BP912656
Clone id YMU001_000021_D06
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCAATACGCCGGCTTGAGGAGAGAGTTTCATCACAAAAGTAAGGGGATTAGATCATCGT
TTGAAGAAATCTTTGGGCTTCACACTTGGTGCATGATCCTATGAAGAGAGCATGATGCCA
TGGACCTTGAACAGTAAGCCCTTAGATATCTATAGAAAGTTGGGTTGTCGTCTGCGAGAA
CTGGCACACTGTTTTGCCTAGGGCTTACTAACTCATAATTTTTGTTTGTGATTATATTGA
GAGATTGAATTTAAAGTAATCTGTCATAGGTTTCCACAGATCAATAGAAGTCAAGGTTCG
CATTGTGTAGCTATCTATTGAAGGCCTACTACCATATGTTGATCTTATGGACAATGGGGC
AGTGGATTCCTTTCGGTGCAAGTGTCATCCCTCTTGCCCTCTACGCATGTTTTGTTTTGT
TCGATTGATAAGGTCTACATGTATATACTGCAACCCACAGCAGTAATCTTTCTGAACTGC
AGAAGTTGAAGTTCTGTTATGTTCTAAATTGCTTCAAACATTGTCCGA
■■Homology search results ■■ -
sp_hit_id Q99LQ7
Definition sp|Q99LQ7|TM189_MOUSE Transmembrane protein 189 OS=Mus musculus
Align length 55
Score (bit) 32.7
E-value 1.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912656|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D06.
(528 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q99LQ7|TM189_MOUSE Transmembrane protein 189 OS=Mus musculus ... 33 1.1
sp|Q8NH09|OR8S1_HUMAN Olfactory receptor 8S1 OS=Homo sapiens GN=... 31 3.2
sp|Q8NH21|OR4F5_HUMAN Olfactory receptor 4F5 OS=Homo sapiens GN=... 30 9.4

>sp|Q99LQ7|TM189_MOUSE Transmembrane protein 189 OS=Mus musculus
GN=Tmem189 PE=2 SV=1
Length = 271

Score = 32.7 bits (73), Expect = 1.1
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Frame = +2

Query: 146 ISIESWVVVCENWHTVLPRAY*LI-------IFVCDYIERLNLK*SVIGFHRSIE 289
+ + WV V ++WH +LPR + I + C LN VIGF R +E
Sbjct: 194 LGLPYWVTVLQDWHVILPRKHHRIHHVAPHETYFCITTGWLNYPLEVIGFWRRLE 248


>sp|Q8NH09|OR8S1_HUMAN Olfactory receptor 8S1 OS=Homo sapiens
GN=OR8S1 PE=2 SV=1
Length = 359

Score = 31.2 bits (69), Expect = 3.2
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +1

Query: 346 YGQWGSGFLSVQVSSLLPSTHVLFCSIDKVYMYILQPTAVIFLNC 480
+G WG GFL ++ LL + +++FC ++ Y + +++ L+C
Sbjct: 146 WGSWGLGFLDALINVLL-AVNMVFCEAKIIHHYSYEMPSLLPLSC 189


>sp|Q8NH21|OR4F5_HUMAN Olfactory receptor 4F5 OS=Homo sapiens
GN=OR4F5 PE=2 SV=1
Length = 305

Score = 29.6 bits (65), Expect = 9.4
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +1

Query: 355 WGSGFLSVQVSSLLPSTHVLFCSIDKVYMYILQPTAVIFLNC 480
WG GFL VS L + H+LFC ++V + VI L C
Sbjct: 142 WGIGFLH-SVSQLAFAVHLLFCGPNEVDSFYCDLPRVIKLAC 182


tr_hit_id B0BN29
Definition tr|B0BN29|B0BN29_RAT Tmem189 protein OS=Rattus norvegicus
Align length 75
Score (bit) 33.9
E-value 5.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912656|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D06.
(528 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B0BN29|B0BN29_RAT Tmem189 protein OS=Rattus norvegicus GN=Tme... 34 5.2

>tr|B0BN29|B0BN29_RAT Tmem189 protein OS=Rattus norvegicus
GN=Tmem189 PE=2 SV=1
Length = 271

Score = 33.9 bits (76), Expect = 5.2
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Frame = +2

Query: 146 ISIESWVVVCENWHTVLPRAY*LI-------IFVCDYIERLNLK*SVIGFHRSIEVKVRI 304
+ + WV V ++WH +LPR + I + C LN VIGF R +E ++
Sbjct: 194 LGLPCWVTVLQDWHVILPRKHHRIHHVAPHETYFCITTGWLNYPLEVIGFWRRLEDVIQ- 252

Query: 305 V*LSIEGLLPYVDLM 349
S+ G P D M
Sbjct: 253 ---SLTGEKPRADDM 264