BP912643 |
Clone id |
YMU001_000021_C05 |
Library |
YMU01 |
Length |
546 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_C05. |
Accession |
BP912643 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTTTTTTTTTTCACATTGGTAGAAACATCATCTTTTGCATGTGAAACACCATTG AGAGGCATAAACAGTAAGGATGGCATCATATGTACATTCTTCTCAATATCTTTCTCCTCA TTAAATGCTTTTTGCTCTTTCCCAAGAGAACCATCATGATACGATATTAAATTAGAGGTT TTCTTTGTATCCACATCAATCCATATAGTAACATTTGGCTCCATATCACCTTCCAATCCA AACTGCCTCACTCTCTCTAGCTTCCATTCCTTATGCTTTGCAATCGATACTGCATCCTCA AATGTAAGTGGCCTCTTAAGCACAACCTTTACCTTCAAATCAGCCCTCAAACTTTGCATA AACATACACTTTTTAAGCATAAGAGGAGGAGCATCACTTCCCAAAGAAACACACCATCTT CTCCACAAAGCATTGAACTCCTTGACAAAGGCATCTACACTTTGACCATCACATTGCACA AGTCCTTCAATGGAGTTCCATACATCCGTTGGGTCCTCTACCTTCGAGTACCTGCAGGTA ATATCT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q5RC06 |
Definition |
sp|Q5RC06|CTNL1_PONAB Alpha-catulin OS=Pongo abelii |
Align length |
98 |
Score (bit) |
33.5 |
E-value |
0.65 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7TLQ6 |
Definition |
tr|A7TLQ6|A7TLQ6_VANPO AGL178W family transposase OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) |
Align length |
84 |
Score (bit) |
40.4 |
E-value |
0.056 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912643|Adiantum capillus-veneris mRNA, clone: YMU001_000021_C05. (529 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A7TLQ6|A7TLQ6_VANPO AGL178W family transposase OS=Vanderwalto... 40 0.056 tr|Q7XBS7|Q7XBS7_ORYSJ Retrotransposon protein, putative, unclas... 39 0.21 tr|Q7XW82|Q7XW82_ORYSJ OSJNBa0019J05.12 protein OS=Oryza sativa ... 36 1.1 tr|Q7X7Y2|Q7X7Y2_ORYSJ OSJNBa0065J03.2 protein OS=Oryza sativa s... 35 1.8 tr|Q01JG0|Q01JG0_ORYSA H0502G05.6 protein OS=Oryza sativa GN=H05... 35 2.4 tr|B0DER7|B0DER7_LACBS Predicted protein OS=Laccaria bicolor (st... 35 2.4 tr|Q8TH40|Q8TH40_METAC Transposase OS=Methanosarcina acetivorans... 35 2.4 tr|Q7N849|Q7N849_PHOLL Similarities with peptide synthetase like... 34 4.0 tr|Q0E362|Q0E362_ORYSJ Os02g0192200 protein OS=Oryza sativa subs... 34 4.0 tr|A2X1X1|A2X1X1_ORYSI Putative uncharacterized protein OS=Oryza... 34 4.0 tr|B2RBI4|B2RBI4_HUMAN cDNA, FLJ95528, highly similar to Homo sa... 34 4.0 tr|Q4R8U4|Q4R8U4_MACFA Testis cDNA clone: QtsA-11445, similar to... 34 5.3 tr|B5BU47|B5BU47_HUMAN Alpha-catulin OS=Homo sapiens GN=CTNNAL1 ... 33 6.9 tr|B3KMX6|B3KMX6_HUMAN cDNA FLJ12864 fis, clone NT2RP2003604, hi... 33 6.9 tr|Q7RDK2|Q7RDK2_PLAYO Vacuolar proton translocating ATPase 116 ... 33 9.0 tr|Q23JB5|Q23JB5_TETTH Putative uncharacterized protein OS=Tetra... 33 9.0 tr|Q4PGK8|Q4PGK8_USTMA Putative uncharacterized protein OS=Ustil... 33 9.0
>tr|A7TLQ6|A7TLQ6_VANPO AGL178W family transposase OS=Vanderwaltozyma polyspora (strain ATCC 22028 / DSM 70294) GN=Kpol_1056p49 PE=4 SV=1 Length = 280
Score = 40.4 bits (93), Expect = 0.056 Identities = 24/84 (28%), Positives = 45/84 (53%) Frame = -2
Query: 516 RYSKVEDPTDVWNSIEGLVQCDGQSVDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQ 337 R+ ++ DP ++N +E L + S DAF+ EFN L+R L + L+ K +++ Sbjct: 97 RFERIPDPEQLFNDMERLQPMEMGS-DAFITEFNRLYR----LLPPGSLSLVAAKHFYLK 151
Query: 336 SLRADLKVKVVLKRPLTFEDAVSI 265 ++ + + + L P TFE+ +I Sbjct: 152 NMDRSIAIAIRLANPQTFEELYNI 175
>tr|Q7XBS7|Q7XBS7_ORYSJ Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os10g42880 PE=4 SV=2 Length = 1459
Score = 38.5 bits (88), Expect = 0.21 Identities = 24/88 (27%), Positives = 48/88 (54%) Frame = -2
Query: 444 SVDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQSLRADLKVKVVLKRPLTFEDAVSI 265 SV +V++F++L + S P + K F++ LR+D+++ V+++RP + S+ Sbjct: 446 SVSEYVEKFDSLMHQLLAYYNSLLPVYFVTK--FIEGLRSDIRMVVLVQRPQDLDSTCSV 503
Query: 264 AKHKEWKLERVRQFGLEGDMEPNVTIWI 181 A +E +E V+ +G PN ++ I Sbjct: 504 ALLQEEAMEGVK---FQGYKRPNNSVMI 528
>tr|Q7XW82|Q7XW82_ORYSJ OSJNBa0019J05.12 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0019J05.12 PE=4 SV=2 Length = 1817
Score = 36.2 bits (82), Expect = 1.1 Identities = 24/78 (30%), Positives = 46/78 (58%) Frame = -2
Query: 462 VQCDGQSVDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQSLRADLKVKVVLKRPLTF 283 ++ DG SV +V++F++L + S P + K F++ LR+D++V V+++RP Sbjct: 388 IRQDG-SVAEYVEKFDSLMHQLLAYDNSLLPVYFVTK--FVEGLRSDIRVVVLVQRPQDM 444
Query: 282 EDAVSIAKHKEWKLERVR 229 + A ++A +E LE V+ Sbjct: 445 DSACAVALLQEEALEGVQ 462
>tr|Q7X7Y2|Q7X7Y2_ORYSJ OSJNBa0065J03.2 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0065J03.2 PE=4 SV=2 Length = 1629
Score = 35.4 bits (80), Expect = 1.8 Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 7/124 (5%) Frame = -2
Query: 444 SVDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQSLRADLKVKVVLKRPLTFEDAVSI 265 +V +V++F+++ + + P + K F++ LR D++ V+L+RP + A SI Sbjct: 298 TVTEYVEQFDSIMHQLMAYDSALTPVYFVTK--FIEGLRDDVRGAVMLQRPQDLDSACSI 355
Query: 264 AKHKEWKLE-------RVRQFGLEGDMEPNVTIWIDVDTKKTSNLISYHDGSLGKEQKAF 106 A +E LE R + P + ++ V + S +S HD G E Sbjct: 356 ALLQEEILESNKSTTHRRSDNHIAFRPVPKLNNYVPVPPGQRSVAVSAHDDKKGVESAKS 415
Query: 105 NEEK 94 E+K Sbjct: 416 REDK 419
>tr|Q01JG0|Q01JG0_ORYSA H0502G05.6 protein OS=Oryza sativa GN=H0502G05.6 PE=4 SV=1 Length = 898
Score = 35.0 bits (79), Expect = 2.4 Identities = 20/71 (28%), Positives = 41/71 (57%) Frame = -2
Query: 441 VDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQSLRADLKVKVVLKRPLTFEDAVSIA 262 V +V++F++L + S P + K F++ LR+D++V V+++RP + A ++A Sbjct: 238 VSEYVEKFDSLMHQLLAYDNSLLPVYFVTK--FVEGLRSDIRVVVLVQRPQDLDSACAVA 295
Query: 261 KHKEWKLERVR 229 +E LE ++ Sbjct: 296 LLQEEALEGIK 306
>tr|B0DER7|B0DER7_LACBS Predicted protein OS=Laccaria bicolor (strain S238N-H82) GN=LACBIDRAFT_328401 PE=4 SV=1 Length = 315
Score = 35.0 bits (79), Expect = 2.4 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 1/92 (1%) Frame = +2
Query: 203 SISPSNPNCLTLSSFHSLCFAIDTA-SSNVSGLLSTTFTFKSALKLCINIHFLSIRGGAS 379 S+SPS P L LS S ++ + SS++S L + ++L HF S+ S Sbjct: 224 SLSPSLPLSLPLSLPPSFSLSLPPSLSSSLSSSLPPSLPLSTSLTPSPLHHFTSLTSPPS 283
Query: 380 LPKETHHLLHKALNSLTKASTL*PSHCTSPSM 475 + HH LH +L+ T T+ P SPS+ Sbjct: 284 IALSLHHSLHHSLHHST-TPTITPPLPPSPSL 314
>tr|Q8TH40|Q8TH40_METAC Transposase OS=Methanosarcina acetivorans GN=MA_1290 PE=4 SV=1 Length = 553
Score = 35.0 bits (79), Expect = 2.4 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 8/76 (10%) Frame = -2
Query: 219 LEGDMEPNVTIWIDVDTKKT------SNLI--SYHDGSLGKEQKAFNEEKDIEKNVHMMP 64 LEG +P + WID D +K N++ H K K +N + +E + ++ Sbjct: 399 LEGKKKPQLKFWIDEDNEKKCEKTFGKNILFTDKHKWQTKKIVKTYNSKNLVEDDFKLLN 458
Query: 63 SLLFMPLNGVSHAKDD 16 L +P+ V H KD+ Sbjct: 459 DHLLVPVGPVYHHKDE 474
>tr|Q7N849|Q7N849_PHOLL Similarities with peptide synthetase like pristinamycin I synthase 3 OS=Photorhabdus luminescens subsp. laumondii GN=plu0898 PE=3 SV=1 Length = 1577
Score = 34.3 bits (77), Expect = 4.0 Identities = 24/91 (26%), Positives = 47/91 (51%), Gaps = 3/91 (3%) Frame = -2
Query: 462 VQCDGQSVDAFVKEFNALWRRWCVSLGSDAPPLMLKKCMFMQSLRADLKVKVVLKRPLTF 283 + CDG S+ F+ E L+R +C G+ PPL ++ + Q R L+ ++ K+ + Sbjct: 213 IACDGWSLAIFISELLTLYRAYCQGEGNPLPPLPVQYTDYSQWQRDWLQGDILEKQLDYW 272
Query: 282 EDAVS-IAKHKEWKLE--RVRQFGLEGDMEP 199 ++ +S I+ + L+ R + EG++ P Sbjct: 273 QNQLSAISPLHRFPLDNPRPEKQNFEGNVHP 303
>tr|Q0E362|Q0E362_ORYSJ Os02g0192200 protein OS=Oryza sativa subsp. japonica GN=Os02g0192200 PE=2 SV=1 Length = 720
Score = 34.3 bits (77), Expect = 4.0 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -2
Query: 354 KCMFMQSLRADLKVKVVLKRPLTFEDAVSIAKHKEWKLERVRQFGLEGDMEPNVTIWIDV 175 K F + A ++ V RPL F D +S+ +K WKL EGDM P +D Sbjct: 316 KFRFFVAFHASIQGFVHGCRPLLFLDVISVKPNKHWKLLAATSVDGEGDMFPVALSVVDD 375
Query: 174 DTKK 163 ++++ Sbjct: 376 ESQE 379
>tr|A2X1X1|A2X1X1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06197 PE=4 SV=1 Length = 638
Score = 34.3 bits (77), Expect = 4.0 Identities = 20/64 (31%), Positives = 31/64 (48%) Frame = -2
Query: 354 KCMFMQSLRADLKVKVVLKRPLTFEDAVSIAKHKEWKLERVRQFGLEGDMEPNVTIWIDV 175 K F + A ++ V RPL F D +S+ +K WKL EGDM P +D Sbjct: 234 KFRFFVAFHASIQGFVHGCRPLLFLDVISVKPNKHWKLLAATSVDGEGDMFPVALSVVDD 293
Query: 174 DTKK 163 ++++ Sbjct: 294 ESQE 297
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