BP912668 |
Clone id |
YMU001_000021_E07 |
Library |
YMU01 |
Length |
572 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_E07. |
Accession |
BP912668 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3975Contig1 |
Sequence |
ACCCCAAGCTCCCTTCGGCTCTGCCTCAAGACACCGATTACCCATCCCCATCTCCAACAC TTGACAGAAATCTCGATTGCCACCTGCATTCGCTATAGCTGCTATGTCCAACTTCACAGC CCGTCAACACCCTCGCTTCGCCTGCTTTTGGAGGTAGGCCCGGGGACTTCAACATCGTGC CTACGGCCAGCTGGTCTCAGCTTTCCTTCGGTACTCCCTGCCTTGCTGTCACGCTCTTAA AGCCCATCAATGCCGGAAGAGCGGCAGTGGACCTAGACTCCAAAGGGATTGAAAGCTCCC GCTTCACGCTACTCTGTCCTCCAAACCCCTGCGCGGTGCTCATCAACGCACGAGAGGGGG GCACAATCATTACAAAGAAAGCTCGATGCAGCTGATCCTCACTTGCATGTTGCGCCAATG AGCCCCAATTATAGCTACCCGTTTCTGTAATCTGCATAGCCTTTGGCTGTCTCCTGTTTG AAGCTCTGCTCGGCTCAATCTACTATCCTCATTTGCTACAGTTGCTTGCTATTCTTACTC CACAATGACCACTGCACTCGCTTGTATGCATC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
A1JK23 |
Definition |
sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) |
Align length |
86 |
Score (bit) |
32.0 |
E-value |
2.2 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912668|Adiantum capillus-veneris mRNA, clone: YMU001_000021_E07. (572 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enteroc... 32 2.2 sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus lum... 32 2.2 sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 31 3.8 sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8 sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8 sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8 sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8 sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 31 3.8 sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor... 31 5.0 sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN... 30 6.5
>sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.2 Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + ++ L P ++TA +PA+ K V AR GV E DQL G +++ P Sbjct: 12 GDRIAIVSGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGVAPELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus luminescens subsp. laumondii GN=fadI PE=3 SV=1 Length = 436
Score = 32.0 bits (71), Expect = 2.2 Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%) Frame = -2
Query: 355 SRALMSTAQGFGGQSSVKRELSIPLESRSTAA--LPALMGFKSVTA----RQGVPKES*D 194 SR L Q G + ++ L IP ++T+ +PA+ KSV + R G+ E D Sbjct: 2 SRPLTKVTQQ-GDRIAIVSGLRIPFAKQATSYHDIPAVDLGKSVVSELVTRSGLLPEKID 60
Query: 193 QLAVGTMLKSPGLPPKAGEARVLTGCEVGHSSYSECR 83 QL G +++ P P A E + G V +YS R Sbjct: 61 QLVFGQVVQMPEAPNIAREIVLGAGLSVSTDAYSVSR 97
>sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis (strain Pestoides F) GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv. Antiqua (strain Antiqua) GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudotuberculosis serotype O:1b (strain IP 31758) GN=fadI PE=3 SV=1 Length = 436
Score = 31.2 bits (69), Expect = 3.8 Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%) Frame = -2
Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161 G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71
Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83 P A E + TG V +YS R Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97
>sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor (Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1 Length = 778
Score = 30.8 bits (68), Expect = 5.0 Identities = 22/49 (44%), Positives = 25/49 (51%) Frame = +2
Query: 206 LRYSLPCCHALKAHQCRKSGSGPRLQRD*KLPLHATLSSKPLRGAHQRT 352 LR LP CHAL AH CR S R+ PL + S L GAH+ T Sbjct: 4 LRLPLPLCHALAAH-CRCPASHTLRCRE---PLTVSSLSALLLGAHRPT 48
>sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN=ZNF831 PE=2 SV=4 Length = 1677
Score = 30.4 bits (67), Expect = 6.5 Identities = 24/98 (24%), Positives = 40/98 (40%) Frame = -1
Query: 359 PLSCVDEHRAGVWRTE*REAGAFNPFGV*VHCRSSGIDGL*ERDSKAGSTEGKLRPAGRR 180 P S H+ G +T G + + V C S G DG + S + + + P+ Sbjct: 1574 PSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGSDGRKRQVSGLITRKDSVVPSKPE 1633
Query: 179 HDVEVPGPTSKSRRSEGVDGL*SWT*QL*RMQVAIEIS 66 +E+P SKS + ++G+ R Q +E S Sbjct: 1634 QPIEIPEAPSKSLKKRSLEGM--------RKQTRVEFS 1663
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q2U2J3 |
Definition |
tr|Q2U2J3|Q2U2J3_ASPOR Predicted protein OS=Aspergillus oryzae |
Align length |
121 |
Score (bit) |
38.1 |
E-value |
0.35 |
Report |
|