BP912668
Clone id YMU001_000021_E07
Library
Length 572
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_E07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACCCCAAGCTCCCTTCGGCTCTGCCTCAAGACACCGATTACCCATCCCCATCTCCAACAC
TTGACAGAAATCTCGATTGCCACCTGCATTCGCTATAGCTGCTATGTCCAACTTCACAGC
CCGTCAACACCCTCGCTTCGCCTGCTTTTGGAGGTAGGCCCGGGGACTTCAACATCGTGC
CTACGGCCAGCTGGTCTCAGCTTTCCTTCGGTACTCCCTGCCTTGCTGTCACGCTCTTAA
AGCCCATCAATGCCGGAAGAGCGGCAGTGGACCTAGACTCCAAAGGGATTGAAAGCTCCC
GCTTCACGCTACTCTGTCCTCCAAACCCCTGCGCGGTGCTCATCAACGCACGAGAGGGGG
GCACAATCATTACAAAGAAAGCTCGATGCAGCTGATCCTCACTTGCATGTTGCGCCAATG
AGCCCCAATTATAGCTACCCGTTTCTGTAATCTGCATAGCCTTTGGCTGTCTCCTGTTTG
AAGCTCTGCTCGGCTCAATCTACTATCCTCATTTGCTACAGTTGCTTGCTATTCTTACTC
CACAATGACCACTGCACTCGCTTGTATGCATC
■■Homology search results ■■ -
sp_hit_id A1JK23
Definition sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081)
Align length 86
Score (bit) 32.0
E-value 2.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912668|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_E07.
(572 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia enteroc... 32 2.2
sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus lum... 32 2.2
sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 31 3.8
sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8
sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8
sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8
sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis ... 31 3.8
sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia pseudot... 31 3.8
sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor... 31 5.0
sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens GN... 30 6.5

>sp|A1JK23|FADI_YERE8 3-ketoacyl-CoA thiolase OS=Yersinia
enterocolitica serotype O:8 / biotype 1B (strain 8081)
GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.2
Identities = 28/86 (32%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + ++ L P ++TA +PA+ K V AR GV E DQL G +++ P
Sbjct: 12 GDRIAIVSGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGVAPELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q7N287|FADI_PHOLL 3-ketoacyl-CoA thiolase OS=Photorhabdus
luminescens subsp. laumondii GN=fadI PE=3 SV=1
Length = 436

Score = 32.0 bits (71), Expect = 2.2
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 6/97 (6%)
Frame = -2

Query: 355 SRALMSTAQGFGGQSSVKRELSIPLESRSTAA--LPALMGFKSVTA----RQGVPKES*D 194
SR L Q G + ++ L IP ++T+ +PA+ KSV + R G+ E D
Sbjct: 2 SRPLTKVTQQ-GDRIAIVSGLRIPFAKQATSYHDIPAVDLGKSVVSELVTRSGLLPEKID 60

Query: 193 QLAVGTMLKSPGLPPKAGEARVLTGCEVGHSSYSECR 83
QL G +++ P P A E + G V +YS R
Sbjct: 61 QLVFGQVVQMPEAPNIAREIVLGAGLSVSTDAYSVSR 97


>sp|Q668V0|FADI_YERPS 3-ketoacyl-CoA thiolase OS=Yersinia
pseudotuberculosis GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|A4TM83|FADI_YERPP 3-ketoacyl-CoA thiolase OS=Yersinia pestis
(strain Pestoides F) GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q1CHK1|FADI_YERPN 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv.
Antiqua (strain Nepal516) GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q8ZD46|FADI_YERPE 3-ketoacyl-CoA thiolase OS=Yersinia pestis
GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q1C659|FADI_YERPA 3-ketoacyl-CoA thiolase OS=Yersinia pestis bv.
Antiqua (strain Antiqua) GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|A7FGK0|FADI_YERP3 3-ketoacyl-CoA thiolase OS=Yersinia
pseudotuberculosis serotype O:1b (strain IP 31758)
GN=fadI PE=3 SV=1
Length = 436

Score = 31.2 bits (69), Expect = 3.8
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Frame = -2

Query: 322 GGQSSVKRELSIPLESRSTA--ALPALMGFKSVT----ARQGVPKES*DQLAVGTMLKSP 161
G + + L P ++TA +PA+ K V AR G+ E DQL G +++ P
Sbjct: 12 GDRIVIVNGLRTPFAKQATAYHGVPAVDLGKIVVSELLARSGISSELIDQLVFGQVVQMP 71

Query: 160 GLPPKAGEARVLTGCEVGHSSYSECR 83
P A E + TG V +YS R
Sbjct: 72 EAPNIAREIVLGTGMSVHTDAYSVSR 97


>sp|Q91009|NTRK1_CHICK High affinity nerve growth factor receptor
(Fragment) OS=Gallus gallus GN=NTRK1 PE=2 SV=1
Length = 778

Score = 30.8 bits (68), Expect = 5.0
Identities = 22/49 (44%), Positives = 25/49 (51%)
Frame = +2

Query: 206 LRYSLPCCHALKAHQCRKSGSGPRLQRD*KLPLHATLSSKPLRGAHQRT 352
LR LP CHAL AH CR S R+ PL + S L GAH+ T
Sbjct: 4 LRLPLPLCHALAAH-CRCPASHTLRCRE---PLTVSSLSALLLGAHRPT 48


>sp|Q5JPB2|ZN831_HUMAN Zinc finger protein 831 OS=Homo sapiens
GN=ZNF831 PE=2 SV=4
Length = 1677

Score = 30.4 bits (67), Expect = 6.5
Identities = 24/98 (24%), Positives = 40/98 (40%)
Frame = -1

Query: 359 PLSCVDEHRAGVWRTE*REAGAFNPFGV*VHCRSSGIDGL*ERDSKAGSTEGKLRPAGRR 180
P S H+ G +T G + + V C S G DG + S + + + P+
Sbjct: 1574 PSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGSDGRKRQVSGLITRKDSVVPSKPE 1633

Query: 179 HDVEVPGPTSKSRRSEGVDGL*SWT*QL*RMQVAIEIS 66
+E+P SKS + ++G+ R Q +E S
Sbjct: 1634 QPIEIPEAPSKSLKKRSLEGM--------RKQTRVEFS 1663


tr_hit_id Q2U2J3
Definition tr|Q2U2J3|Q2U2J3_ASPOR Predicted protein OS=Aspergillus oryzae
Align length 121
Score (bit) 38.1
E-value 0.35
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912668|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_E07.
(572 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q2U2J3|Q2U2J3_ASPOR Predicted protein OS=Aspergillus oryzae G... 38 0.35
tr|B8NIU7|B8NIU7_ASPFL PITSLRE serine/threonine-protein kinase C... 38 0.35
tr|B6H810|B6H810_PENCH Pc16g07520 protein OS=Penicillium chrysog... 35 3.0
tr|Q55PJ2|Q55PJ2_CRYNE Putative uncharacterized protein OS=Crypt... 34 5.0
tr|Q7NHA8|Q7NHA8_GLOVI ATP-dependent DNA helicase OS=Gloeobacter... 34 6.6
tr|Q54GM7|Q54GM7_DICDI EGF-like domain-containing protein OS=Dic... 33 8.6
tr|B4LBY0|B4LBY0_DROVI GJ13442 OS=Drosophila virilis GN=GJ13442 ... 33 8.6

>tr|Q2U2J3|Q2U2J3_ASPOR Predicted protein OS=Aspergillus oryzae
GN=AO090038000433 PE=4 SV=1
Length = 442

Score = 38.1 bits (87), Expect = 0.35
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = -2

Query: 487 RASNRRQPKAMQITETGSYNWGSLAQHA-SEDQLHRAFFVMIVPPSRALMSTAQGFGGQS 311
R RRQ + I E SY+ S +H+ +D+ R F++ P RA S G G+
Sbjct: 233 RRERRRQEREAGIYENPSYDPRSRKRHSYMDDRAARDFYMQGGDPDRAYRSRRHGDDGEH 292

Query: 310 SVKRELSIPLESRSTAALPALMGFKS---VTARQGVPKES*DQLAVGTMLKSPGLPPKAG 140
+ +R P E+R +P K+ V ++ P E V TML +PP G
Sbjct: 293 ARRRRSRAPEETRPLPMMPGQRKDKTSSWVNSQASDPPE--PPPVVPTML---DMPPAPG 347

Query: 139 E 137
E
Sbjct: 348 E 348


>tr|B8NIU7|B8NIU7_ASPFL PITSLRE serine/threonine-protein kinase
CDC2L1, putative OS=Aspergillus flavus NRRL3357
GN=AFLA_069750 PE=4 SV=1
Length = 396

Score = 38.1 bits (87), Expect = 0.35
Identities = 36/121 (29%), Positives = 53/121 (43%), Gaps = 4/121 (3%)
Frame = -2

Query: 487 RASNRRQPKAMQITETGSYNWGSLAQHA-SEDQLHRAFFVMIVPPSRALMSTAQGFGGQS 311
R RRQ + I E SY+ S +H+ +D+ R F++ P RA S G G+
Sbjct: 187 RRERRRQEREAGIYENPSYDPRSRKRHSYMDDRAARDFYMQGGDPDRAYRSRRHGDDGEH 246

Query: 310 SVKRELSIPLESRSTAALPALMGFKS---VTARQGVPKES*DQLAVGTMLKSPGLPPKAG 140
+ +R P E+R +P K+ V ++ P E V TML +PP G
Sbjct: 247 ARRRRSRAPEETRPLPMMPGQRKDKTSSWVNSQASDPPE--PPPVVPTML---DMPPAPG 301

Query: 139 E 137
E
Sbjct: 302 E 302


>tr|B6H810|B6H810_PENCH Pc16g07520 protein OS=Penicillium
chrysogenum Wisconsin 54-1255 GN=Pc16g07520 PE=4 SV=1
Length = 784

Score = 35.0 bits (79), Expect = 3.0
Identities = 26/97 (26%), Positives = 47/97 (48%)
Frame = -2

Query: 490 SRASNRRQPKAMQITETGSYNWGSLAQHASEDQLHRAFFVMIVPPSRALMSTAQGFGGQS 311
++A +RR+ ++ T G ++ GS +S+D+L R++ + S + FGG
Sbjct: 651 TQARSRRRTSSVSFTNGGIFDIGS----SSDDELERSYTLRPKLAGHRASSDSSSFGGAH 706

Query: 310 SVKRELSIPLESRSTAALPALMGFKSVTARQGVPKES 200
S P+ SR ++ SVTAR+ PK++
Sbjct: 707 RSHGPHS-PIRSRRSSFSSGAAYTPSVTARRSSPKQA 742


>tr|Q55PJ2|Q55PJ2_CRYNE Putative uncharacterized protein
OS=Cryptococcus neoformans GN=CNBG2200 PE=4 SV=1
Length = 698

Score = 34.3 bits (77), Expect = 5.0
Identities = 33/126 (26%), Positives = 45/126 (35%), Gaps = 4/126 (3%)
Frame = +3

Query: 3 PKLPSALPQDTDYPSPSPTLDRNXXXXXXXXXXXXPTSQPVNTLASPAFGGRPGDFNIVP 182
P + LP P+P+P D P +NTLA+PA RP I
Sbjct: 8 PTIAEPLPDTLLPPNPAPHPDETLA----------PEKPSINTLATPAPLPRPSTLTIPN 57

Query: 183 TASWSQLSFGTPCLAVTLLKPINAGRAAVDLDS---KGIESSRF-TLLCPPNPCAVLINA 350
+ + + G P +AGR D +S KGI+ S F P P
Sbjct: 58 APAQNPPAKGVPACTPAANATPSAGRRDGDAESGGVKGIDLSEFDPYATTPGPSIAANGK 117

Query: 351 REGGTI 368
GT+
Sbjct: 118 ERDGTV 123


>tr|Q7NHA8|Q7NHA8_GLOVI ATP-dependent DNA helicase OS=Gloeobacter
violaceus GN=recQ PE=4 SV=1
Length = 746

Score = 33.9 bits (76), Expect = 6.6
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +1

Query: 253 PEERQWT*TPKGLKAPASRYSVLQTPARCSSTHERGAQSLQRKLDAADPHLHVAPMS-PN 429
PE RQ L A R++ L T A ++ ER Q + +L DPH+H+A PN
Sbjct: 169 PEYRQ-------LAAVRERFAALPTLALTATATERVRQDILVQLKLRDPHIHIASFDRPN 221

Query: 430 YSYPFL 447
Y L
Sbjct: 222 LHYAVL 227


>tr|Q54GM7|Q54GM7_DICDI EGF-like domain-containing protein
OS=Dictyostelium discoideum GN=DDB_0231822 PE=4 SV=1
Length = 1399

Score = 33.5 bits (75), Expect = 8.6
Identities = 25/98 (25%), Positives = 36/98 (36%), Gaps = 3/98 (3%)
Frame = +3

Query: 24 PQDTDYPSPSPTLDRNXXXXXXXXXXXXPTSQPVNTLASPAFGGRPGDFNIVPTASWSQL 203
P T+ PSP+PT PT+ P L +P GG+ F
Sbjct: 1025 PTPTESPSPTPTTTTTPTTTPIPTTTPIPTNPPQKCLGNPECGGKTQGFCSPTGCICYSP 1084

Query: 204 SFGTPCLAVTLLKP---INAGRAAVDLDSKGIESSRFT 308
GT C + ++ P IN V++ + I S T
Sbjct: 1085 WIGTTCTSQIIIVPQPSINTTNPNVEIPTDNIGQSSET 1122


>tr|B4LBY0|B4LBY0_DROVI GJ13442 OS=Drosophila virilis GN=GJ13442 PE=4
SV=1
Length = 3612

Score = 33.5 bits (75), Expect = 8.6
Identities = 19/43 (44%), Positives = 21/43 (48%), Gaps = 6/43 (13%)
Frame = +2

Query: 170 QHRAYGQLVS------AFLRYSLPCCHALKAHQCRKSGSGPRL 280
Q R YG+ S A RYSLP CH+L H R PRL
Sbjct: 3440 QRRGYGRTRSPMAPRFAHKRYSLPSCHSLDIHLDRLHAQAPRL 3482