHYSCMLDLLGRAG 231
           M ++G+ PD  T    +S+CA+  S+EEG + F       GL       + ++ L G+ G
Sbjct: 362 MQRSGIDPDHYTLGQAISACANVSSLEEGSQ-FHGKAITSGLIHYVTVSNSLVTLYGKCG 420

Query: 232 CIEEA 246
            I+++
Sbjct: 421 DIDDS 425


>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein
            At4g33170 OS=Arabidopsis thaliana GN=PCMP-H53 PE=2 SV=1
          Length = 990

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 54/145 (37%), Positives = 82/145 (56%)
 Frame = +1

Query: 1    GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
            G AQH   K      + M   G+KPD VTF+ +LS+C+H+G V E  +  +SM  DYG+ 
Sbjct: 693  GLAQHGEGKETLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIK 752

Query: 181  PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
            P  +HYSC+ D LGRAG +++A +  +    E S     +LL+ C+ +G  E G      
Sbjct: 753  PEIEHYSCLADALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATK 812

Query: 361  LMDLKDQDT*DYMGILHANLNAAPS 435
            L++L+  D+  Y  +L +N+ AA S
Sbjct: 813  LLELEPLDSSAY--VLLSNMYAAAS 835


>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein
           At2g13600 OS=Arabidopsis thaliana GN=PCMP-E76 PE=2 SV=1
          Length = 697

 Score = 97.8 bits (242), Expect = 3e-20
 Identities = 54/142 (38%), Positives = 82/142 (57%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ+     A      M ++G KPD +T + +LS+C HAG VEEG+  F SM RD+G+ 
Sbjct: 467 GFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSSMTRDFGVA 526

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P+ DHY+CM+DLLGRAG +EEA    +  P +       SLL+ CK    + +G      
Sbjct: 527 PLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNITLGKYVAEK 586

Query: 361 LMDLKDQDT*DYMGILHANLNA 426
           L++++  ++  Y  +L +N+ A
Sbjct: 587 LLEVEPSNSGPY--VLLSNMYA 606



 Score = 33.9 bits (76), Expect = 0.56
 Identities = 22/86 (25%), Positives = 44/86 (51%)
 Frame = +1

Query: 52  MCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPDHYSCMLDLLGRAG 231
           M ++ V+PD VT   ++S+CA   +++ GQ +   + ++  L       +  +D+  +  
Sbjct: 244 MLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVKNDKLRNDIILSNAFVDMYAKCS 303

Query: 232 CIEEAADFHDCTPCETSVGGQTSLLS 309
            I+EA    D  P   +V  +TS++S
Sbjct: 304 RIKEARFIFDSMPIR-NVIAETSMIS 328


>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-H13 PE=2 SV=3
          Length = 612

 Score = 97.1 bits (240), Expect = 5e-20
 Identities = 58/148 (39%), Positives = 85/148 (57%), Gaps = 3/148 (2%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQH   + A    + M   GVKP+ VTF+ L+ +C+H G VE+G+ LF+SM +DYG+ 
Sbjct: 313 GMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDYGIR 372

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P   HY+C+LDLLGR+G ++EA +     P         +LLS CK +G  ++G    + 
Sbjct: 373 PSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRIADH 432

Query: 361 LMD---LKDQDT*DYMGILHANLNAAPS 435
           L+    LKD  T     IL +N+ A+ S
Sbjct: 433 LVSSFKLKDPST----YILLSNIYASAS 456



 Score = 31.6 bits (70), Expect = 2.8
 Identities = 17/87 (19%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
 Frame = +1

Query: 61  AGVKPDGVTFLCLLSSCAHAGSVEEGQRLF-KSMKRDYGLTPIPDHYSCMLDLLGRAGCI 237
           +G++PD   F  L+ +CA+ GS++ G+++    +  +Y    +    S ++D+  + G +
Sbjct: 99  SGLRPDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVK--SSLVDMYAKCGLL 156

Query: 238 EEAADFHDCTPCETSVGGQTSLLSHCK 318
             A    D    + ++     +  + K
Sbjct: 157 NSAKAVFDSIRVKNTISWTAMVSGYAK 183


>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein
           At5g04780 OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
          Length = 635

 Score = 96.7 bits (239), Expect = 7e-20
 Identities = 55/143 (38%), Positives = 83/143 (58%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G A+H+  K   I  E M + G+ P+ VTF  LLS C H G VEEG+R FK M+  YGL+
Sbjct: 338 GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLS 397

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P   HYSCM+D+LGRAG + EA +     P + +     SLL+ C+    +E+  +    
Sbjct: 398 PNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEK 457

Query: 361 LMDLKDQDT*DYMGILHANLNAA 429
           L +L+ ++  ++  +L +N+ AA
Sbjct: 458 LFELEPENAGNH--VLLSNIYAA 478


>sp|Q9C8L6|PPR80_ARATH Pentatricopeptide repeat-containing protein
           At1g53600, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E63 PE=2 SV=2
          Length = 717

 Score = 96.3 bits (238), Expect = 9e-20
 Identities = 48/113 (42%), Positives = 70/113 (61%)
 Frame = +1

Query: 61  AGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPDHYSCMLDLLGRAGCIE 240
           +G +P+GVTFL LLS+C H G V+ G + FKSMK  Y + P PDHY+CM+DLLGR+G ++
Sbjct: 533 SGKEPNGVTFLALLSACVHVGYVDLGWKYFKSMKSSYNIEPGPDHYACMVDLLGRSGLLD 592

Query: 241 EAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN*LMDLKDQDT*DYM 399
           +A++     PC+   G   SLLS  K    V++  L    L++L+      Y+
Sbjct: 593 DASNLISTMPCKPHSGVWGSLLSASKTHLRVDLAELAAKKLIELEPDSATPYV 645


>sp|Q9LND4|PPR14_ARATH Pentatricopeptide repeat-containing protein
           At1g06140, mitochondrial OS=Arabidopsis thaliana
           GN=PCMP-E61 PE=2 SV=1
          Length = 558

 Score = 96.3 bits (238), Expect = 9e-20
 Identities = 47/102 (46%), Positives = 66/102 (64%)
 Frame = +1

Query: 13  HSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPD 192
           + L++ A  C   M    V P+ VTF+ LLS+C+H+G+V+EG + F+SM RDYG+ P  +
Sbjct: 391 NGLFEEALDCFHKMKSQNVVPNSVTFVSLLSACSHSGNVKEGWKQFESMTRDYGVVPEEE 450

Query: 193 HYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCK 318
           HY+CM+DLLGRAG I EA  F D  P +       +LLS C+
Sbjct: 451 HYACMVDLLGRAGEIGEAKSFIDNMPVKPMASAWGALLSACR 492


>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein
           At3g49710 OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
          Length = 721

 Score = 96.3 bits (238), Expect = 9e-20
 Identities = 48/122 (39%), Positives = 70/122 (57%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQH     A +  + M  +G+ P+ +TF+ +LS+CAH G V+EGQ  F +MK  + + 
Sbjct: 421 GYAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIE 480

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P  +HYSCM+DLLGRAG +EEA  F D  P +       +LL  C++   + +     N 
Sbjct: 481 PEAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANE 540

Query: 361 LM 366
           LM
Sbjct: 541 LM 542
tr_hit_id A9P0W0
Definition tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 143
Score (bit) 117.0
E-value 3.0e-25
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912627|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_A11.
         (560 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea...   117   3e-25
tr|Q67UW7|Q67UW7_ORYSJ Putative pentatricopeptide (PPR) repeat-c...   109   1e-22
tr|B8AHT0|B8AHT0_ORYSI Putative uncharacterized protein OS=Oryza...   109   1e-22
tr|A3A370|A3A370_ORYSJ Putative uncharacterized protein OS=Oryza...   109   1e-22
tr|A7QLP0|A7QLP0_VITVI Chromosome chr13 scaffold_120, whole geno...   107   3e-22
tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genom...   107   3e-22
tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome...   107   3e-22
tr|A7QJF8|A7QJF8_VITVI Chromosome chr8 scaffold_106, whole genom...   106   1e-21
tr|Q2QNV4|Q2QNV4_ORYSJ Pentatricopeptide, putative, expressed OS...   104   3e-21
tr|Q0IMR5|Q0IMR5_ORYSJ Os12g0552300 protein OS=Oryza sativa subs...   104   3e-21
tr|A7PPE3|A7PPE3_VITVI Chromosome chr8 scaffold_23, whole genome...   104   3e-21
tr|A7PK13|A7PK13_VITVI Chromosome chr15 scaffold_19, whole genom...   104   3e-21
tr|A5BU15|A5BU15_VITVI Putative uncharacterized protein OS=Vitis...   104   3e-21
tr|A3CIA3|A3CIA3_ORYSJ Putative uncharacterized protein OS=Oryza...   104   3e-21
tr|A5AR18|A5AR18_VITVI Putative uncharacterized protein OS=Vitis...   104   4e-21
tr|A7QNZ8|A7QNZ8_VITVI Chromosome chr1 scaffold_135, whole genom...   103   5e-21
tr|A5B772|A5B772_VITVI Putative uncharacterized protein OS=Vitis...   103   5e-21
tr|A7P886|A7P886_VITVI Chromosome chr3 scaffold_8, whole genome ...   102   1e-20
tr|Q6L4I3|Q6L4I3_ORYSJ Os05g0212100 protein OS=Oryza sativa subs...   102   1e-20
tr|A7PP85|A7PP85_VITVI Chromosome chr8 scaffold_23, whole genome...   102   2e-20
tr|A5BVN8|A5BVN8_VITVI Putative uncharacterized protein OS=Vitis...   102   2e-20
tr|A2Y1K2|A2Y1K2_ORYSI Putative uncharacterized protein OS=Oryza...   102   2e-20
tr|Q6ETD1|Q6ETD1_ORYSJ Os02g0106300 protein OS=Oryza sativa subs...   101   2e-20
tr|A9RJW2|A9RJW2_PHYPA Predicted protein OS=Physcomitrella paten...   100   5e-20
tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea...   100   7e-20
tr|A7QV49|A7QV49_VITVI Chromosome undetermined scaffold_185, who...   100   7e-20
tr|Q7FA49|Q7FA49_ORYSJ OSJNBa0013K16.3 protein OS=Oryza sativa s...    99   1e-19
tr|B8ATC9|B8ATC9_ORYSI Putative uncharacterized protein OS=Oryza...    99   1e-19
tr|A7QV08|A7QV08_VITVI Chromosome undetermined scaffold_183, who...    99   1e-19
tr|A7PRH4|A7PRH4_VITVI Chromosome chr14 scaffold_27, whole genom...    99   1e-19

>tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 370

 Score =  117 bits (294), Expect = 3e-25
 Identities = 60/143 (41%), Positives = 89/143 (62%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQH   K A +  E M + GVKP+ +TF+ +LS C+HAG V+EG+  F SM RD+G++
Sbjct: 73  GLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYFDSMTRDHGIS 132

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P  +HYSCM+DL GRAGC++EA +F +  P E +     SLL  C+  G +E+       
Sbjct: 133 PKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQ 192

Query: 361 LMDLKDQDT*DYMGILHANLNAA 429
           L++L  ++   Y  +L +N+ AA
Sbjct: 193 LIELTPENPGTY--VLLSNIYAA 213


>tr|Q67UW7|Q67UW7_ORYSJ Putative pentatricopeptide (PPR)
            repeat-containing protein OS=Oryza sativa subsp. japonica
            GN=OSJNBa0050G13.19 PE=4 SV=1
          Length = 922

 Score =  109 bits (272), Expect = 1e-22
 Identities = 57/133 (42%), Positives = 81/133 (60%)
 Frame = +1

Query: 1    GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
            G AQH L + A    +HM  AGV P+ VTF+ LL++C+HAG V+EG + FKSM +DYGLT
Sbjct: 625  GYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLT 684

Query: 181  PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
            P+P+HY+CM+DLLGR G ++ A  F    P E      ++LL  CK     E+G      
Sbjct: 685  PLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEK 744

Query: 361  LMDLKDQDT*DYM 399
            L  ++  +  +Y+
Sbjct: 745  LFRIEPSNAGNYV 757


>tr|B8AHT0|B8AHT0_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_05871 PE=4 SV=1
          Length = 922

 Score =  109 bits (272), Expect = 1e-22
 Identities = 57/133 (42%), Positives = 81/133 (60%)
 Frame = +1

Query: 1    GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
            G AQH L + A    +HM  AGV P+ VTF+ LL++C+HAG V+EG + FKSM +DYGLT
Sbjct: 625  GYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLT 684

Query: 181  PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
            P+P+HY+CM+DLLGR G ++ A  F    P E      ++LL  CK     E+G      
Sbjct: 685  PLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEK 744

Query: 361  LMDLKDQDT*DYM 399
            L  ++  +  +Y+
Sbjct: 745  LFRIEPSNAGNYV 757


>tr|A3A370|A3A370_ORYSJ Putative uncharacterized protein OS=Oryza
            sativa subsp. japonica GN=OsJ_005242 PE=4 SV=1
          Length = 973

 Score =  109 bits (272), Expect = 1e-22
 Identities = 57/133 (42%), Positives = 81/133 (60%)
 Frame = +1

Query: 1    GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
            G AQH L + A    +HM  AGV P+ VTF+ LL++C+HAG V+EG + FKSM +DYGLT
Sbjct: 625  GYAQHGLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLT 684

Query: 181  PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
            P+P+HY+CM+DLLGR G ++ A  F    P E      ++LL  CK     E+G      
Sbjct: 685  PLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEK 744

Query: 361  LMDLKDQDT*DYM 399
            L  ++  +  +Y+
Sbjct: 745  LFRIEPSNAGNYV 757


>tr|A7QLP0|A7QLP0_VITVI Chromosome chr13 scaffold_120, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00001706001
           PE=4 SV=1
          Length = 760

 Score =  107 bits (268), Expect = 3e-22
 Identities = 65/145 (44%), Positives = 84/145 (57%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G   H L K A    E M K  +KP+ VTFLC+LS+C+H+G VEEG + F SMK+DYGL 
Sbjct: 464 GYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLE 523

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P  DHY  M+DLLGRA  + EA DF    P E ++    ++L  C+    VE+G    N 
Sbjct: 524 PAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNVELGEKAANR 583

Query: 361 LMDLKDQDT*DYMGILHANLNAAPS 435
           + DL D D   Y  +L AN+ A  S
Sbjct: 584 IFDL-DPDDGGY-HVLLANIYATAS 606


>tr|A7QIJ2|A7QIJ2_VITVI Chromosome chr9 scaffold_104, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000282001
           PE=4 SV=1
          Length = 814

 Score =  107 bits (268), Expect = 3e-22
 Identities = 58/143 (40%), Positives = 86/143 (60%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G ++H   K A I  E M K G+ P+ VTFL +LS+C+H G VEEG R+F SM+ DY + 
Sbjct: 514 GYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIE 573

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
              +HY+CM+DLLGRAG +E+A +F +  P E  V    +LL  C+    +++G L    
Sbjct: 574 AKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQR 633

Query: 361 LMDLKDQDT*DYMGILHANLNAA 429
           L +L  Q+   Y  ++ +N+ AA
Sbjct: 634 LFELDPQNPGPY--VIMSNIYAA 654


>tr|A7PNA8|A7PNA8_VITVI Chromosome chr1 scaffold_22, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00021165001
           PE=4 SV=1
          Length = 697

 Score =  107 bits (268), Expect = 3e-22
 Identities = 53/118 (44%), Positives = 80/118 (67%)
 Frame = +1

Query: 46  EHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTPIPDHYSCMLDLLGR 225
           E M   G+KPDGVTF+ +LS+C+ AG VE+G + F+SM +++G+ PI DH +C++DLLGR
Sbjct: 415 ERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGR 474

Query: 226 AGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN*LMDLKDQDT*DYM 399
           AG +EEA +F +  PC   V G  +LLS C+  G +E+G    + L+ L+ Q+   Y+
Sbjct: 475 AGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYV 532


>tr|A7QJF8|A7QJF8_VITVI Chromosome chr8 scaffold_106, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00000621001
           PE=4 SV=1
          Length = 523

 Score =  106 bits (264), Expect = 1e-21
 Identities = 53/127 (41%), Positives = 78/127 (61%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQH L + A      +   G+KPD VTF+ +L +C H+G +EEG++LF+SM   YG+ 
Sbjct: 226 GLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIK 285

Query: 181 PIPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN* 360
           P  +HY CM+DLLGR GC+EEA D     P E +     +LLS C+  G V++G +    
Sbjct: 286 PQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHGNVKIGEIAGQK 345

Query: 361 LMDLKDQ 381
           L++++ Q
Sbjct: 346 LLEMEAQ 352



 Score = 40.8 bits (94), Expect = 0.050
 Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
 Frame = +1

Query: 7   AQHSLYKHAKICSE------HMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRD 168
           A  S Y  A  CSE       M   G+KPD VT + +LS+CA  G+ + G+RL+     +
Sbjct: 118 AMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIEN 177

Query: 169 YGLTPIPDHYSCMLDLLGRAGCIEEAAD 252
                     + ++D+  + G I+ A +
Sbjct: 178 GVFNQNTILTAAVMDMYAKCGSIDSALE 205


>tr|Q2QNV4|Q2QNV4_ORYSJ Pentatricopeptide, putative, expressed
            OS=Oryza sativa subsp. japonica GN=LOC_Os12g36620 PE=4
            SV=2
          Length = 1176

 Score =  104 bits (260), Expect = 3e-21
 Identities = 53/137 (38%), Positives = 80/137 (58%)
 Frame = +1

Query: 4    CAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTP 183
            C+QH     A    + M K G+KP+ VTF+ +L++C+H G VEEG   FKSM  +YG+ P
Sbjct: 623  CSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRP 682

Query: 184  IPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN*L 363
             PDHY+C++D+ GRAG ++ A  F +  P         +LLS CK    +EVG      L
Sbjct: 683  RPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHL 742

Query: 364  MDLKDQDT*DYMGILHA 414
            ++L+  D+  Y+ + +A
Sbjct: 743  LELEPHDSASYVLLSNA 759



 Score = 36.6 bits (83), Expect = 0.95
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ    +HA    E M  +G+ PD VT   LL++CA  G +++G +L   + +  G++
Sbjct: 218 GHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK-AGIS 276

Query: 181 PIPDHYSCMLDLLGRAGCIEEA 246
                   +LDL  + G +E A
Sbjct: 277 SDYIMEGSLLDLYVKCGDVETA 298



 Score = 34.3 bits (77), Expect = 4.7
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G  QH   K A    + M K G+ PD +     +S CA   ++ +G ++   +    G +
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYS 478

Query: 181 PIPDHYSCMLDLLGRAGCIEEA 246
                ++ +++L  R G I EA
Sbjct: 479 GDVSIWNALVNLYARCGRIREA 500



 Score = 33.5 bits (75), Expect = 8.1
 Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ  L++ A      M ++GVK +  TF+  LS+ A+   +++G+++   + +  G +
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHS 579

Query: 181 PIPDHYSCMLDLLGRAGCIEEA-ADFHDCTPCETSVGGQTSLLSHCKEKG 327
              +  + ++ L G+ G  E+A  +F + +  E +     ++++ C + G
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMS--ERNEVSWNTIITSCSQHG 627


>tr|Q0IMR5|Q0IMR5_ORYSJ Os12g0552300 protein OS=Oryza sativa subsp.
            japonica GN=Os12g0552300 PE=4 SV=1
          Length = 1175

 Score =  104 bits (260), Expect = 3e-21
 Identities = 53/137 (38%), Positives = 80/137 (58%)
 Frame = +1

Query: 4    CAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLTP 183
            C+QH     A    + M K G+KP+ VTF+ +L++C+H G VEEG   FKSM  +YG+ P
Sbjct: 623  CSQHGRGLEALDLFDQMKKEGIKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSDEYGIRP 682

Query: 184  IPDHYSCMLDLLGRAGCIEEAADFHDCTPCETSVGGQTSLLSHCKEKGFVEVGNLCFN*L 363
             PDHY+C++D+ GRAG ++ A  F +  P         +LLS CK    +EVG      L
Sbjct: 683  RPDHYACVIDIFGRAGQLDRAKKFIEEMPIAADAMVWRTLLSACKVHKNIEVGEFAAKHL 742

Query: 364  MDLKDQDT*DYMGILHA 414
            ++L+  D+  Y+ + +A
Sbjct: 743  LELEPHDSASYVLLSNA 759



 Score = 36.6 bits (83), Expect = 0.95
 Identities = 26/82 (31%), Positives = 42/82 (51%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ    +HA    E M  +G+ PD VT   LL++CA  G +++G +L   + +  G++
Sbjct: 218 GHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFK-AGIS 276

Query: 181 PIPDHYSCMLDLLGRAGCIEEA 246
                   +LDL  + G +E A
Sbjct: 277 SDYIMEGSLLDLYVKCGDVETA 298



 Score = 34.3 bits (77), Expect = 4.7
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G  QH   K A    + M K G+ PD +     +S CA   ++ +G ++   +    G +
Sbjct: 420 GYVQHECCKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHARIYVS-GYS 478

Query: 181 PIPDHYSCMLDLLGRAGCIEEA 246
                ++ +++L  R G I EA
Sbjct: 479 GDVSIWNALVNLYARCGRIREA 500



 Score = 33.5 bits (75), Expect = 8.1
 Identities = 25/110 (22%), Positives = 57/110 (51%), Gaps = 1/110 (0%)
 Frame = +1

Query: 1   GCAQHSLYKHAKICSEHMCKAGVKPDGVTFLCLLSSCAHAGSVEEGQRLFKSMKRDYGLT 180
           G AQ  L++ A      M ++GVK +  TF+  LS+ A+   +++G+++   + +  G +
Sbjct: 521 GFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKT-GHS 579

Query: 181 PIPDHYSCMLDLLGRAGCIEEA-ADFHDCTPCETSVGGQTSLLSHCKEKG 327
              +  + ++ L G+ G  E+A  +F + +  E +     ++++ C + G
Sbjct: 580 FETEVGNALISLYGKCGSFEDAKMEFSEMS--ERNEVSWNTIITSCSQHG 627