BP912650
Clone id YMU001_000021_C12
Library
Length 526
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCTCTTTTTGATTGGGGTCAGAGACCTTACAACCTCCCCAACATGAAAAATTGAGATGT
CCTCATCTCAAGAATGTGCTTGGGTAATCCTTTATTAGCGTTGGTTCGTCCTCCCAAGTT
GCATCTTCTTCAGGGTAATCCTTCCACTTTACCAGATGCTCCGTGATAGTTCTGTTGCGT
AACTTCCTTTCCCTTGTTTCTAGTACCTAGTCAGGTTGGAGCTCGAGAACTCCTTGTGCT
GGCATGACTATCTGATCTGAGTCCAAGAATTGATCAGGGTTAGGAATATAGGGTTTGAGT
AAGCTGACGTGGAATACATCATGAACCTTCAAGTTTGCAGGTAACTTTCGCTTGTAGGCT
TGGTCACTCACAACCTTAACGATCTCGAATGGTCCACAATACCTTGGGCTTAGCTTCTTA
TATCTGCCTAGAGATAAGTTGCTTTTCTTTGGTCGGACTCGTAGAAAAACCTTATCTCCT
TCTTTGAAAGTTCTGTCCGAACGGTTCTTATCTGCCTTTGCACTCG
■■Homology search results ■■ -
sp_hit_id Q99315
Definition sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae
Align length 54
Score (bit) 48.1
E-value 2.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912650|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_C12.
(526 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 48 2e-05
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 42 0.002
sp|Q6AYK9|CDYL_RAT Chromodomain Y-like protein OS=Rattus norvegi... 42 0.002
sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus... 39 0.020
sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapien... 38 0.033
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 35 0.22
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 35 0.22
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 35 0.22
sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4... 35 0.22
sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4... 35 0.22
sp|Q9Y6F7|CDY2_HUMAN Testis-specific chromodomain protein Y 2 OS... 35 0.22
sp|Q9Y6F8|CDY1_HUMAN Testis-specific chromodomain protein Y 1 OS... 35 0.22
sp|Q22516|CHD3_CAEEL Chromodomain-helicase-DNA-binding protein 3... 34 0.48
sp|P05205|HP1_DROME Heterochromatin protein 1 OS=Drosophila mela... 33 0.63
sp|Q9P2D1|CHD7_HUMAN Chromodomain-helicase-DNA-binding protein 7... 33 0.63
sp|P83917|CBX1_MOUSE Chromobox protein homolog 1 OS=Mus musculus... 33 0.82
sp|P83916|CBX1_HUMAN Chromobox protein homolog 1 OS=Homo sapiens... 33 0.82
sp|Q12873|CHD3_HUMAN Chromodomain-helicase-DNA-binding protein 3... 33 1.1
sp|Q339W7|LHP1_ORYSJ Probable chromo domain-containing protein L... 32 1.4
sp|Q8TD26|CHD6_HUMAN Chromodomain-helicase-DNA-binding protein 6... 32 1.4
sp|P60889|CBX7_RAT Chromobox protein homolog 7 OS=Rattus norvegi... 32 1.4
sp|Q8VDS3|CBX7_MOUSE Chromobox protein homolog 7 OS=Mus musculus... 32 1.4
sp|O95931|CBX7_HUMAN Chromobox protein homolog 7 OS=Homo sapiens... 32 1.4
sp|O15027|SC16A_HUMAN Protein transport protein Sec16A OS=Homo s... 32 1.4
sp|Q9US25|HRP1_SCHPO Chromodomain helicase hrp1 OS=Schizosacchar... 32 2.4
sp|P45973|CBX5_HUMAN Chromobox protein homolog 5 OS=Homo sapiens... 32 2.4
sp|Q5RB81|SUV91_PONAB Histone-lysine N-methyltransferase SUV39H1... 31 3.1
sp|O43463|SUV91_HUMAN Histone-lysine N-methyltransferase SUV39H1... 31 3.1
sp|Q2NL30|SUV91_BOVIN Histone-lysine N-methyltransferase SUV39H1... 31 3.1
sp|Q944N1|LHP1_SOLLC Chromo domain protein LHP1 OS=Solanum lycop... 31 3.1

>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547

Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/54 (38%), Positives = 32/54 (59%)
Frame = -3

Query: 428 GRYKKLSPRYCGPFEIVKVVSDQAYKRKLPANLKVHDVFHVSLLKPYIPNPDQF 267
G Y K+ Y GPF +VK ++D AY+ L ++ K H V +V LK ++ PD +
Sbjct: 1398 GAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLKKFVYRPDAY 1451


>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498

Score = 41.6 bits (96), Expect = 0.002
Identities = 19/45 (42%), Positives = 27/45 (60%)
Frame = -3

Query: 428 GRYKKLSPRYCGPFEIVKVVSDQAYKRKLPANLKVHDVFHVSLLK 294
G Y K+ Y GPF +VK ++D AY+ L ++ K H V +V LK
Sbjct: 1424 GAYMKVQQIYVGPFRVVKKINDNAYELDLNSHKKKHRVINVQFLK 1468


>sp|Q6AYK9|CDYL_RAT Chromodomain Y-like protein OS=Rattus norvegicus
GN=Cdyl PE=2 SV=1
Length = 589

Score = 41.6 bits (96), Expect = 0.002
Identities = 25/62 (40%), Positives = 34/62 (54%)
Frame = -3

Query: 278 PDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITEHLVKWKDYPEEDATWEDEPT 99
P D DQ V PA E Q + +++ R+ K + TE+LV+WK Y ED TWE E
Sbjct: 37 PATVSDPDQ-VSPAVQDAETQVESIVDKRKNK---KGKTEYLVRWKGYDSEDDTWEPEQH 92

Query: 98 LI 93
L+
Sbjct: 93 LV 94


>sp|Q9WTK2|CDYL_MOUSE Chromodomain Y-like protein OS=Mus musculus
GN=Cdyl PE=1 SV=1
Length = 593

Score = 38.5 bits (88), Expect = 0.020
Identities = 23/65 (35%), Positives = 33/65 (50%)
Frame = -3

Query: 287 IPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITEHLVKWKDYPEEDATWED 108
+ PDQ PA E Q + +++ R+ K + TE+LV+WK Y ED TWE
Sbjct: 41 VSEPDQ-------ASPAIQDAETQVESIVDKRKNK---KGKTEYLVRWKGYDSEDDTWEP 90

Query: 107 EPTLI 93
E L+
Sbjct: 91 EQHLV 95


>sp|Q9Y232|CDYL1_HUMAN Chromodomain Y-like protein OS=Homo sapiens
GN=CDYL PE=1 SV=2
Length = 598

Score = 37.7 bits (86), Expect = 0.033
Identities = 20/49 (40%), Positives = 29/49 (59%)
Frame = -3

Query: 239 AQGVLELQPD*VLETRERKLRNRTITEHLVKWKDYPEEDATWEDEPTLI 93
AQ LQ + +++ R+ K + TE+LV+WK Y ED TWE E L+
Sbjct: 55 AQQPPALQVERIVDKRKNK---KGKTEYLVRWKGYDSEDDTWEPEQHLV 100


>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333

Score = 35.0 bits (79), Expect = 0.22
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3

Query: 488 FKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPANLK--VHDV 315
F+ GD V ++ + L + KL+P + GPF +++ Y+ LP ++K
Sbjct: 1192 FQPGDLVMVK---RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSST 1248

Query: 314 FHVSLLKPYIPNPD 273
FHVS L+ Y N +
Sbjct: 1249 FHVSHLEKYRHNSE 1262


>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333

Score = 35.0 bits (79), Expect = 0.22
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3

Query: 488 FKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPANLK--VHDV 315
F+ GD V ++ + L + KL+P + GPF +++ Y+ LP ++K
Sbjct: 1192 FQPGDLVMVK---RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSST 1248

Query: 314 FHVSLLKPYIPNPD 273
FHVS L+ Y N +
Sbjct: 1249 FHVSHLEKYRHNSE 1262


>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333

Score = 35.0 bits (79), Expect = 0.22
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3

Query: 488 FKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPANLK--VHDV 315
F+ GD V ++ + L + KL+P + GPF +++ Y+ LP ++K
Sbjct: 1192 FQPGDLVMVK---RTKTGFLHKSNKLAPSFAGPFYVLQKSGPNNYELDLPDSIKHMFSST 1248

Query: 314 FHVSLLKPYIPNPD 273
FHVS L+ Y N +
Sbjct: 1249 FHVSHLEKYRHNSE 1262


>sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4
OS=Mus musculus GN=Chd4 PE=1 SV=1
Length = 1915

Score = 35.0 bits (79), Expect = 0.22
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDY 84
+L+KW+D P + A+WE E I+DY
Sbjct: 633 YLIKWRDLPYDQASWESEDVEIQDY 657


>sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4
OS=Homo sapiens GN=CHD4 PE=1 SV=1
Length = 1912

Score = 35.0 bits (79), Expect = 0.22
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDY 84
+L+KW+D P + A+WE E I+DY
Sbjct: 640 YLIKWRDLPYDQASWESEDVEIQDY 664


tr_hit_id Q6F2D6
Definition tr|Q6F2D6|Q6F2D6_SOLDE Putative polyprotein, identical OS=Solanum demissum
Align length 149
Score (bit) 115.0
E-value 1.0e-24
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912650|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_C12.
(526 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q6F2D6|Q6F2D6_SOLDE Putative polyprotein, identical OS=Solanu... 115 1e-24
tr|Q6UUR9|Q6UUR9_ORYSJ Putative gag-pol protein OS=Oryza sativa ... 115 2e-24
tr|Q0J6I3|Q0J6I3_ORYSJ Os08g0317200 protein OS=Oryza sativa subs... 115 2e-24
tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1 114 4e-24
tr|Q2R1B6|Q2R1B6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 113 7e-24
tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris ... 112 1e-23
tr|Q0KIJ4|Q0KIJ4_SOLTU Polyprotein, putative (Fragment) OS=Solan... 111 2e-23
tr|Q8RU68|Q8RU68_ORYSA Putative 22 kDa kafirin cluster; Ty3-Gyps... 110 4e-23
tr|Q7G6A5|Q7G6A5_ORYSJ Putative 22 kDa kafirin cluster; Ty3-Gyps... 110 4e-23
tr|Q33AC0|Q33AC0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 110 4e-23
tr|Q6L428|Q6L428_SOLDE Putative integrase, identical OS=Solanum ... 109 9e-23
tr|Q7X8C9|Q7X8C9_ORYSJ OSJNBb0016B03.9 protein OS=Oryza sativa s... 108 2e-22
tr|Q2QVX7|Q2QVX7_ORYSJ Retrotransposon protein, putative, Ty3-gy... 108 2e-22
tr|A5BRB4|A5BRB4_VITVI Putative uncharacterized protein OS=Vitis... 108 2e-22
tr|Q5WML8|Q5WML8_ORYSJ Putative polyprotein OS=Oryza sativa subs... 107 3e-22
tr|Q33AB0|Q33AB0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 107 3e-22
tr|Q10LB0|Q10LB0_ORYSJ Retrotransposon protein, putative, Ty3-gy... 107 3e-22
tr|Q01LV8|Q01LV8_ORYSA OSIGBa0139I12.6 protein OS=Oryza sativa G... 107 4e-22
tr|A5C7C2|A5C7C2_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22
tr|A5BBP7|A5BBP7_VITVI Putative uncharacterized protein OS=Vitis... 107 4e-22
tr|Q8LLZ2|Q8LLZ2_ORYSJ Putative retroelement (Retrotransposon pr... 107 5e-22
tr|Q7XXH5|Q7XXH5_ORYSJ OSJNBa0059H15.14 protein (OSJNBa0070D17.1... 107 5e-22
tr|Q7XL39|Q7XL39_ORYSJ OSJNBa0056L23.18 protein OS=Oryza sativa ... 107 5e-22
tr|Q10LD3|Q10LD3_ORYSJ Retrotransposon protein, putative, Ty3-gy... 107 5e-22
tr|Q01LT1|Q01LT1_ORYSA OSIGBa0161P06.1 protein OS=Oryza sativa G... 107 5e-22
tr|Q8SB51|Q8SB51_ORYSJ Putative polyprotein (Retrotransposon pro... 106 6e-22
tr|Q8LNB4|Q8LNB4_ORYSJ Putative retroelement (Retrotransposon pr... 106 6e-22
tr|Q53M81|Q53M81_ORYSJ Retrotransposon protein, putative, Ty3-gy... 106 6e-22
tr|Q10LB6|Q10LB6_ORYSJ Retrotransposon protein, putative, Ty3-gy... 106 6e-22
tr|Q01N30|Q01N30_ORYSA OSIGBa0124C14.1 protein OS=Oryza sativa G... 106 6e-22

>tr|Q6F2D6|Q6F2D6_SOLDE Putative polyprotein, identical OS=Solanum
demissum GN=SDM1_49t00014 PE=4 SV=2
Length = 1771

Score = 115 bits (289), Expect = 1e-24
Identities = 61/149 (40%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD+ R F GD+VFLRV P K + GR KLSPRY GPFEI++ V + AY+ LP
Sbjct: 1617 ADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPP 1676

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
+H VFHVS+L+ Y+P+ L D + + + +P +L R+LR+R I
Sbjct: 1677 VFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAILARDVRRLRSRAIPV 1736

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
V+W+ P E+ATWE E + + +PS F
Sbjct: 1737 VKVRWRHRPVEEATWETEQEMREQFPSLF 1765


>tr|Q6UUR9|Q6UUR9_ORYSJ Putative gag-pol protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0079I01.17 PE=4 SV=1
Length = 552

Score = 115 bits (287), Expect = 2e-24
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R D F GD+V LRV P K + G KLSPRY GPF I V AY+ +LP
Sbjct: 397 ADTRRRDLEFAVGDQVLLRVSPTKGIVRFGTTGKLSPRYIGPFVITARVGSLAYRLQLPE 456

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
++ VHDVFHVS+L+ Y+ +P+ +D + I++ +E +P + + ER +R RTI
Sbjct: 457 SMNGVHDVFHVSMLRKYLRDPEHKIDLEPIMVEQDLTIECRPVRIFDWSERVMRRRTIKY 516

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTFL 69
V W + E +ATWE E + K YP F+
Sbjct: 517 VKVLWTNQSEREATWELEEEMKKKYPELFV 546


>tr|Q0J6I3|Q0J6I3_ORYSJ Os08g0317200 protein OS=Oryza sativa subsp.
japonica GN=Os08g0317200 PE=4 SV=1
Length = 365

Score = 115 bits (287), Expect = 2e-24
Identities = 62/150 (41%), Positives = 86/150 (57%), Gaps = 1/150 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R D F GD+V LRV P K + G KLSPRY GPF I V AY+ +LP
Sbjct: 186 ADTRRRDLEFAVGDQVLLRVSPTKGIVRFGTTGKLSPRYIGPFVITARVGSLAYRLQLPE 245

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
++ VHDVFHVS+L+ Y+ +P+ +D + I++ +E +P + + ER +R RTI
Sbjct: 246 SMNGVHDVFHVSMLRKYLRDPEHKIDLEPIMVEQDLTIECRPVRIFDWSERVMRRRTIKY 305

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTFL 69
V W + E +ATWE E + K YP F+
Sbjct: 306 VKVLWTNQSEREATWELEEEMKKKYPELFV 335


>tr|Q84KB0|Q84KB0_CUCME Pol protein OS=Cucumis melo PE=4 SV=1
Length = 923

Score = 114 bits (284), Expect = 4e-24
Identities = 63/149 (42%), Positives = 86/149 (57%), Gaps = 1/149 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R D F+ GDKVFL+V P K L R KLSPR+ GPFEI++ + AY+ LP
Sbjct: 773 ADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERIGPVAYRLALPP 832

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
+L VHDVFHVS+L+ Y+P+P +D + + + QP VL + LRN+ I
Sbjct: 833 SLSTVHDVFHVSMLRKYVPDPSHVVDYEPLEIDENLSYVEQPVEVLARGVKTLRNKQIPL 892

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
V W+++ E+ATWE E + YP F
Sbjct: 893 VKVLWRNHRVEEATWEREDDMRSRYPELF 921


>tr|Q2R1B6|Q2R1B6_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os11g39720 PE=4 SV=1
Length = 193

Score = 113 bits (282), Expect = 7e-24
Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 1/149 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R + F+ GD+V L+V P K + G KLSPRY GPF IV+ V AY+ +LP
Sbjct: 35 ADVRRRELEFEVGDQVLLKVSPTKGVVRFGTKDKLSPRYIGPFLIVERVGILAYRLELPE 94

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
++K VHDVFH+S+L+ Y+ +P+ + + + + E +P +LE ER LR+RTI
Sbjct: 95 SMKGVHDVFHISMLRKYLRDPEHHITVESVTIGQDLTFESRPVRILEESERVLRHRTIKY 154

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
V W E +ATWE E + + YP F
Sbjct: 155 VKVLWTHQTEREATWELESQMREKYPELF 183


>tr|A2I5E5|A2I5E5_BETVU Retrotransposon protein OS=Beta vulgaris PE=4
SV=1
Length = 1501

Score = 112 bits (280), Expect = 1e-23
Identities = 60/152 (39%), Positives = 90/152 (59%), Gaps = 3/152 (1%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R + F GDKVFL+V P K + G+ KLS +Y GP+EI++ + AY+ LP
Sbjct: 1341 ADLKRREDEFAVGDKVFLKVSPTKGVMRFGKKGKLSAKYVGPYEILERIGKVAYRLALPM 1400

Query: 335 NL-KVHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
K+HDVFH+S LK YIP+ L+ +++ + + E +P +L+ + R RN+ +
Sbjct: 1401 EFEKMHDVFHISQLKRYIPDERHVLEPERVQIDSSLTYEERPVKILDRKVRSTRNKDV-- 1458

Query: 158 HLVK--WKDYPEEDATWEDEPTLIKDYPSTFL 69
H+VK W ++ E+ATWE E + K YP FL
Sbjct: 1459 HIVKVLWSNHESEEATWEAEEDMKKKYPDLFL 1490


>tr|Q0KIJ4|Q0KIJ4_SOLTU Polyprotein, putative (Fragment) OS=Solanum
tuberosum GN=STB1_57t00001 PE=4 SV=1
Length = 545

Score = 111 bits (277), Expect = 2e-23
Identities = 59/149 (39%), Positives = 84/149 (56%), Gaps = 1/149 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD+ R F GD+VFLRV P K + GR KLSPRY GPFEI++ V + AY+ LP
Sbjct: 223 ADQRRRPLRFSVGDRVFLRVSPMKGVMRFGRRGKLSPRYIGPFEILRTVGEVAYELALPP 282

Query: 335 NLK-VHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
+H VFHVS+L+ Y+P+ L D + + + +P +L R+LR+R I
Sbjct: 283 VFSAIHPVFHVSMLRRYVPDESHVLQYDAVELDDRLTFVEEPVAILARDVRRLRSRAIPV 342

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
V+W+ E+ATWE E + + +P F
Sbjct: 343 VKVRWRHCSVEEATWETEQEMREQFPGLF 371


>tr|Q8RU68|Q8RU68_ORYSA Putative 22 kDa kafirin cluster; Ty3-Gypsy
type OS=Oryza sativa GN=OSJNBa0022D10.4 PE=4 SV=1
Length = 1230

Score = 110 bits (275), Expect = 4e-23
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Frame = -3

Query: 512 DKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLP-A 336
D R D F GD V+L+V P K G KKLSPRY GPF IVK + + AYK KLP A
Sbjct: 1065 DNRRRDLRFDIGDWVYLKVSPMKGVKRFGLGKKLSPRYVGPFAIVKRIGEVAYKVKLPDA 1124

Query: 335 NLKVHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGV-----LELQPD*VLETRERKLRNR 171
+ VHDVFH+S+++ + P SDQ+ +P + + P +L+T++ K RNR
Sbjct: 1125 LIGVHDVFHISMIRKCLRRP-----SDQVEIPMAELRNDLTYQEYPVCILDTKDGKTRNR 1179

Query: 170 TITEHLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
I V+W + +++ATWE E L K+YP F
Sbjct: 1180 NIRFLKVQWSHHTQDEATWEKEDDLQKNYPQFF 1212


>tr|Q7G6A5|Q7G6A5_ORYSJ Putative 22 kDa kafirin cluster; Ty3-Gypsy
type (Retrotransposon protein, putative, Ty3-gypsy
subclass) OS=Oryza sativa subsp. japonica
GN=OSJNAb0075K12.33 PE=4 SV=1
Length = 1230

Score = 110 bits (275), Expect = 4e-23
Identities = 64/153 (41%), Positives = 88/153 (57%), Gaps = 6/153 (3%)
Frame = -3

Query: 512 DKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLP-A 336
D R D F GD V+L+V P K G KKLSPRY GPF IVK + + AYK KLP A
Sbjct: 1065 DNRRRDLRFDIGDWVYLKVSPMKGVKRFGLGKKLSPRYVGPFAIVKRIGEVAYKVKLPDA 1124

Query: 335 NLKVHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGV-----LELQPD*VLETRERKLRNR 171
+ VHDVFH+S+++ + P SDQ+ +P + + P +L+T++ K RNR
Sbjct: 1125 LIGVHDVFHISMIRKCLRRP-----SDQVEIPMAELRNDLTYQEYPVCILDTKDGKTRNR 1179

Query: 170 TITEHLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
I V+W + +++ATWE E L K+YP F
Sbjct: 1180 NIRFLKVQWSHHTQDEATWEKEDDLQKNYPQFF 1212


>tr|Q33AC0|Q33AC0_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g12670 PE=4 SV=1
Length = 1826

Score = 110 bits (275), Expect = 4e-23
Identities = 64/149 (42%), Positives = 85/149 (57%), Gaps = 1/149 (0%)
Frame = -3

Query: 515 ADKNRSDRTFKEGDKVFLRVRPKKSNLSLGRYKKLSPRYCGPFEIVKVVSDQAYKRKLPA 336
AD R D F EGD V+LRV P + KL+PRY GPF I+ + AY+ +LPA
Sbjct: 1666 ADNRRRDLEFAEGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARRGEVAYQLELPA 1725

Query: 335 NL-KVHDVFHVSLLKPYIPNPDQFLDSDQIVMPAQGVLELQPD*VLETRERKLRNRTITE 159
+L VHDVFHVS LK + P + DS+QI + +P +L+T ER+ RNR I
Sbjct: 1726 SLGNVHDVFHVSQLKKCLRVPSEQADSEQIEVREDLTYVERPVKILDTMERRTRNRVIRF 1785

Query: 158 HLVKWKDYPEEDATWEDEPTLIKDYPSTF 72
V+W ++ EE+ATWE E L +P F
Sbjct: 1786 CKVQWSNHAEEEATWEREDELKAAHPDLF 1814