BP912632 |
Clone id |
YMU001_000021_B04 |
Library |
YMU01 |
Length |
533 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_B04. |
Accession |
BP912632 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3146Contig1 |
Sequence |
AATCCATATTGCACTTGCACCATTTAAGAGGTTATGGTTATGGATATGATTATGATCAGC CCATATACGCAGAAGAAGTTTTGAATTCTTATAACACATGCCTGAGGGGACGGATGGACT CAATGCTGTGCGGTGACGAGCTGTAGCTGAAGAAGCTCCTCTTCTGGAATAGTTCGGAAG TGGCAATCAGACTGCGGGACGGCCATGCAGAGGAGGGCATACCCTTTTTCAATCACATCA TCGCTAAGCATGCTGCCTGATTGATCGACGGAGCCGGAGACTAACTTCGCCGGGCATGTC ATACACACTCCAAGCTTGCAATCGTATGGCACATCCAAATCCGCCTCTAGAGCCTTCTCC AGTATCGTCTCCCCATCTTCTACCTCCAGCGTGTGTACCTTCCCCTTGTGCTCCACCTCC ACCTTGTACGCTCTGCATACACCCCTCGTCTTCTGATTCTGAAGCTTCTGGCTATGGCGT TGAAAACCTCGCTGCAGAAAAGAGAGCTGTGGGCTTGCCTTTCTTTGTGACGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
P00248 |
Definition |
sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus |
Align length |
95 |
Score (bit) |
93.6 |
E-value |
5.0e-19 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912632|Adiantum capillus-veneris mRNA, clone: YMU001_000021_B04. (533 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=pet... 94 5e-19 sp|P00247|FER_CHLFR Ferredoxin OS=Chlorogloeopsis fritschii PE=1... 91 3e-18 sp|P14937|FER2_RAPSA Ferredoxin, root R-B2 OS=Raphanus sativus P... 91 5e-18 sp|Q9ZQG8|FER3_ARATH Ferredoxin-3, chloroplastic OS=Arabidopsis ... 90 6e-18 sp|P00252|FER1_NOSMU Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2 90 8e-18 sp|P00234|FER1_EQUTE Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1 89 2e-17 sp|P00245|FER_SPIMA Ferredoxin OS=Spirulina maxima PE=1 SV=2 88 2e-17 sp|P0A3D1|FER_THEVL Ferredoxin-1 OS=Thermosynechococcus vulcanus... 87 4e-17 sp|P0A3C9|FER_THEEB Ferredoxin-1 OS=Thermosynechococcus elongatu... 87 4e-17 sp|P15788|FER_SYNP4 Ferredoxin OS=Synechococcus sp. (strain PCC ... 87 4e-17 sp|P00255|FER_SYNLI Ferredoxin OS=Synechococcus lividus PE=1 SV=2 87 4e-17 sp|P0A3D0|FER_SYNEN Ferredoxin-1 OS=Synechococcus elongatus naeg... 87 4e-17 sp|P00235|FER1_EQUAR Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1 87 4e-17 sp|P00253|FER_NOSMU Ferredoxin OS=Nostoc muscorum PE=1 SV=2 87 7e-17 sp|P0A3C7|FER1_ANASP Ferredoxin-1 OS=Anabaena sp. (strain PCC 71... 87 7e-17 sp|P0A3C8|FER1_ANASO Ferredoxin-1 OS=Anabaena sp. (strain PCC 71... 87 7e-17 sp|P00243|FER_SYNY4 Ferredoxin OS=Synechocystis sp. (strain PCC ... 86 1e-16 sp|Q51577|FER1_PLEBO Ferredoxin-1 OS=Plectonema boryanum GN=petF... 86 1e-16 sp|P00254|FER1_ANAVT Ferredoxin-1 OS=Anabaena variabilis (strain... 86 1e-16 sp|P27320|FER_SYNY3 Ferredoxin-1 OS=Synechocystis sp. (strain PC... 85 2e-16 sp|P00246|FER_SPIPL Ferredoxin OS=Spirulina platensis PE=1 SV=2 85 2e-16 sp|P00244|FER1_APHFL Ferredoxin-1 OS=Aphanizomenon flos-aquae PE... 85 2e-16 sp|P14936|FER1_RAPSA Ferredoxin, root R-B1 OS=Raphanus sativus P... 84 4e-16 sp|P27788|FER3_MAIZE Ferredoxin-3, chloroplastic OS=Zea mays GN=... 83 9e-16 sp|P17007|FER1_CYAPA Ferredoxin-1 OS=Cyanophora paradoxa GN=petF... 82 1e-15 sp|P00236|FER2_EQUTE Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1 82 2e-15 sp|P08451|FER2_SYNP6 Ferredoxin-2 OS=Synechococcus sp. (strain A... 81 4e-15 sp|P83522|FER_HORVU Ferredoxin OS=Hordeum vulgare PE=1 SV=1 80 5e-15 sp|O78510|FER_GUITH Ferredoxin OS=Guillardia theta GN=petF PE=3 ... 80 5e-15 sp|P00237|FER2_EQUAR Ferredoxin-2 OS=Equisetum arvense PE=1 SV=1 80 5e-15
>sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2 Length = 99
Score = 93.6 bits (231), Expect = 5e-19 Identities = 50/95 (52%), Positives = 61/95 (64%), Gaps = 3/95 (3%) Frame = -1
Query: 428 YKVEV--EHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG 255 YKV + E +G T+EV D + IL+ A EA +D+PY C+ G C TC KL+SG+VDQS Sbjct: 4 YKVTLINEAEGLNKTIEVPDDQYILDAAEEAGIDLPYSCRAGACSTCAGKLISGTVDQSD 63
Query: 254 -SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IE GY L C+A P SDC T EEEL Sbjct: 64 QSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEEEL 98
>sp|P00247|FER_CHLFR Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2 Length = 99
Score = 91.3 bits (225), Expect = 3e-18 Identities = 49/95 (51%), Positives = 60/95 (63%), Gaps = 3/95 (3%) Frame = -1
Query: 428 YKVEV--EHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG 255 YKV + + +G T+EV+D IL+ A EA LD+PY C+ G C TC K+ SG+VDQS Sbjct: 4 YKVTLINDAEGLNQTIEVDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKIKSGTVDQSD 63
Query: 254 -SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IE GY L C+A P SDC T EEEL Sbjct: 64 QSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEEEL 98
>sp|P14937|FER2_RAPSA Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1 Length = 98
Score = 90.5 bits (223), Expect = 5e-18 Identities = 46/94 (48%), Positives = 61/94 (64%), Gaps = 2/94 (2%) Frame = -1
Query: 428 YKVE-VEHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQS-G 255 YKV+ + +G+ + EV+D + IL+ A EA +D+PY C+ G C TC ++V G VDQS G Sbjct: 4 YKVKLIGPEGEENEFEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEG 63
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD EKG+ L C+A PQSDC T E EL Sbjct: 64 SFLEDDHFEKGFVLTCVAYPQSDCVIHTHKETEL 97
>sp|Q9ZQG8|FER3_ARATH Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1 SV=1 Length = 155
Score = 90.1 bits (222), Expect = 6e-18 Identities = 47/94 (50%), Positives = 61/94 (64%), Gaps = 2/94 (2%) Frame = -1
Query: 428 YKVEV-EHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQS-G 255 YKV++ G+ EV+D + IL+ A EA +D+PY C+ G C TC ++VSG+VDQS G Sbjct: 61 YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L D +EKGY L C+A PQSDC T E EL Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154
>sp|P00252|FER1_NOSMU Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2 Length = 99
Score = 89.7 bits (221), Expect = 8e-18 Identities = 48/94 (51%), Positives = 60/94 (63%), Gaps = 2/94 (2%) Frame = -1
Query: 428 YKVE-VEHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG- 255 YKV V+ +G T++V D E IL+ A + LD+PY C+ G C TC K+VSG+VDQS Sbjct: 5 YKVTLVDQEGTETTIDVPDDEYILDIAEDQGLDLPYSCRAGACSTCAGKIVSGTVDQSDQ 64
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IEKGY L C+A P SD T EE+L Sbjct: 65 SFLDDDQIEKGYVLTCVAYPTSDLKIETHKEEDL 98
>sp|P00234|FER1_EQUTE Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1 Length = 95
Score = 88.6 bits (218), Expect = 2e-17 Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 1/94 (1%) Frame = -1
Query: 431 AYKVEVEHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQS-G 255 AYK ++ TL+V +G TIL+ A EA D+P+ C+ G C +C K+VSGSVDQS G Sbjct: 1 AYKTVLKTPSGEFTLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDQSEG 60
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L D +E+G+ L C+A+P+SD T EEEL Sbjct: 61 SFLDDGQMEEGFVLTCIAIPESDLVIETHKEEEL 94
>sp|P00245|FER_SPIMA Ferredoxin OS=Spirulina maxima PE=1 SV=2 Length = 99
Score = 88.2 bits (217), Expect = 2e-17 Identities = 47/95 (49%), Positives = 59/95 (62%), Gaps = 3/95 (3%) Frame = -1
Query: 428 YKVEV--EHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG 255 YKV + E +G T++ +D IL+ A EA LD+PY C+ G C TC K+ SGS+DQS Sbjct: 4 YKVTLISEAEGINETIDCDDDTYILDAAEEAGLDLPYSCRAGACSTCAGKITSGSIDQSD 63
Query: 254 -SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IE GY L C+A P SDC +T EE L Sbjct: 64 QSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEEGL 98
>sp|P0A3D1|FER_THEVL Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2 Length = 98
Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Frame = -1
Query: 428 YKVE-VEHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG- 255 YKV V G T++V + E IL+ A E LD+P+ C+ G C TC KL+ G VDQS Sbjct: 4 YKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQ 63
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IEKG+ L C+A P+SDC T EEEL Sbjct: 64 SFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P0A3C9|FER_THEEB Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1) GN=petF1 PE=1 SV=2 Length = 98
Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/94 (50%), Positives = 58/94 (61%), Gaps = 2/94 (2%) Frame = -1
Query: 428 YKVE-VEHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQSG- 255 YKV V G T++V + E IL+ A E LD+P+ C+ G C TC KL+ G VDQS Sbjct: 4 YKVTLVRPDGSETTIDVPEDEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQSDQ 63
Query: 254 SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IEKG+ L C+A P+SDC T EEEL Sbjct: 64 SFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P15788|FER_SYNP4 Ferredoxin OS=Synechococcus sp. (strain PCC 7418) PE=1 SV=2 Length = 99
Score = 87.4 bits (215), Expect = 4e-17 Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 3/96 (3%) Frame = -1
Query: 431 AYKVEV--EHKGKVHTLEVEDGETILEKALEADLDVPYDCKLGVCMTCPAKLVSGSVDQS 258 +YKV + E G T+EV D E IL+ A E +D+PY C+ G C TC K+ G +DQS Sbjct: 3 SYKVTLINEEMGLNETIEVPDDEYILDVAEEEGIDLPYSCRAGACSTCAGKIKEGEIDQS 62
Query: 257 G-SMLSDDVIEKGYALLCMAVPQSDCHFRTIPEEEL 153 S L DD IE GY L C+A P SDC T EEEL Sbjct: 63 DQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEEEL 98
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8LD29 |
Definition |
tr|Q8LD29|Q8LD29_ARATH Ferredoxin OS=Arabidopsis thaliana |
Align length |
106 |
Score (bit) |
159.0 |
E-value |
1.0e-37 |
Report |
|