BP912684
Clone id YMU001_000021_F11
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_F11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
ACTGCTGATTGCTTTAGAAGTAGCAAAGACGTGCTTGTGTTGGCGGTGCCGCAGCAAGCC
GTCAACAGAGAAAACCCTGTAATATATGTATGGGTAGGAAGGGAGCTGTATGACCAAGCT
GGAGATTTGGACTCACCATGGCAGCAAGTTGGACACCAATTCCTCAAACATTTGAAGTGC
CGGACAGGCACACAGATAAGGGTGGTAAAGCAGGGCGATGAACCAGATGAACTTTTGGTT
ATGTCTTTGCAATAATGCCCAAGATTTTGGGAGGTGGCGAGATGGAAGTCCAAGGCAGAA
AAGGGGCGCTATAGGCTCTCAGAGCTGAAGTGGGAACCTCCACTATATCTTATCTGGTGG
GCTGGCAGGGCTGTTGGAAGTAGAAAGTTTTGTAAGTTCAATTTGGGTAATACAGTCTTA
CCCAGGTCCCTTACATTTTTGAGTGTCAGCTTTGTACATTACAGGTATTGATTGGCTAGA
TTTAGCACATTTGACCATCCAAAGATGGGGTGTAAAAAGTGTT
■■Homology search results ■■ -
sp_hit_id Q60321
Definition sp|Q60321|Y013_METJA Uncharacterized protein MJ0013 OS=Methanocaldococcus jannaschii
Align length 38
Score (bit) 31.6
E-value 2.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912684|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_F11.
(523 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q60321|Y013_METJA Uncharacterized protein MJ0013 OS=Methanoca... 32 2.4
sp|Q0RHS2|NHAA2_FRAAA Na(+)/H(+) antiporter nhaA 2 OS=Frankia al... 31 3.1
sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog (... 31 3.1
sp|Q25479|NKCL_MANSE Bumetanide-sensitive sodium-(potassium)-chl... 31 4.1
sp|O74757|HRD1_SCHPO ERAD-associated E3 ubiquitin-protein ligase... 30 5.3
sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo s... 30 7.0
sp|A5UKY3|GLMM_METS3 Probable phosphoglucosamine mutase OS=Metha... 30 7.0
sp|Q9URU4|YBKF_SCHPO Putative cell agglutination protein C1289.1... 30 9.0

>sp|Q60321|Y013_METJA Uncharacterized protein MJ0013
OS=Methanocaldococcus jannaschii GN=MJ0013 PE=4 SV=1
Length = 162

Score = 31.6 bits (70), Expect = 2.4
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +1

Query: 223 PDELLVMSLQ*CPRFWEVARWKSKAEKGRYRLSELKWE 336
PDE + +S + WE WK K K RY++ + K++
Sbjct: 28 PDEFIKISQRAIDIIWENINWKEKVVKHRYKIGKKKYK 65


>sp|Q0RHS2|NHAA2_FRAAA Na(+)/H(+) antiporter nhaA 2 OS=Frankia alni
(strain ACN14a) GN=nhaA2 PE=3 SV=1
Length = 486

Score = 31.2 bits (69), Expect = 3.1
Identities = 23/80 (28%), Positives = 34/80 (42%)
Frame = +2

Query: 269 GRWRDGSPRQKRGAIGSQS*SGNLHYILSGGLAGLLEVESFVSSIWVIQSYPGPLHF*VS 448
GRW PR RGA G ++ + GLL + + V+++ + PG H S
Sbjct: 30 GRWSQRLPRGARGA----DRDGFAAFLRAETTGGLLLLAATVAALVWANTAPGTYHTVWS 85

Query: 449 ALYITGIDWLDLAHLTIQRW 508
G WL LA + + W
Sbjct: 86 TPAGLGPSWLHLADMHLTDW 105


>sp|Q8WNU4|K1683_MACFA Uncharacterized protein KIAA1683 homolog
(Fragment) OS=Macaca fascicularis GN=QtsA-12219 PE=2
SV=2
Length = 798

Score = 31.2 bits (69), Expect = 3.1
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Frame = -1

Query: 280 SPPPKILG-IIAKT*PKVHLVHRPALPPLSVCLSGTSN 170
SPP G +AKT P+ H V PA PL CL+ T++
Sbjct: 59 SPPQVCPGPAMAKTPPQTHPVATPAKSPLQTCLAATTS 96


>sp|Q25479|NKCL_MANSE Bumetanide-sensitive
sodium-(potassium)-chloride cotransporter OS=Manduca
sexta PE=2 SV=1
Length = 1060

Score = 30.8 bits (68), Expect = 4.1
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +2

Query: 239 LCLCNNAQDFGRWRDGSPRQKRGAIGSQS*SGNLHYILSGGLAGLLEVESFVSSIWVIQS 418
LC NN ++G S Q A G G LS L LL V + ++ V +
Sbjct: 415 LCALNNTCEYGLHNSYSVMQLMSAWGPFIYGGCWAATLSTALTNLLSVPRLIQALGVDRI 474

Query: 419 YPGPLHF 439
YPG + F
Sbjct: 475 YPGLIFF 481


>sp|O74757|HRD1_SCHPO ERAD-associated E3 ubiquitin-protein ligase
hrd1 OS=Schizosaccharomyces pombe GN=hrd1 PE=1 SV=1
Length = 677

Score = 30.4 bits (67), Expect = 5.3
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Frame = -3

Query: 200 LICVPVRHFKCLRNW------CPTCCH---GESKSPAWSYSSLPTHTYITGFSLLTACCG 48
L C + HF CLRNW CP C G SP + +P + + T
Sbjct: 326 LPCGHILHFHCLRNWLERQQTCPICRRSVIGNQSSP----TGIPASPNVRATQIATQVPN 381

Query: 47 TANTSTS 27
NT T+
Sbjct: 382 PQNTPTT 388


>sp|Q9H0B3|K1683_HUMAN Uncharacterized protein KIAA1683 OS=Homo
sapiens GN=KIAA1683 PE=1 SV=1
Length = 1180

Score = 30.0 bits (66), Expect = 7.0
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = -1

Query: 253 IAKT*PKVHLVHRPALPPLSVCLSGT 176
+AKT P++H V PA PL CLS T
Sbjct: 450 MAKTPPQMHPVTTPAKNPLQTCLSAT 475


>sp|A5UKY3|GLMM_METS3 Probable phosphoglucosamine mutase
OS=Methanobrevibacter smithii (strain PS / ATCC 35061 /
DSM 861) GN=glmM PE=3 SV=2
Length = 445

Score = 30.0 bits (66), Expect = 7.0
Identities = 19/49 (38%), Positives = 28/49 (57%), Gaps = 5/49 (10%)
Frame = -2

Query: 204 HPYLCACP-----ALQMFEELVSNLLPW*VQISSLVIQLPSYPYIYYRV 73
HP C CP L+M ELVSN ++S L++++PSYP I ++
Sbjct: 320 HPDFCMCPDGILSGLRM-AELVSNK----GKLSELLLEIPSYPNIREKI 363


>sp|Q9URU4|YBKF_SCHPO Putative cell agglutination protein C1289.15
OS=Schizosaccharomyces pombe GN=SPBC1289.15 PE=2 SV=1
Length = 1283

Score = 29.6 bits (65), Expect = 9.0
Identities = 18/64 (28%), Positives = 29/64 (45%)
Frame = -3

Query: 266 NLGHYCKDITKSSSGSSPCFTTLICVPVRHFKCLRNWCPTCCHGESKSPAWSYSSLPTHT 87
N G + +T + + + IC+P HF+ +WC S+ WSY ++
Sbjct: 1206 NPGSWTSTVTVQGTSTG----SYICMP--HFQIQYDWCSAGVTDMSECNTWSYQK--SYD 1257

Query: 86 YITG 75
YITG
Sbjct: 1258 YITG 1261


tr_hit_id A7R4N1
Definition tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole genome shotgun sequence OS=Vitis vinifera
Align length 85
Score (bit) 47.0
E-value 0.0006
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912684|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_F11.
(523 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, who... 47 6e-04
tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, who... 47 6e-04
tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabac... 45 0.003
tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuber... 44 0.004
tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome ... 39 0.16
tr|B6HWX6|B6HWX6_PENCH Putative uncharacterized protein Pc24g018... 37 0.60
tr|Q940K2|Q940K2_ARATH Phosphatase-like protein OS=Arabidopsis t... 37 0.78
tr|Q9C5S1|Q9C5S1_ARATH MAP kinase phosphatase OS=Arabidopsis tha... 35 3.0
tr|Q5EAI5|Q5EAI5_ARATH At3g55270 OS=Arabidopsis thaliana PE=2 SV=1 35 3.0
tr|B8BWV1|B8BWV1_THAPS Predicted protein OS=Thalassiosira pseudo... 34 5.0
tr|A9U406|A9U406_PHYPA Predicted protein OS=Physcomitrella paten... 33 8.5
tr|Q99ZR4|Q99ZR4_STRP1 Putative uncharacterized protein (Glutami... 33 8.6
tr|Q82RP2|Q82RP2_STRAW Putative polyketide synthase OS=Streptomy... 33 8.6
tr|Q7CF51|Q7CF51_STRP3 Putative glutamine amidotransferase, clas... 33 8.6
tr|Q5XC89|Q5XC89_STRP6 Glutamine amidotransferase, class I OS=St... 33 8.6
tr|Q48TN0|Q48TN0_STRPM Glutamine amidotransferase, class I OS=St... 33 8.6
tr|Q1JLS2|Q1JLS2_STRPC Glutamine amidotransferase, class I OS=St... 33 8.6
tr|Q1JGX2|Q1JGX2_STRPD Glutamine amidotransferase, class I OS=St... 33 8.6
tr|Q1JBU0|Q1JBU0_STRPB Glutamine amidotransferase, class I OS=St... 33 8.6
tr|Q1J6P1|Q1J6P1_STRPF Glutamine amidotransferase, class I OS=St... 33 8.6
tr|B5XLG7|B5XLG7_STRPZ Glutamine amidotransferase, class I OS=St... 33 8.6
tr|A2REJ9|A2REJ9_STRPG Putative peptidase OS=Streptococcus pyoge... 33 8.6

>tr|A7R4N1|A7R4N1_VITVI Chromosome undetermined scaffold_745, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00004591001 PE=4 SV=1
Length = 818

Score = 47.0 bits (110), Expect = 6e-04
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Frame = +1

Query: 22 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQQVGHQF 162
S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F
Sbjct: 717 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 776

Query: 163 LKHLKCRTGTQIRVVKQGDEPDELL 237
L + + ++VV++G+EP++LL
Sbjct: 777 LTQMGLPSKALVQVVREGEEPEQLL 801


>tr|A7R1D3|A7R1D3_VITVI Chromosome undetermined scaffold_346, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00011883001 PE=4 SV=1
Length = 928

Score = 47.0 bits (110), Expect = 6e-04
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Frame = +1

Query: 22 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQQVGHQF 162
S+ V ++++ + NP V+YVWVG ++ + G D W+ VGH F
Sbjct: 827 SRSVYIMSLVDLNLGTSNPEVLYVWVGHDVSYEKGQSQLTSSDGACKDDHVHWEMVGHNF 886

Query: 163 LKHLKCRTGTQIRVVKQGDEPDELL 237
L + + ++VV++G+EP++LL
Sbjct: 887 LTQMGLPSKALVQVVREGEEPEQLL 911


>tr|Q762M8|Q762M8_TOBAC MAP kinase phosphatase OS=Nicotiana tabacum
GN=NtMKP1 PE=2 SV=1
Length = 862

Score = 44.7 bits (104), Expect = 0.003
Identities = 24/91 (26%), Positives = 46/91 (50%), Gaps = 13/91 (14%)
Frame = +1

Query: 4 ADCFRSSKDVLVLAVPQQAVNRENP-VIYVWVGRELY------------DQAGDLDSPWQ 144
A F S+ V ++ +P ++ + +Y+WVGR++ D W+
Sbjct: 760 ASGFFDSRSVYIIVIPDLNLDENSSNSLYIWVGRDVQWKESPNQVINNESMCEDGHVHWE 819

Query: 145 QVGHQFLKHLKCRTGTQIRVVKQGDEPDELL 237
+VG +FL T + +++VK+G+EP++LL
Sbjct: 820 KVGRRFLIQKGLATSSLVQIVKEGEEPEQLL 850


>tr|Q3V655|Q3V655_SOLTU MAP kinase phosphatase 1 OS=Solanum tuberosum
GN=StMKP1 PE=2 SV=1
Length = 874

Score = 44.3 bits (103), Expect = 0.004
Identities = 24/85 (28%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Frame = +1

Query: 22 SKDVLVLAVPQQAVNRENPV-IYVWVGRELY-----DQAGDLDSP-------WQQVGHQF 162
S+ V ++ +P +++ + +Y+W+GR++ DQ + DS W++VG F
Sbjct: 773 SRSVYIIVIPDLSLDENSSSSLYIWMGRDVQWKESSDQVINNDSMCEDNHVHWEKVGLNF 832

Query: 163 LKHLKCRTGTQIRVVKQGDEPDELL 237
L T + +++VK+G+EP++LL
Sbjct: 833 LIQKGLATSSLVQIVKEGEEPEQLL 857


>tr|A7P490|A7P490_VITVI Chromosome chr1 scaffold_5, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00030744001
PE=4 SV=1
Length = 881

Score = 38.9 bits (89), Expect = 0.16
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 13/75 (17%)
Frame = +1

Query: 22 SKDVLVLAVPQQAVNRENP-VIYVWVGRELYDQAG------------DLDSPWQQVGHQF 162
S+ V ++ P + NP V+YVW+GR + + G D W+ VGH+F
Sbjct: 769 SRSVYIMFAPDSNLGTSNPEVLYVWLGRGVSYEKGQSQLTSSDGTCKDNHVHWEMVGHKF 828

Query: 163 LKHLKCRTGTQIRVV 207
L + R+ I+VV
Sbjct: 829 LAQMGLRSEALIQVV 843


>tr|B6HWX6|B6HWX6_PENCH Putative uncharacterized protein Pc24g01870
OS=Penicillium chrysogenum Wisconsin 54-1255
GN=Pc24g01870 PE=4 SV=1
Length = 456

Score = 37.0 bits (84), Expect = 0.60
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = +1

Query: 256 CPRFWEVARWKSKAEKGRYRL-SELKWEPPLYLIWWAGRAVGS 381
CP+ W WK E+ RY L E W P +IW +GR V S
Sbjct: 243 CPQTWINVEWKDIKEEHRYLLVDECSWTPRTDVIWLSGRKVTS 285


>tr|Q940K2|Q940K2_ARATH Phosphatase-like protein OS=Arabidopsis
thaliana GN=At3g55270/T26I12.150 PE=2 SV=1
Length = 784

Score = 36.6 bits (83), Expect = 0.78
Identities = 22/90 (24%), Positives = 41/90 (45%), Gaps = 13/90 (14%)
Frame = +1

Query: 13 FRSSKDVLVLAVPQQAVNRE-NPVIYVWVGRE--------LYDQAGDLDS----PWQQVG 153
+ S+ V+ + +P AV N +Y+W+G+ L D D+ W Q+G
Sbjct: 691 YLDSESVIAIPLPSDAVGETGNRNLYIWIGKSFSLDNNCSLVDSNKAADTVENVDWVQIG 750

Query: 154 HQFLKHLKCRTGTQIRVVKQGDEPDELLVM 243
L + T I++V++ ++ ELL +
Sbjct: 751 ESILCQMDLPKDTPIKIVRESEDQTELLAL 780


>tr|Q9C5S1|Q9C5S1_ARATH MAP kinase phosphatase OS=Arabidopsis
thaliana GN=MKP1 PE=2 SV=1
Length = 784

Score = 34.7 bits (78), Expect = 3.0
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Frame = +1

Query: 13 FRSSKDVLVLAVPQQAVNRENPV-IYVWVGRE--------LYDQAGDLDS----PWQQVG 153
+ S+ V+ + +P AV +Y+W+G+ L D D+ W Q+G
Sbjct: 691 YLDSESVIAIPLPSDAVGETGSRNLYIWIGKSFSLDNNCSLVDSNKAADTVENVDWVQIG 750

Query: 154 HQFLKHLKCRTGTQIRVVKQGDEPDELLVM 243
L + T I++V++ ++ ELL +
Sbjct: 751 ESILCQMDLPKDTPIKIVRESEDQTELLAL 780


>tr|Q5EAI5|Q5EAI5_ARATH At3g55270 OS=Arabidopsis thaliana PE=2 SV=1
Length = 534

Score = 34.7 bits (78), Expect = 3.0
Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 13/90 (14%)
Frame = +1

Query: 13 FRSSKDVLVLAVPQQAVNRENPV-IYVWVGRE--------LYDQAGDLDS----PWQQVG 153
+ S+ V+ + +P AV +Y+W+G+ L D D+ W Q+G
Sbjct: 441 YLDSESVIAIPLPSDAVGETGSRNLYIWIGKSFSLDNNCSLVDSNKAADTVENVDWVQIG 500

Query: 154 HQFLKHLKCRTGTQIRVVKQGDEPDELLVM 243
L + T I++V++ ++ ELL +
Sbjct: 501 ESILCQMDLPKDTPIKIVRESEDQTELLAL 530


>tr|B8BWV1|B8BWV1_THAPS Predicted protein OS=Thalassiosira
pseudonana CCMP1335 GN=THAPSDRAFT_21603 PE=4 SV=1
Length = 745

Score = 33.9 bits (76), Expect = 5.0
Identities = 33/133 (24%), Positives = 57/133 (42%), Gaps = 11/133 (8%)
Frame = -3

Query: 434 VRDLGKTVLPKLNLQNFLLPTALPAHQIRYSGGSHFSSESL*RPFSALDFHLATSQNLGH 255
+R +GK VLP LN + + PA Q SH S S ++S +
Sbjct: 1 MRSIGKPVLPSLNCEELQTEPSAPADQ------SHVVSSS------------SSSSSEQE 42

Query: 254 YCKDITKSSSGSSPCFTTLIC------VPVRHFKCL-----RNWCPTCCHGESKSPAWSY 108
+C + ++S+ + FTT+I +P+ H CL R T C+G S + ++
Sbjct: 43 HCYTLHRASNLAPTFFTTMITAVAVLQLPIAH--CLLTPIQRLPMHTSCNGRSSTTPFAC 100

Query: 107 SSLPTHTYITGFS 69
+ P+ ++ S
Sbjct: 101 PTYPSRRILSSSS 113