BP912662
Clone id YMU001_000021_D12
Library
Length 559
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTGAAACAAACTTCAATATAACCGACACTACAATGAATTGTTCTTGTGATACACAAAT
TTGCTAAATGTTGAGTTCACAACAACATCAGAATCAGGTGTTCTACACAAGTAACATGCC
CTGCTTTCATTGACTGCATATTTCCAGATTCTGTAGAAGAGCTATATGAAATTCTATGAA
AAAATAAAGACCGATTCCATAATAAAAGCACACATGAGCACAGTGTCAACTATACTTGAT
CAATCCGAAGAAGCAACTCCAAATCTTCAGGAAAAATCACCCAATCAGCTGCATACTGCT
GGAGGAAAACTCAAAAGGCATTTATCCTGCCATTACGGTACATCCCTCTGCTGCAAGGAG
AACCTAATCATTATCCATCTTGAGAATGATGTTGCAACTGGGCATGTATCCAACATTGGA
CAGCCTGAGTTGCTAGATGCATCAGCATCTTGATTGCACTACTACAGCTGTCCTCAAGCT
GGGATATGAAGCTGAATGCCCGCACTTCCATAACATTTTGACTGACACTTTGAAAACTCT
GTCAAGCTCCTCAATCCAT
■■Homology search results ■■ -
sp_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912662|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D12.
(559 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done

***** No hits found ******


tr_hit_id Q1RLS8
Definition tr|Q1RLS8|Q1RLS8_DANRE Zgc:136874 OS=Danio rerio
Align length 80
Score (bit) 37.0
E-value 0.73
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912662|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_D12.
(559 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1RLS8|Q1RLS8_DANRE Zgc:136874 OS=Danio rerio GN=zgc:136874 P... 37 0.73
tr|B6CZ30|B6CZ30_9ORTH NADH dehydrogenase subunit 4 OS=Tetrix ja... 35 2.8
tr|Q0R4Y0|Q0R4Y0_9MARC Maturase-like protein OS=Pellia epiphylla... 33 8.1

>tr|Q1RLS8|Q1RLS8_DANRE Zgc:136874 OS=Danio rerio GN=zgc:136874 PE=2
SV=1
Length = 428

Score = 37.0 bits (84), Expect = 0.73
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Frame = +1

Query: 187 KTDSIIKAHMSTVSTILDQSEEATPNLQEKSPNQLHTAGGK--LKRHLSCH-----YGTS 345
K D + S V + +++ATP+++ K P HT K LKRHL CH Y
Sbjct: 245 KADELYANLPSIVGVVGMFNKDATPSMRYKCPFCTHTVKRKADLKRHLRCHTGERPYPCQ 304

Query: 346 LCCKENLIIIHLENDVATGH 405
C K + HL + T H
Sbjct: 305 ACSKRFTRLEHLRSHFETIH 324


>tr|B6CZ30|B6CZ30_9ORTH NADH dehydrogenase subunit 4 OS=Tetrix
japonica PE=4 SV=1
Length = 441

Score = 35.0 bits (79), Expect = 2.8
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = -2

Query: 276 FFLKIWSCFFGLIKYS*HCAHVCFY---YGIGLYFFIEFHIALL 154
FFL +SC + L YS H CFY Y + + IEFH+ L
Sbjct: 383 FFLSFFSCVYSLYLYS-FSQHGCFYSGLYSVSSCYLIEFHLIFL 425


>tr|Q0R4Y0|Q0R4Y0_9MARC Maturase-like protein OS=Pellia epiphylla
GN=atp1 PE=4 SV=1
Length = 1291

Score = 33.5 bits (75), Expect = 8.1
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 6/57 (10%)
Frame = +1

Query: 139 YFQIL*KSYMKFYEKIKTDSIIKAHMSTVSTILDQSEEATPNLQE------KSPNQL 291
YF+++ K+Y K+Y K+ + +AH + +S+ L +S TP Q ++PNQ+
Sbjct: 939 YFKMVSKAYTKYYRKVPEGHLRQAHQTMLSSKLLRSGGFTPARQRTIDALGETPNQI 995