BP912646 |
Clone id |
YMU001_000021_C08 |
Library |
YMU01 |
Length |
475 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_C08. |
Accession |
BP912646 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GATACCATGCGCGGTGGGCTCAAGTGATGGGTGCATCTGAAGGGATTCTCAGGCACAAAT GCATACATCTTCTAGCTTACATTGCAAGAGAAGGCCTCGTGCGAAATTCAAGTAGTATTG GAAAAGCCAGCTTTTGTTGCTATCCTACTACCAAAGAAGAAGTACGCCTACAGAGATTGT CTTCTCCTTTAAAAACCATGGGTGGTTGGTTTGGTCTTGCTGCCAAAGGCGTCTGTATGA TGAGCAGATTTTCTGTGTTTGAAACAAATAGTCAGGCTTCTCTGTCTCTGCTGCCTAAAA TGTCCTATGCACAATCTCAAGTGGACAGTGTACTTCCAACAATTTACTCAGATTCCATTG CTGTATATGTCTACAGAATATCCCTGTTGTTATTAGAAGTCTTATGCAGGCAAGCACATC ATATCGTCATGGTTATGAGTGAGGGCGCTGCACACAACTACAATATCCTTCCAGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q3JFK2 |
Definition |
sp|Q3JFK2|ASPD_BURP1 Probable L-aspartate dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) |
Align length |
95 |
Score (bit) |
30.8 |
E-value |
3.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912646|Adiantum capillus-veneris mRNA, clone: YMU001_000021_C08. (475 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q3JFK2|ASPD_BURP1 Probable L-aspartate dehydrogenase OS=Burkh... 31 3.2 sp|P50806|VL1_BPV5 Major capsid protein L1 OS=Bovine papillomavi... 31 3.2 sp|Q63LV9|ASPD_BURPS Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|A3NIZ0|ASPD_BURP6 Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|A3P4L6|ASPD_BURP0 Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|A1UVC0|ASPD_BURMS Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|Q62BI3|ASPD_BURMA Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|A2RXI5|ASPD_BURM9 Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|A3MD35|ASPD_BURM7 Probable L-aspartate dehydrogenase OS=Burkh... 30 4.2 sp|Q6HJZ3|KHSE_BACHK Homoserine kinase OS=Bacillus thuringiensis... 30 7.1 sp|Q63CI8|KHSE_BACCZ Homoserine kinase OS=Bacillus cereus (strai... 30 7.1 sp|Q739T5|KHSE_BACC1 Homoserine kinase OS=Bacillus cereus (strai... 30 7.1 sp|A0RCX4|KHSE_BACAH Homoserine kinase OS=Bacillus thuringiensis... 30 7.1 sp|Q81RS0|KHSE_BACAN Homoserine kinase OS=Bacillus anthracis GN=... 29 9.3
>sp|Q3JFK2|ASPD_BURP1 Probable L-aspartate dehydrogenase OS=Burkholderia pseudomallei (strain 1710b) GN=nadX PE=3 SV=1 Length = 271
Score = 30.8 bits (68), Expect = 3.2 Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V TI + + R+ L+ + R H IV Sbjct: 194 -NVAATIALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|P50806|VL1_BPV5 Major capsid protein L1 OS=Bovine papillomavirus type 5 GN=L1 PE=3 SV=2 Length = 494
Score = 30.8 bits (68), Expect = 3.2 Identities = 13/39 (33%), Positives = 24/39 (61%) Frame = -2
Query: 381 IFCRHIQQWNLSKLLEVHCPLEIVHRTF*AAETEKPDYL 265 I+CRH++++ L+ +LE+ C +E+ T +T P L Sbjct: 358 IYCRHVEEYKLAVILEL-CSVELTSETVAYLQTVNPSVL 395
>sp|Q63LV9|ASPD_BURPS Probable L-aspartate dehydrogenase OS=Burkholderia pseudomallei GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|A3NIZ0|ASPD_BURP6 Probable L-aspartate dehydrogenase OS=Burkholderia pseudomallei (strain 668) GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|A3P4L6|ASPD_BURP0 Probable L-aspartate dehydrogenase OS=Burkholderia pseudomallei (strain 1106a) GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|A1UVC0|ASPD_BURMS Probable L-aspartate dehydrogenase OS=Burkholderia mallei (strain SAVP1) GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|Q62BI3|ASPD_BURMA Probable L-aspartate dehydrogenase OS=Burkholderia mallei GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|A2RXI5|ASPD_BURM9 Probable L-aspartate dehydrogenase OS=Burkholderia mallei (strain NCTC 10229) GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|A3MD35|ASPD_BURM7 Probable L-aspartate dehydrogenase OS=Burkholderia mallei (strain NCTC 10247) GN=nadX PE=3 SV=1 Length = 271
Score = 30.4 bits (67), Expect = 4.2 Identities = 23/95 (24%), Positives = 42/95 (44%), Gaps = 4/95 (4%) Frame = +3
Query: 156 EEVRLQRLSSPLKTMGGWFGLAAKGVC----MMSRFSVFETNSQASLSLLPKMSYAQSQV 323 +EVR PL GW G A+ +C M + ++FE +++ + L P+ + Sbjct: 144 DEVRYIGRKPPL----GWLGTPAEAICDLRAMAAEQTIFEGSARDAAQLYPRNA------ 193
Query: 324 DSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIV 428 +V T+ + + R+ L+ + R H IV Sbjct: 194 -NVAATVALAGVGLDATRVCLIADPAVTRNVHRIV 227
>sp|Q6HJZ3|KHSE_BACHK Homoserine kinase OS=Bacillus thuringiensis subsp. konkukian GN=thrB PE=3 SV=1 Length = 297
Score = 29.6 bits (65), Expect = 7.1 Identities = 18/61 (29%), Positives = 29/61 (47%) Frame = +3
Query: 261 ETNSQASLSLLPKMSYAQSQVDSVLPTIYSDSIAVYVYRISLLLLEVLCRQAHHIVMVMS 440 E+ +SL+P + SVLP ++ AV IS +L+ LC++ +V M Sbjct: 152 ESKELGVISLIPNEELNTDESRSVLPDVFPFHEAVKASAISNVLVAALCQKKWEVVGEMM 211
Query: 441 E 443 E Sbjct: 212 E 212
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9TI81 |
Definition |
tr|A9TI81|A9TI81_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
173 |
Score (bit) |
73.2 |
E-value |
6.0e-12 |
Report |
|