BP912681
Clone id YMU001_000021_F08
Library
Length 434
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_F08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTTTTGGTGGCATATTAGTAAACCAAACATGGCTAGGATATACAGC
AACTGGCACCTTTGGACGAGTGACACATGACATAGCATAAATGCAACGGAGGTGACAAGT
AAAAGTTTTCCATAAATTGAATTCCACGGATGTACAAGCAGCAGTTAAATGCCACTCATT
TCAAAAAGCCGCTCACTGAATCTGTTGAATGATCTGCTTCTCTCTACACGGCCCAGTTGA
ACAATAAATAACATCTGGCCCAACCATCCCCACTTCTGTGCTTCACACAAGCTTTACCCG
TTGAAACAAAATATGGCACACCCCCGTTCCATAATTTCTATCATAGGCTTATCACATTAT
GAAATTCCTGAGGTAATCAGGATCCCTCTTTGTTGAGTCTTGAAACTTCTTGAACCATCT
GTCCAATATATCCA
■■Homology search results ■■ -
sp_hit_id Q01804
Definition sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sapiens
Align length 26
Score (bit) 32.7
E-value 0.58
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912681|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_F08.
(415 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo sa... 33 0.58
sp|A4INR2|ARSC_GEOTN Protein arsC OS=Geobacillus thermodenitrifi... 30 3.8
sp|Q9QUK4|BIR1B_MOUSE Baculoviral IAP repeat-containing protein ... 29 6.4
sp|P45947|ARSC_BACSU Protein arsC OS=Bacillus subtilis GN=arsC P... 29 8.4

>sp|Q01804|OTUD4_HUMAN OTU domain-containing protein 4 OS=Homo
sapiens GN=OTUD4 PE=1 SV=2
Length = 1114

Score = 32.7 bits (73), Expect = 0.58
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -3

Query: 80 YAMSCVTRPKVPVAVYPSHVWFTNMP 3
Y +C PKVPV VYP + WF P
Sbjct: 728 YLAACRMYPKVPVPVYPHNPWFQEAP 753


>sp|A4INR2|ARSC_GEOTN Protein arsC OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=arsC PE=3 SV=1
Length = 140

Score = 30.0 bits (66), Expect = 3.8
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = -2

Query: 309 NGGVPYFVSTGKACVKHRSGDGWARCYLLFNWAV 208
N + YF+ TG +C + + +GWA+ YL +W V
Sbjct: 3 NKKIIYFLCTGNSC-RSQMAEGWAKKYLGDDWEV 35


>sp|Q9QUK4|BIR1B_MOUSE Baculoviral IAP repeat-containing protein 1b
OS=Mus musculus GN=Naip2 PE=2 SV=1
Length = 1447

Score = 29.3 bits (64), Expect = 6.4
Identities = 22/59 (37%), Positives = 27/59 (45%), Gaps = 9/59 (15%)
Frame = -2

Query: 168 FLK*VAF----NCCLYIRGIQFMENFYLS-----PPLHLCYVMCHSSKGASCCIS*PCL 19
FLK +AF CC + Q + FYLS P L ++C GA CIS CL
Sbjct: 523 FLKRIAFLWASGCCPLLNRFQLV--FYLSLSSITPGQELAKIICAQLLGAGGCISEVCL 579


>sp|P45947|ARSC_BACSU Protein arsC OS=Bacillus subtilis GN=arsC PE=1
SV=1
Length = 139

Score = 28.9 bits (63), Expect = 8.4
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2

Query: 294 YFVSTGKACVKHRSGDGWARCYLLFNWAV 208
YF+ TG +C + + +GWA+ YL W V
Sbjct: 7 YFLCTGNSC-RSQMAEGWAKQYLGDEWKV 34


tr_hit_id A9NZ77
Definition tr|A9NZ77|A9NZ77_PICSI Putative uncharacterized protein OS=Picea sitchensis
Align length 26
Score (bit) 48.1
E-value 0.0002
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912681|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_F08.
(415 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A9NZ77|A9NZ77_PICSI Putative uncharacterized protein OS=Picea... 48 2e-04
tr|Q9C8D7|Q9C8D7_ARATH Putative uncharacterized protein F15E12.1... 47 4e-04
tr|A9PD89|A9PD89_POPTR Putative uncharacterized protein OS=Popul... 45 0.002
tr|A5C6P1|A5C6P1_VITVI Putative uncharacterized protein (Chromos... 45 0.002
tr|A9TJ75|A9TJ75_PHYPA Predicted protein OS=Physcomitrella paten... 44 0.003
tr|Q8H007|Q8H007_ORYSJ Putative uncharacterized protein OJ1081D0... 43 0.007
tr|Q10PE1|Q10PE1_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 43 0.007
tr|Q0DTM9|Q0DTM9_ORYSJ Os03g0237500 protein OS=Oryza sativa subs... 43 0.007
tr|A9S7R5|A9S7R5_PHYPA Predicted protein OS=Physcomitrella paten... 43 0.007
tr|B6TQX0|B6TQX0_MAIZE Putative uncharacterized protein OS=Zea m... 43 0.009
tr|Q80TL3|Q80TL3_MOUSE MKIAA1046 protein (Fragment) OS=Mus muscu... 34 4.2
tr|B7ZNI5|B7ZNI5_MOUSE OTU domain containing 4 OS=Mus musculus G... 34 4.2
tr|B2RRE7|B2RRE7_MOUSE Otud4 protein OS=Mus musculus GN=Otud4 PE... 34 4.2
tr|Q5XI11|Q5XI11_RAT Otud4 protein (Fragment) OS=Rattus norvegic... 33 5.4
tr|Q498M3|Q498M3_RAT Otud4 protein (Fragment) OS=Rattus norvegic... 33 5.4
tr|Q9GV73|Q9GV73_HALRO HNF-3 OS=Halocynthia roretzi PE=2 SV=1 33 5.4
tr|Q584C7|Q584C7_9TRYP Putative uncharacterized protein OS=Trypa... 33 9.2
tr|B4DYS4|B4DYS4_HUMAN cDNA FLJ56410, highly similar to Homo sap... 33 9.3
tr|A0PJA7|A0PJA7_HUMAN OTUD4 protein (Fragment) OS=Homo sapiens ... 33 9.3

>tr|A9NZ77|A9NZ77_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 187

Score = 48.1 bits (113), Expect = 2e-04
Identities = 18/26 (69%), Positives = 24/26 (92%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNFIM 336
DILDRWFKKFQ+ KRDP+YL++F++
Sbjct: 162 DILDRWFKKFQERAKRDPEYLKSFVI 187


>tr|Q9C8D7|Q9C8D7_ARATH Putative uncharacterized protein F15E12.12
(Putative uncharacterized protein At1g66080) (At1g66080)
OS=Arabidopsis thaliana GN=At1g66080 PE=2 SV=1
Length = 190

Score = 47.4 bits (111), Expect = 4e-04
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNFIM 336
DILDRWFKKFQ+ KRDPD+L++F +
Sbjct: 165 DILDRWFKKFQEKAKRDPDFLKSFAL 190


>tr|A9PD89|A9PD89_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 188

Score = 45.1 bits (105), Expect = 0.002
Identities = 17/24 (70%), Positives = 22/24 (91%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNF 342
DILDRWFKKF++ KRDPD+L++F
Sbjct: 163 DILDRWFKKFRERAKRDPDFLKSF 186


>tr|A5C6P1|A5C6P1_VITVI Putative uncharacterized protein (Chromosome
chr4 scaffold_39, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00026683001 PE=4 SV=1
Length = 190

Score = 45.1 bits (105), Expect = 0.002
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNFIM 336
DILDRWFKKF++ KRDP+YL+ F +
Sbjct: 165 DILDRWFKKFRERAKRDPEYLKGFAL 190


>tr|A9TJ75|A9TJ75_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_93459 PE=4 SV=1
Length = 189

Score = 44.3 bits (103), Expect = 0.003
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNFIM 336
DIL++WFKKFQ+ +RDPDYL F M
Sbjct: 164 DILNQWFKKFQEKARRDPDYLNRFTM 189


>tr|Q8H007|Q8H007_ORYSJ Putative uncharacterized protein OJ1081D05.9
OS=Oryza sativa subsp. japonica GN=OJ1081D05.9 PE=4 SV=1
Length = 180

Score = 43.1 bits (100), Expect = 0.007
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNF 342
DILDRWF+KFQ+ K+DP YL+ F
Sbjct: 155 DILDRWFRKFQERAKKDPSYLKTF 178


>tr|Q10PE1|Q10PE1_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=LOC_Os03g13450 PE=4 SV=1
Length = 215

Score = 43.1 bits (100), Expect = 0.007
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNF 342
DILDRWF+KFQ+ K+DP YL+ F
Sbjct: 190 DILDRWFRKFQERAKKDPSYLKTF 213


>tr|Q0DTM9|Q0DTM9_ORYSJ Os03g0237500 protein OS=Oryza sativa subsp.
japonica GN=Os03g0237500 PE=4 SV=1
Length = 150

Score = 43.1 bits (100), Expect = 0.007
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNF 342
DILDRWF+KFQ+ K+DP YL+ F
Sbjct: 125 DILDRWFRKFQERAKKDPSYLKTF 148


>tr|A9S7R5|A9S7R5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_163332 PE=4 SV=1
Length = 189

Score = 43.1 bits (100), Expect = 0.007
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNFIM 336
DIL++WFKKFQ+ +RDPDYL F +
Sbjct: 164 DILNQWFKKFQEKARRDPDYLNRFTL 189


>tr|B6TQX0|B6TQX0_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 180

Score = 42.7 bits (99), Expect = 0.009
Identities = 16/24 (66%), Positives = 21/24 (87%)
Frame = -3

Query: 413 DILDRWFKKFQDSTKRDPDYLRNF 342
DILDRWF+KFQ+ K+DP YL++F
Sbjct: 155 DILDRWFRKFQERAKKDPAYLKSF 178