BP912661 |
Clone id |
YMU001_000021_D11 |
Library |
YMU01 |
Length |
534 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_D11. |
Accession |
BP912661 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TGAGCCACAATACTCCTGGGCAGCTCTATTTTGAGTTTTTTGGTGCCTTCCACGTGGACA CCTTGCATAGAGTCCATAGGACATGCATACTCCAGATTCAAAACATCAGCTTGCTAATAG CAGTTGAAGACCTACCTTCCACCTAACAAGATTGAGTCTCCTGCTAACTTACCTTTTGAT AAATAACGTCCATCCTAATTACTAAGAATAAGCCAATGCAAAGCAGCACCTTGGAACAAA GAACACGCACAAAACATTCTAGCAACCTTTGTTTGTGTTGTTATTGCCATATGTTTGTAT TGAGAATAACAAAAAATGATAGAGAACTCACTCAACAATAAAGCCTAAAGGGCTGTCATT GCCTCCTGGCTAACGTAGCCATGGTAAGCACTAGCCAATGCCATGATACATGCGCCATCT GACAATATAGGTATCACATCTATGATGCATGCTGCCGTCTCTAGCTGACCCGTCCTTCCC AAAAGATCAATTATGCAAACATAATGTGCCACCCCAGGTACAACGCCGAACAAC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9ZVG8 |
Definition |
sp|Q9ZVG8|PPR60_ARATH Pentatricopeptide repeat-containing protein At1g26900, mitochondrial OS=Arabidopsis thaliana |
Align length |
52 |
Score (bit) |
47.8 |
E-value |
3.0e-05 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q75HW7 |
Definition |
tr|Q75HW7|Q75HW7_ORYSJ cDNA, clone: J100062A03, full insert sequence OS=Oryza sativa subsp. japonica |
Align length |
63 |
Score (bit) |
49.3 |
E-value |
0.0001 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912661|Adiantum capillus-veneris mRNA, clone: YMU001_000021_D11. (534 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q75HW7|Q75HW7_ORYSJ cDNA, clone: J100062A03, full insert sequ... 49 1e-04 tr|A7PZB8|A7PZB8_VITVI Chromosome chr15 scaffold_40, whole genom... 49 1e-04 tr|A5C8U0|A5C8U0_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A3B4F7|A3B4F7_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2Y537|A2Y537_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A7PFZ2|A7PFZ2_VITVI Chromosome chr6 scaffold_15, whole genome... 49 2e-04 tr|B8AMA2|B8AMA2_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea m... 48 4e-04 tr|A7QNK0|A7QNK0_VITVI Chromosome chr2 scaffold_132, whole genom... 48 4e-04 tr|Q84TV5|Q84TV5_ORYSJ Putative uncharacterized protein OSJNBa00... 47 5e-04 tr|Q7Y1D6|Q7Y1D6_ORYSJ Putative pentatricopeptide repeat contain... 47 5e-04 tr|Q10BI4|Q10BI4_ORYSJ cDNA clone:J023018C14, full insert sequen... 47 5e-04 tr|Q0DMD0|Q0DMD0_ORYSJ Os03g0816600 protein (Fragment) OS=Oryza ... 47 5e-04 tr|Q0DLJ0|Q0DLJ0_ORYSJ Os03g0861900 protein OS=Oryza sativa subs... 47 5e-04 tr|B8AP69|B8AP69_ORYSI Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|A5AEX5|A5AEX5_VITVI Putative uncharacterized protein OS=Vitis... 47 5e-04 tr|A3AP14|A3AP14_ORYSJ Putative uncharacterized protein OS=Oryza... 47 5e-04 tr|Q6F382|Q6F382_ORYSJ Os03g0795200 protein OS=Oryza sativa subs... 47 6e-04 tr|B8AN26|B8AN26_ORYSI Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A7Q618|A7Q618_VITVI Chromosome chr14 scaffold_54, whole genom... 47 6e-04 tr|A7PX52|A7PX52_VITVI Chromosome chr12 scaffold_36, whole genom... 47 6e-04 tr|A7PD58|A7PD58_VITVI Chromosome chr17 scaffold_12, whole genom... 47 6e-04 tr|A7NYH7|A7NYH7_VITVI Chromosome chr6 scaffold_3, whole genome ... 47 6e-04 tr|A5BUK5|A5BUK5_VITVI Putative uncharacterized protein OS=Vitis... 47 6e-04 tr|A5BP14|A5BP14_VITVI Putative uncharacterized protein OS=Vitis... 47 6e-04 tr|A3ANL0|A3ANL0_ORYSJ Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A2XMV7|A2XMV7_ORYSI Putative uncharacterized protein OS=Oryza... 47 6e-04 tr|A7R8M9|A7R8M9_VITVI Chromosome undetermined scaffold_2768, wh... 47 8e-04 tr|A7PA64|A7PA64_VITVI Chromosome chr14 scaffold_9, whole genome... 47 8e-04 tr|A7PPC3|A7PPC3_VITVI Chromosome chr8 scaffold_23, whole genome... 46 0.001
>tr|Q75HW7|Q75HW7_ORYSJ cDNA, clone: J100062A03, full insert sequence OS=Oryza sativa subsp. japonica GN=OSJNBb0042J17.15 PE=2 SV=1 Length = 551
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Frame = -2
Query: 533 LFGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA--YHGYVSQEA 360 ++GV PGV HY C++DLLGR+GQ+ A ++ +P+ +D +L SA HG V Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 359 MTA 351 + A Sbjct: 442 LAA 444
>tr|A7PZB8|A7PZB8_VITVI Chromosome chr15 scaffold_40, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00026821001 PE=4 SV=1 Length = 871
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/56 (44%), Positives = 34/56 (60%) Frame = -2
Query: 530 FGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASAYHGYVSQE 363 FGVVPG HY C++DLL R G+L+ A +I +P+ A +AL SA Y + E Sbjct: 630 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVE 685
>tr|A5C8U0|A5C8U0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_018821 PE=4 SV=1 Length = 871
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/56 (44%), Positives = 34/56 (60%) Frame = -2
Query: 530 FGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASAYHGYVSQE 363 FGVVPG HY C++DLL R G+L+ A +I +P+ A +AL SA Y + E Sbjct: 630 FGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVE 685
>tr|A3B4F7|A3B4F7_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_017929 PE=4 SV=1 Length = 551
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Frame = -2
Query: 533 LFGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA--YHGYVSQEA 360 ++GV PGV HY C++DLLGR+GQ+ A ++ +P+ +D +L SA HG V Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 359 MTA 351 + A Sbjct: 442 LAA 444
>tr|A2Y537|A2Y537_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_20110 PE=4 SV=1 Length = 551
Score = 49.3 bits (116), Expect = 1e-04 Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 2/63 (3%) Frame = -2
Query: 533 LFGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA--YHGYVSQEA 360 ++GV PGV HY C++DLLGR+GQ+ A ++ +P+ +D +L SA HG V Sbjct: 382 VYGVEPGVEHYGCVVDLLGRSGQIRRALDLVRDMPVPADAKVWGSLLSACRSHGDVDTAV 441
Query: 359 MTA 351 + A Sbjct: 442 LAA 444
>tr|A7PFZ2|A7PFZ2_VITVI Chromosome chr6 scaffold_15, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017309001 PE=4 SV=1 Length = 682
Score = 48.9 bits (115), Expect = 2e-04 Identities = 21/45 (46%), Positives = 30/45 (66%) Frame = -2
Query: 530 FGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMAL 396 +GV P + HY C++D LGR G LE A I+ +P+ +DGA + AL Sbjct: 328 YGVAPELKHYACMVDCLGRAGMLEDAERFIEEMPVEADGAVLGAL 372
>tr|B8AMA2|B8AMA2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_14066 PE=4 SV=1 Length = 628
Score = 48.1 bits (113), Expect = 3e-04 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2
Query: 530 FGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA 387 +G+ P V HY C++DLLGR+G L+ A +I +P+ DG L SA Sbjct: 405 YGIQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 452
>tr|B4F908|B4F908_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 606
Score = 47.8 bits (112), Expect = 4e-04 Identities = 24/51 (47%), Positives = 30/51 (58%) Frame = -2
Query: 527 GVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASAYHGY 375 G+VPG+ HY C+ DLL R+GQLE A ID +PI L SA G+ Sbjct: 365 GIVPGIKHYGCVTDLLARSGQLERAYKFIDELPINPTPILWRTLLSACGGH 415
>tr|A7QNK0|A7QNK0_VITVI Chromosome chr2 scaffold_132, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002558001 PE=4 SV=1 Length = 814
Score = 47.8 bits (112), Expect = 4e-04 Identities = 27/56 (48%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = -2
Query: 533 LFGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA--YHGYV 372 L GVVP + HY C+IDL GR G LE A ID +PI+ D L S HG V Sbjct: 649 LHGVVPCLEHYACMIDLFGRVGLLEDAKRTIDQMPIMPDAQIWQILLSGCNIHGNV 704
>tr|Q84TV5|Q84TV5_ORYSJ Putative uncharacterized protein OSJNBa0094J08.24 OS=Oryza sativa subsp. japonica GN=OSJNBa0094J08.24 PE=4 SV=1 Length = 704
Score = 47.4 bits (111), Expect = 5e-04 Identities = 21/48 (43%), Positives = 30/48 (62%) Frame = -2
Query: 530 FGVVPGVAHYVCIIDLLGRTGQLETAACIIDVIPILSDGACIMALASA 387 +G+ P V HY C++DLLGR+G L+ A +I +P+ DG L SA Sbjct: 471 YGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLSA 518
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