BP912654 |
Clone id |
YMU001_000021_D04 |
Library |
YMU01 |
Length |
490 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_D04. |
Accession |
BP912654 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CCAAGACACCATTCTTCATACGTTCTTGAATACCTTTGTCAACTGCACCGAAGAATTCTT TATGTACTACACCACCAACAACTTCTTCAGCGAATTCGTATTCTTTACCAGCAGCTTCAA CGTCAAGCGGTTCTAAACGAACATATACATGACCGAATTTACCTTTACCACCTGTTTGAC GTACGAATTTACCTTCTTGCTCAACAGTTTTCTTAATCGTTTCACGATAAGCAACCATTG GTTTACCGATATTCGCTTCAACACCGAATTCACGCTTCATACGGTCAACGATGATGTCAA GGTGAAGCTCACCCATACCAGCAATAATTGTCTGACCAGATTCTTCATCAGTGTGAACAC GGAATGAAGGGTCTTCTTTAGCCAAACGGCCTAAAGCGATAGACATTTTTTCTTGGTCAG CTTTAGTTATTGGTTCAACCGCTAACTGAATTACTGGATCTGGGAATTCCATATGCTCAA GTGTAATGAT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6FDS6 |
Definition |
sp|Q6FDS6|EFG_ACIAD Elongation factor G OS=Acinetobacter sp. (strain ADP1) |
Align length |
163 |
Score (bit) |
301.0 |
E-value |
1.0e-81 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B2HUQ4 |
Definition |
tr|B2HUQ4|B2HUQ4_ACIBC Translation elongation factor (GTPases) OS=Acinetobacter baumannii (strain ACICU) |
Align length |
163 |
Score (bit) |
315.0 |
E-value |
9.0e-85 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912654|Adiantum capillus-veneris mRNA, clone: YMU001_000021_D04. (490 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B2HUQ4|B2HUQ4_ACIBC Translation elongation factor (GTPases) O... 315 9e-85 tr|B0VTG3|B0VTG3_ACIBS Protein chain elongation factor EF-G, GTP... 315 9e-85 tr|B0V8Y3|B0V8Y3_ACIBY Protein chain elongation factor EF-G, GTP... 315 9e-85 tr|A3M306|A3M306_ACIBT Protein chain elongation factor EF-G GTP-... 315 9e-85 tr|B7I7S1|B7I7S1_ACIBA Translation elongation factor G OS=Acinet... 315 9e-85 tr|B7GYM8|B7GYM8_ACIBA Translation elongation factor G OS=Acinet... 312 5e-84 tr|B8GV61|B8GV61_9GAMM Translation elongation factor 2 (EF-2/EF-... 248 1e-64 tr|A8PNQ7|A8PNQ7_9COXI Translation elongation factor G OS=Ricket... 245 9e-64 tr|Q6Q8Z0|Q6Q8Z0_9GAMM Predicted translation elongation factor G... 238 9e-62 tr|B6BZI5|B6BZI5_9GAMM Translation elongation factor G OS=Nitros... 238 1e-61 tr|A8GYX3|A8GYX3_SHEPA Translation elongation factor G OS=Shewan... 238 1e-61 tr|Q6UCW0|Q6UCW0_9GAMM Predicted translation elongation factor G... 236 6e-61 tr|Q6SG50|Q6SG50_9BACT Translation elongation factor G OS=uncult... 236 6e-61 tr|B2SDY7|B2SDY7_FRATM Translation elongation factor G OS=Franci... 234 2e-60 tr|B0TM15|B0TM15_SHEHH Translation elongation factor G OS=Shewan... 234 2e-60 tr|B8CNC9|B8CNC9_9GAMM Translation elongation factor G:Small GTP... 233 3e-60 tr|A4CFX5|A4CFX5_9GAMM Protein chain elongation factor EF-G, GTP... 233 4e-60 tr|A0XWX6|A0XWX6_9GAMM Protein chain elongation factor EF-G, GTP... 233 5e-60 tr|A9KW99|A9KW99_SHEB9 Translation elongation factor G OS=Shewan... 232 8e-60 tr|A6WHS5|A6WHS5_SHEB8 Translation elongation factor G OS=Shewan... 232 8e-60 tr|A3DB99|A3DB99_SHEB5 Translation elongation factor 2 (EF-2/EF-... 232 8e-60 tr|A0KRM1|A0KRM1_SHESA Translation elongation factor 2 (EF-2/EF-... 232 8e-60 tr|B8EBK8|B8EBK8_9GAMM Translation elongation factor G OS=Shewan... 232 8e-60 tr|A4YBY6|A4YBY6_SHEPC Translation elongation factor 2 (EF-2/EF-... 231 1e-59 tr|A1REB1|A1REB1_SHESW Translation elongation factor 2 (EF-2/EF-... 231 1e-59 tr|A2V648|A2V648_SHEPU Translation elongation factor G OS=Shewan... 231 1e-59 tr|A1S215|A1S215_SHEAM Translation elongation factor 2 (EF-2/EF-... 231 2e-59 tr|B2VK36|B2VK36_ERWT9 Translation elongation factor G OS=Erwini... 230 2e-59 tr|Q02T83|Q02T83_PSEAB Elongation factor G OS=Pseudomonas aerugi... 229 4e-59 tr|A6UZI5|A6UZI5_PSEA7 Translation elongation factor G OS=Pseudo... 229 4e-59
>tr|B2HUQ4|B2HUQ4_ACIBC Translation elongation factor (GTPases) OS=Acinetobacter baumannii (strain ACICU) GN=ACICU_00817 PE=4 SV=1 Length = 712
Score = 315 bits (806), Expect = 9e-85 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|B0VTG3|B0VTG3_ACIBS Protein chain elongation factor EF-G, GTP-binding OS=Acinetobacter baumannii (strain SDF) GN=fusA PE=4 SV=1 Length = 712
Score = 315 bits (806), Expect = 9e-85 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|B0V8Y3|B0V8Y3_ACIBY Protein chain elongation factor EF-G, GTP-binding OS=Acinetobacter baumannii (strain AYE) GN=fusA PE=4 SV=1 Length = 712
Score = 315 bits (806), Expect = 9e-85 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|A3M306|A3M306_ACIBT Protein chain elongation factor EF-G GTP-binding OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=A1S_0868 PE=4 SV=2 Length = 712
Score = 315 bits (806), Expect = 9e-85 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|B7I7S1|B7I7S1_ACIBA Translation elongation factor G OS=Acinetobacter baumannii AB0057 GN=fusA PE=4 SV=1 Length = 712
Score = 315 bits (806), Expect = 9e-85 Identities = 160/163 (98%), Positives = 160/163 (98%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|B7GYM8|B7GYM8_ACIBA Translation elongation factor G OS=Acinetobacter baumannii AB307-0294 GN=fusA PE=4 SV=1 Length = 712
Score = 312 bits (800), Expect = 5e-84 Identities = 159/163 (97%), Positives = 159/163 (97%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFPDPVIQLAVEP TKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG Sbjct: 403 IITLERMEFPDPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGK VRQTGGKGKFGHVYVRLE Sbjct: 463 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKLVRQTGGKGKFGHVYVRLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PLDVEAAGKEYEFAEEVVGGVV KEFFGAVDKGIQERMKNGVL Sbjct: 523 PLDVEAAGKEYEFAEEVVGGVVPKEFFGAVDKGIQERMKNGVL 565
>tr|B8GV61|B8GV61_9GAMM Translation elongation factor 2 (EF-2/EF-G) OS=Thioalkalivibrio sp. HL-EbGR7 GN=Tgr7_2327 PE=4 SV=1 Length = 697
Score = 248 bits (633), Expect = 1e-64 Identities = 122/162 (75%), Positives = 141/162 (87%) Frame = -1
Query: 487 ITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGE 308 + LE MEFPDPVI +AVEP TK DQEKM +AL +LA+EDPSFRVHTDEESGQTII+GMGE Sbjct: 403 VILERMEFPDPVISVAVEPKTKGDQEKMGLALNKLAQEDPSFRVHTDEESGQTIISGMGE 462
Query: 307 LHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEP 128 LHL+IIVDRMKREF VEAN+GKP VAYRETI+KT+EQEGKFVRQ+GG+G+FGHV++R+EP Sbjct: 463 LHLEIIVDRMKREFKVEANVGKPQVAYRETIRKTIEQEGKFVRQSGGRGQFGHVWIRIEP 522
Query: 127 LDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 + AG YEF VVGGVV KE+ AVDKGIQE+MKNGVL Sbjct: 523 ---KEAGTGYEFENAVVGGVVPKEYIPAVDKGIQEQMKNGVL 561
>tr|A8PNQ7|A8PNQ7_9COXI Translation elongation factor G OS=Rickettsiella grylli GN=fusA PE=4 SV=1 Length = 704
Score = 245 bits (625), Expect = 9e-64 Identities = 120/163 (73%), Positives = 144/163 (88%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 IITLE MEFP+PVI +AVEP TKADQEKMSIAL +LA+EDPSFRV DEESGQTII+GMG Sbjct: 403 IITLERMEFPEPVISVAVEPKTKADQEKMSIALSKLAQEDPSFRVRVDEESGQTIISGMG 462
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHL+IIVDRMKREF VEAN+GKP VAYRETI+K VEQEGKFVRQ+GG+G++GHV+++LE Sbjct: 463 ELHLEIIVDRMKREFSVEANVGKPQVAYRETIRKPVEQEGKFVRQSGGRGQYGHVWIKLE 522
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 PL+ AGK YEF +VGGVV +E+ AVDKGI+E+++NGV+ Sbjct: 523 PLE---AGKGYEFENAIVGGVVPREYIPAVDKGIKEQLENGVI 562
>tr|Q6Q8Z0|Q6Q8Z0_9GAMM Predicted translation elongation factor G OS=uncultured marine gamma proteobacterium EBAC20E09 GN=Red20E09_81 PE=4 SV=1 Length = 700
Score = 238 bits (608), Expect = 9e-62 Identities = 115/162 (70%), Positives = 144/162 (88%) Frame = -1
Query: 487 ITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGE 308 I LE M+FP+PVI +AVEP +K DQEKMS+ALG+LA+EDPSFRV +DEESGQTII+GMGE Sbjct: 407 IVLERMDFPEPVISVAVEPKSKQDQEKMSLALGKLAQEDPSFRVASDEESGQTIISGMGE 466
Query: 307 LHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEP 128 LHLD++VDRMKREF VEANIGKP VAYRETIK+TVE EGKFVRQ+GGKG++GHV+++LEP Sbjct: 467 LHLDVLVDRMKREFSVEANIGKPQVAYRETIKETVEVEGKFVRQSGGKGQYGHVWLKLEP 526
Query: 127 LDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 L ++ EYEF +++VGGV+ KE+ AV+KGIQE+M+NGV+ Sbjct: 527 LGLD---DEYEFVDKIVGGVIPKEYIPAVNKGIQEQMQNGVI 565
>tr|B6BZI5|B6BZI5_9GAMM Translation elongation factor G OS=Nitrosococcus oceani AFC27 GN=NOC27_1767 PE=4 SV=1 Length = 697
Score = 238 bits (607), Expect = 1e-61 Identities = 115/163 (70%), Positives = 141/163 (86%) Frame = -1
Query: 490 IITLEHMEFPDPVIQLAVEPITKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMG 311 II LE MEFP+PVI +A+EP TK DQE+MSIALG+LA+EDPSFRV TDEESGQTIIAGMG Sbjct: 401 IILLERMEFPEPVISVAIEPKTKGDQERMSIALGKLAREDPSFRVRTDEESGQTIIAGMG 460
Query: 310 ELHLDIIVDRMKREFGVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLE 131 ELHLDIIVDRM+REF VEAN+G P VAYRETI++++EQEGKFVRQ+GG+G++GHV+++LE Sbjct: 461 ELHLDIIVDRMRREFKVEANVGAPQVAYRETIRRSIEQEGKFVRQSGGRGQYGHVWLKLE 520
Query: 130 PLDVEAAGKEYEFAEEVVGGVVHKEFFGAVDKGIQERMKNGVL 2 P + GK YEF ++VGG V KEF AVDKGI+E+ +NGV+ Sbjct: 521 P---QERGKGYEFVNKIVGGTVPKEFIPAVDKGIKEQTENGVI 560
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