BP912667 |
Clone id |
YMU001_000021_E06 |
Library |
YMU01 |
Length |
654 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_E06. |
Accession |
BP912667 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CTGCTGTCCAGCGATCCATTTTCAATGAGCTCGCGTGCGCACAGCCTGGCAAGCTCATCA ATGCGAGATGATCTGAGTGTGGCGAGCTTCTCGGGTACCCCAAGCTACATGGCAAGCACA GAATCGGCGAGGGCGAAGCTACGATCCCACAGCACGCCAAAGCAACGAGCAGGGGGCGTT CGAAGCGCAGTTACAAGTGTGCATTCGGAAGAGATGGGCGCCCATCAGCTACAGCCTGCA TCCAGGAAACGCCTCTCCTTCGCCAACGTCGACAGCGGCTCCGCCCGCAACTTCCTCTCC TGGCGAGGCTCTGCCTCGCTGCAGCGCAACCATAGCTTTGAGGGCTATAGCTCTAAACAC AAATTTTGAAACTCTCTTGTCCCCCCACCTTATTTTACAACATCTCCATTTGCTTGCACA TTTGGACTCTCTCCACACCTACATATGCAGGCCTCACAAGCTAAAGGTGCTCAGTTGTTG CGGTGCATCTCCACTCGCTTCACGACATACCCAAGTTCAAAACATGTTTGGTACTTCTTA CCACCCAGAGCTTCACATTGTATCTCATCCTCAGTCCATCTCATACAGACAAATTCTCTG AAGCTTCCTTTGCAAGCTTGGCTCCCAATATCTATTCACTCCCTCCATTGAACG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8LPG9 |
Definition |
sp|Q8LPG9|IQD14_ARATH Protein IQ-DOMAIN 14 OS=Arabidopsis thaliana |
Align length |
37 |
Score (bit) |
39.3 |
E-value |
0.018 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NV67 |
Definition |
tr|A9NV67|A9NV67_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
99 |
Score (bit) |
55.5 |
E-value |
3.0e-06 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912667|Adiantum capillus-veneris mRNA, clone: YMU001_000021_E06. (654 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NV67|A9NV67_PICSI Putative uncharacterized protein OS=Picea... 55 3e-06 tr|A9TQC9|A9TQC9_PHYPA Predicted protein (Fragment) OS=Physcomit... 54 1e-05 tr|A9TSG9|A9TSG9_PHYPA Predicted protein (Fragment) OS=Physcomit... 49 2e-04 tr|A9TYE9|A9TYE9_PHYPA Predicted protein (Fragment) OS=Physcomit... 49 3e-04 tr|A9SAC4|A9SAC4_PHYPA Predicted protein (Fragment) OS=Physcomit... 47 8e-04 tr|A5ATG1|A5ATG1_VITVI Putative uncharacterized protein OS=Vitis... 47 0.001 tr|Q9LK76|Q9LK76_ARATH Genomic DNA, chromosome 3, P1 clone: MDC8... 44 0.011 tr|O04307|O04307_ARATH T02O04.1 protein (Fragment) OS=Arabidopsi... 44 0.011 tr|Q75J30|Q75J30_ORYSJ Os03g0636700 protein OS=Oryza sativa subs... 43 0.015 tr|A2XJW9|A2XJW9_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.015 tr|A7QKI1|A7QKI1_VITVI Chromosome chr2 scaffold_112, whole genom... 43 0.019 tr|A5AR08|A5AR08_VITVI Putative uncharacterized protein OS=Vitis... 43 0.019 tr|A7P723|A7P723_VITVI Chromosome chr9 scaffold_7, whole genome ... 42 0.033 tr|A5BBL6|A5BBL6_VITVI Putative uncharacterized protein OS=Vitis... 42 0.033 tr|Q9MAM4|Q9MAM4_ARATH T25K16.10 OS=Arabidopsis thaliana PE=4 SV=1 42 0.043 tr|Q8LEL3|Q8LEL3_ARATH Putative uncharacterized protein OS=Arabi... 42 0.043 tr|B3H705|B3H705_ARATH Uncharacterized protein At1g01110.1 OS=Ar... 42 0.043 tr|A7PVS2|A7PVS2_VITVI Chromosome chr8 scaffold_34, whole genome... 42 0.043 tr|A7R6B3|A7R6B3_VITVI Chromosome undetermined scaffold_1216, wh... 41 0.056 tr|A5AI31|A5AI31_VITVI Putative uncharacterized protein OS=Vitis... 41 0.056 tr|B6SSD5|B6SSD5_MAIZE IQ calmodulin-binding motif family protei... 41 0.074 tr|A7PEG2|A7PEG2_VITVI Chromosome chr11 scaffold_13, whole genom... 41 0.074 tr|Q8RXR4|Q8RXR4_ARATH Putative uncharacterized protein At4g1475... 40 0.13 tr|Q10L99|Q10L99_ORYSJ Os03g0355700 protein OS=Oryza sativa subs... 40 0.13 tr|O23331|O23331_ARATH Putative uncharacterized protein dl3415w ... 40 0.13 tr|A2XGS5|A2XGS5_ORYSI Putative uncharacterized protein OS=Oryza... 40 0.13 tr|Q9LYP2|Q9LYP2_ARATH Putative uncharacterized protein T28J14_1... 40 0.16 tr|Q8RWT3|Q8RWT3_ARATH Putative uncharacterized protein At5g0724... 40 0.16 tr|B6SW62|B6SW62_MAIZE Calmodulin binding protein OS=Zea mays PE... 40 0.16 tr|Q7FAG5|Q7FAG5_ORYSJ Os04g0569900 protein OS=Oryza sativa subs... 39 0.21
>tr|A9NV67|A9NV67_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 499
Score = 55.5 bits (132), Expect = 3e-06 Identities = 40/99 (40%), Positives = 51/99 (51%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQRAGGVRSAVTSVHSEEMGAHQLQPASR 246 DD S+ S P+YMASTESA+AK+RS STPKQR G + TS R Sbjct: 386 DDESLMSSPRIPNYMASTESAKAKVRSQSTPKQRPGTPDTEPTSYR-------------R 432
Query: 247 KRLSFANVDSGSARNFLSWRGSASLQRNHSFEGYSSKHK 363 KRLSF + S+ + S +GS + S +G S K Sbjct: 433 KRLSFP-LSEASSGPYRSTKGSMFPHTSPSLKGISGTSK 470
>tr|A9TQC9|A9TQC9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148970 PE=4 SV=1 Length = 391
Score = 53.5 bits (127), Expect = 1e-05 Identities = 24/36 (66%), Positives = 30/36 (83%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQRAG 174 DD S+ASF P+YM +T+SA+AK+RSHSTPKQR G Sbjct: 276 DDESLASFPSVPNYMQATQSAKAKVRSHSTPKQRPG 311
>tr|A9TSG9|A9TSG9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_31884 PE=4 SV=1 Length = 360
Score = 49.3 bits (116), Expect = 2e-04 Identities = 23/36 (63%), Positives = 28/36 (77%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQRAG 174 DD S+AS P+YM +T+SARAK+RSHS PKQR G Sbjct: 304 DDESLASCPSVPNYMQATQSARAKVRSHSQPKQRPG 339
>tr|A9TYE9|A9TYE9_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_152658 PE=4 SV=1 Length = 403
Score = 48.9 bits (115), Expect = 3e-04 Identities = 22/34 (64%), Positives = 28/34 (82%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQR 168 DD S+AS P+YM +T+SA+AK+RSHSTPKQR Sbjct: 288 DDKSLASSPSVPNYMQATQSAKAKVRSHSTPKQR 321
>tr|A9SAC4|A9SAC4_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_42864 PE=4 SV=1 Length = 338
Score = 47.4 bits (111), Expect = 8e-04 Identities = 22/34 (64%), Positives = 27/34 (79%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQR 168 DD S+AS P+YM +T+SARAK+RSHS PKQR Sbjct: 282 DDESLASSPSVPNYMQATQSARAKVRSHSQPKQR 315
>tr|A5ATG1|A5ATG1_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016441 PE=4 SV=1 Length = 1497
Score = 46.6 bits (109), Expect = 0.001 Identities = 32/90 (35%), Positives = 48/90 (53%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQRAGGVRSAVTSVHSEEMGAHQLQPASR 246 DD S S P+YMA+TESA+AK R+ STPKQR G + S ++ + +P+ Sbjct: 646 DDSSFPSSPVFPTYMAATESAKAKARALSTPKQRLGFLDSCF-----DQSSPYTNRPSFW 700
Query: 247 KRLSFANVDSGSARNFLSWRGSASLQRNHS 336 L+ ++ S S R+ SW+ + N S Sbjct: 701 SSLNGESI-SSSGRSGYSWQNTHEQPNNPS 729
Score = 38.5 bits (88), Expect = 0.37 Identities = 30/82 (36%), Positives = 42/82 (51%) Frame = +1
Query: 67 DDLSVASFSGTPSYMASTESARAKLRSHSTPKQRAGGVRSAVTSVHSEEMGAHQLQPASR 246 D+ S S P+YMA+TESA+AK RS S KQR G + S HS A + Sbjct: 1416 DNRSFPSSPVFPTYMATTESAKAKARSMSMXKQRVGFLDSCFD--HSS---------AYK 1464
Query: 247 KRLSFANVDSGSARNFLSWRGS 312 RLSF + +G + + + G+ Sbjct: 1465 NRLSFWSSFNGESISNIGKNGT 1486
>tr|Q9LK76|Q9LK76_ARATH Genomic DNA, chromosome 3, P1 clone: MDC8 (At3g16490) OS=Arabidopsis thaliana GN=At3g16490 PE=2 SV=1 Length = 389
Score = 43.5 bits (101), Expect = 0.011 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = +1
Query: 97 TPSYMASTESARAKLRSHSTPKQRAGGVR---SAVTSVHSEEMGAHQLQP 237 TPSYMA+T+S +AK+RSHS P+QR R + + S G +QP Sbjct: 307 TPSYMANTQSFKAKVRSHSAPRQRPDRKRLSLDEIMAARSSVSGVRMVQP 356
>tr|O04307|O04307_ARATH T02O04.1 protein (Fragment) OS=Arabidopsis thaliana GN=T02O04.1 PE=4 SV=1 Length = 207
Score = 43.5 bits (101), Expect = 0.011 Identities = 22/50 (44%), Positives = 30/50 (60%), Gaps = 3/50 (6%) Frame = +1
Query: 97 TPSYMASTESARAKLRSHSTPKQRAGGVR---SAVTSVHSEEMGAHQLQP 237 TPSYMA+T+S +AK+RSHS P+QR R + + S G +QP Sbjct: 125 TPSYMANTQSFKAKVRSHSAPRQRPDRKRLSLDEIMAARSSVSGVRMVQP 174
>tr|Q75J30|Q75J30_ORYSJ Os03g0636700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0066H15.20 PE=4 SV=1 Length = 447
Score = 43.1 bits (100), Expect = 0.015 Identities = 26/62 (41%), Positives = 36/62 (58%) Frame = +1
Query: 100 PSYMASTESARAKLRSHSTPKQRAGGVRSAVTSVHSEEMGAHQLQPASRKRLSFANVDSG 279 P+YMA+TES+RAK RS S P+QRA +V+S SE + AS +R + + Sbjct: 324 PNYMANTESSRAKARSQSAPRQRA-----SVSSSASEASSVRWERQASARRRASLEAQAA 378
Query: 280 SA 285 SA Sbjct: 379 SA 380
>tr|A2XJW9|A2XJW9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_12737 PE=4 SV=1 Length = 447
Score = 43.1 bits (100), Expect = 0.015 Identities = 26/62 (41%), Positives = 36/62 (58%) Frame = +1
Query: 100 PSYMASTESARAKLRSHSTPKQRAGGVRSAVTSVHSEEMGAHQLQPASRKRLSFANVDSG 279 P+YMA+TES+RAK RS S P+QRA +V+S SE + AS +R + + Sbjct: 324 PNYMANTESSRAKARSQSAPRQRA-----SVSSSASEASSVRWERQASARRRASLEAQAA 378
Query: 280 SA 285 SA Sbjct: 379 SA 380
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