BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912658|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D08.
         (402 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A8YUC4|SECA_LACH4 Protein translocase subunit secA OS=Lactoba...    32   0.75 
sp|Q5A970|MRS2_CANAL Mitochondrial inner membrane magnesium tran...    32   1.3  
sp|Q5FL75|SECA_LACAC Protein translocase subunit secA OS=Lactoba...    30   2.8  
sp|Q86JD4|SEC11_DICDI Signal peptidase complex catalytic subunit...    30   2.8  
sp|Q9BY15|EMR3_HUMAN EGF-like module-containing mucin-like hormo...    30   3.7  
sp|Q7T0S2|NUDC1_XENLA NudC domain-containing protein 1 OS=Xenopu...    30   4.9  
sp|O14187|SPP42_SCHPO Pre-mRNA-splicing factor spp42 OS=Schizosa...    29   8.3  

>sp|A8YUC4|SECA_LACH4 Protein translocase subunit secA
           OS=Lactobacillus helveticus (strain DPC 4571) GN=secA
           PE=3 SV=1
          Length = 799

 Score = 32.3 bits (72), Expect = 0.75
 Identities = 21/66 (31%), Positives = 31/66 (46%)
 Frame = +3

Query: 36  WHLRGLMGFLSLKVTCMFRDGKIDLKSIPCFHLHQEITSVAETSLEDLQAKLQEGALHDP 215
           W L  L  F+S  +T       ID K+I    L +++  + E + ED     +E AL DP
Sbjct: 664 WRLDSLRDFISSSLTSEQVTDSIDFKTISVEDLKKKLYDIVEKNFED-----KEKALGDP 718

Query: 216 SLYLPY 233
           S  L +
Sbjct: 719 SQMLEF 724


>sp|Q5A970|MRS2_CANAL Mitochondrial inner membrane magnesium
           transporter mrs2 OS=Candida albicans GN=MRS2 PE=3 SV=1
          Length = 468

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +2

Query: 86  VSRWKN*SKIYTLFSSTSGNYKCGRNKFGRPAGK 187
           V RWK  S +Y LF  + G Y     KF RP  +
Sbjct: 419 VDRWKRGSFLYRLFYGSGGKYSKPSKKFDRPTNR 452


>sp|Q5FL75|SECA_LACAC Protein translocase subunit secA
           OS=Lactobacillus acidophilus GN=secA PE=3 SV=1
          Length = 799

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 20/66 (30%), Positives = 30/66 (45%)
 Frame = +3

Query: 36  WHLRGLMGFLSLKVTCMFRDGKIDLKSIPCFHLHQEITSVAETSLEDLQAKLQEGALHDP 215
           W L  L  F+S  +        ID K+I    L +++  + E + ED     +E AL DP
Sbjct: 664 WRLDSLRDFISSSLASEQVTDSIDFKTISVEDLKKKLYDIVEKNFED-----KEKALGDP 718

Query: 216 SLYLPY 233
           S  L +
Sbjct: 719 SQMLEF 724


>sp|Q86JD4|SEC11_DICDI Signal peptidase complex catalytic subunit
           sec11 OS=Dictyostelium discoideum GN=sec11 PE=3 SV=1
          Length = 179

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/54 (33%), Positives = 25/54 (46%)
 Frame = +3

Query: 99  KIDLKSIPCFHLHQEITSVAETSLEDLQAKLQEGALHDPSLYLPYNVWLHKSHL 260
           KI+ K IP  H   +I    E  L D++ K     + D  LY P   WL + H+
Sbjct: 86  KIEGKEIPIVHRILQIHE-KEDGLYDIRTKGDNNNVDDVGLYSPGQRWLSRDHI 138


>sp|Q9BY15|EMR3_HUMAN EGF-like module-containing mucin-like hormone
           receptor-like 3 OS=Homo sapiens GN=EMR3 PE=1 SV=1
          Length = 652

 Score = 30.0 bits (66), Expect = 3.7
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 138 QEITSVAETSLEDLQAKLQEGALHDP 215
           QEI+S A T L D+++K+ E AL DP
Sbjct: 155 QEISSTATTILRDVESKVLETALKDP 180


>sp|Q7T0S2|NUDC1_XENLA NudC domain-containing protein 1 OS=Xenopus
           laevis GN=nudcd1 PE=2 SV=1
          Length = 586

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 19/61 (31%), Positives = 28/61 (45%)
 Frame = +3

Query: 87  FRDGKIDLKSIPCFHLHQEITSVAETSLEDLQAKLQEGALHDPSLYLPYNVWLHKSHLEI 266
           F   K+ L  +PC+++  +  +VAE +L D Q  L          YL  N WL  S   I
Sbjct: 19  FESYKLSLDPLPCYNVELD-AAVAEVTLRDDQYTLDHMRAFGMYNYLHCNPWLPNSVFYI 77

Query: 267 E 269
           +
Sbjct: 78  D 78


>sp|O14187|SPP42_SCHPO Pre-mRNA-splicing factor spp42
           OS=Schizosaccharomyces pombe GN=spp42 PE=1 SV=1
          Length = 2363

 Score = 28.9 bits (63), Expect = 8.3
 Identities = 12/46 (26%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = +3

Query: 159 ETSLEDLQAKLQEGALH-DPSLYLPYNVWLHKSHLEIEHSTYACYL 293
           + +L +L    ++ A+  DP+  +P++ + H   +E EH+  A  L
Sbjct: 382 QLTLHELDTSPEDSAIEEDPNFEIPFDPFFHSEDIEFEHTASALIL 427

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912658|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D08.
         (402 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8FP29|A8FP29_CAMJ8 Putative uncharacterized protein OS=Campy...    33   5.4  
tr|A6NRJ0|A6NRJ0_9BACE Putative uncharacterized protein OS=Bacte...    33   5.5  
tr|A3Y8A8|A3Y8A8_9GAMM Quinolinate synthetase OS=Marinomonas sp....    33   7.0  

>tr|A8FP29|A8FP29_CAMJ8 Putative uncharacterized protein
           OS=Campylobacter jejuni subsp. jejuni serotype O:6
           (strain 81116 / NCTC 11828) GN=C8J_1619 PE=4 SV=1
          Length = 342

 Score = 33.5 bits (75), Expect = 5.4
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = -2

Query: 260 KVAFMQPYIVWQI*RRVMECPLLELCLQVFQTCFCHTCNFLM 135
           K  F+Q Y   +I +R+++ P LEL L    T  C +CN LM
Sbjct: 48  KKFFLQKYFEKRIKKRIIDIPYLELVLTTKCTMRCQSCNNLM 89


>tr|A6NRJ0|A6NRJ0_9BACE Putative uncharacterized protein
           OS=Bacteroides capillosus ATCC 29799 GN=BACCAP_00818
           PE=4 SV=1
          Length = 415

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/54 (35%), Positives = 29/54 (53%)
 Frame = +1

Query: 124 VFIYIRKLQVWQKQVWKTCRQSSKRGHSMTLLYICHTMYGCIKATLKSSIPLML 285
           +F+ I + +   K  WKTC   +K G S  LLY+C T +      L ++ PL+L
Sbjct: 35  IFVTITERKGQMKLDWKTC---AKVGVSAFLLYLCITYWPQFTGLLSAATPLLL 85


>tr|A3Y8A8|A3Y8A8_9GAMM Quinolinate synthetase OS=Marinomonas sp.
           MED121 GN=MED121_11800 PE=4 SV=1
          Length = 470

 Score = 33.1 bits (74), Expect = 7.0
 Identities = 21/58 (36%), Positives = 31/58 (53%)
 Frame = +3

Query: 84  MFRDGKIDLKSIPCFHLHQEITSVAETSLEDLQAKLQEGALHDPSLYLPYNVWLHKSH 257
           +F+  K+ L    C +L    +S A+T L DL+A L E +L +PS Y+    W  K H
Sbjct: 3   LFKAFKLGLTLCLCLNL---ASSYADTKLPDLEADLDEQSLSNPS-YIVGQHWFRKLH 56