| BP912685 |
| Clone id |
YMU001_000021_F12 |
| Library |
YMU01 |
| Length |
535 |
| Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_F12. |
| Accession |
BP912685 |
| Tissue type |
prothallium |
| Developmental stage |
- |
| Contig ID |
CL515Contig1 |
| Sequence |
GTTGGCAAATGAGTCACTGTAAGCAGCCATGCCAAGGGGCTGTAGCACAGAAATACTCCA TCCCTTTTACTTGAAACTCAAATCAGCATCCTTCTCTTCATGGGGCGCTTGCTCCTAGCA CTTGCATCATCATCATTGTCAGCTTGCCCTTCACTGTCATCCTCACCAGCCCCCAGCTCA ATTGTTAATTCGCATGGTTCAGATGAAGTGCGGCCTCTATTTCGAGAATTTTTCCTAATG GGAGTAGAAGGGGCCTGAGAAGCCATAGCCTGCTGACTCCTCTTGGGCATAAGCTCTGCC CCTTGTTCCACCATCTCCTTCATCAAAATCCAGTCTTTGAAGTCAAATCTAAAGACAAAT TGAGTATTCACAACTTGTTGCTGTTCTTCAACTCCCTGAGGCCTCCCTGCCCTTTCAGCA GCAGTAGGAGCATACCTGAATGCCACAAACTGCTTTCCATCCTGTATTGTAATTTGGGCA CGACCATCTTTCACCAAAAATGAGAGAGAGAAGATATTTTCTACAGTATGAGAAA |
| ■■Homology search results ■■ |
- |
| Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
| sp_hit_id |
Q566X8 |
| Definition |
sp|Q566X8|DMX1B_DANRE Diencephalon/mesencephalon homeobox protein 1-B OS=Danio rerio |
| Align length |
75 |
| Score (bit) |
36.6 |
| E-value |
0.078 |
| Report |
 |
| TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
| tr_hit_id |
A9TPF3 |
| Definition |
tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens |
| Align length |
151 |
| Score (bit) |
105.0 |
| E-value |
2.0e-21 |
| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912685|Adiantum capillus-veneris mRNA, clone: YMU001_000021_F12. (535 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomit... 105 2e-21 tr|B4FDX3|B4FDX3_MAIZE Putative uncharacterized protein OS=Zea m... 97 4e-19 tr|B6TF46|B6TF46_MAIZE Putative uncharacterized protein OS=Zea m... 96 9e-19 tr|B4FSE7|B4FSE7_MAIZE Putative uncharacterized protein OS=Zea m... 96 9e-19 tr|A7PVV4|A7PVV4_VITVI Chromosome chr8 scaffold_34, whole genome... 91 5e-17 tr|A7NZZ7|A7NZZ7_VITVI Chromosome chr6 scaffold_3, whole genome ... 89 1e-16 tr|Q9C689|Q9C689_ARATH Putative uncharacterized protein F23H24.4... 88 3e-16 tr|B8AJA9|B8AJA9_ORYSI Putative uncharacterized protein OS=Oryza... 86 2e-15 tr|Q7EXY7|Q7EXY7_ORYSJ Os08g0510900 protein OS=Oryza sativa subs... 81 3e-14 tr|B8BCB8|B8BCB8_ORYSI Putative uncharacterized protein OS=Oryza... 81 3e-14 tr|Q69XQ4|Q69XQ4_ORYSJ Os06g0618000 protein OS=Oryza sativa subs... 78 2e-13 tr|B8B4M1|B8B4M1_ORYSI Putative uncharacterized protein OS=Oryza... 78 2e-13 tr|B6V8G0|B6V8G0_HELAN COG5125-like protein OS=Helianthus annuus... 77 4e-13 tr|A3BUR1|A3BUR1_ORYSJ Putative uncharacterized protein OS=Oryza... 77 7e-13 tr|A3A434|A3A434_ORYSJ Putative uncharacterized protein OS=Oryza... 74 4e-12 tr|Q9LT44|Q9LT44_ARATH Arabidopsis thaliana genomic DNA, chromos... 72 1e-11 tr|Q6K3M6|Q6K3M6_ORYSJ Putative uncharacterized protein OSJNBb00... 59 1e-07 tr|A8J9Q8|A8J9Q8_CHLRE Predicted protein OS=Chlamydomonas reinha... 52 2e-05 tr|A7RIG0|A7RIG0_NEMVE Predicted protein OS=Nematostella vectens... 46 0.001 tr|B6N5Z4|B6N5Z4_BRAFL Putative uncharacterized protein OS=Branc... 45 0.002 tr|A6QTK1|A6QTK1_AJECN Putative uncharacterized protein OS=Ajell... 44 0.004 tr|Q1DSE4|Q1DSE4_COCIM Putative uncharacterized protein OS=Cocci... 44 0.005 tr|B8B6H7|B8B6H7_ORYSI Putative uncharacterized protein OS=Oryza... 43 0.012 tr|B2WHM7|B2WHM7_PYRTR Putative uncharacterized protein OS=Pyren... 42 0.020 tr|B8MDA1|B8MDA1_9EURO Nuclear protein Qri2/Nse4, putative OS=Ta... 42 0.026 tr|A1CAJ2|A1CAJ2_ASPCL Nuclear protein Qri2/Nse4, putative OS=As... 40 0.057 tr|Q2U4A2|Q2U4A2_ASPOR Uncharacterized conserved protein OS=Aspe... 40 0.075 tr|B8NTQ8|B8NTQ8_ASPFL Nuclear protein Qri2/Nse4, putative OS=As... 40 0.075 tr|Q0CKJ6|Q0CKJ6_ASPTN Putative uncharacterized protein OS=Asper... 40 0.098 tr|B6HNJ0|B6HNJ0_PENCH Pc21g00580 protein OS=Penicillium chrysog... 40 0.098
>tr|A9TPF3|A9TPF3_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_148594 PE=4 SV=1 Length = 321
Score = 105 bits (261), Expect = 2e-21 Identities = 69/151 (45%), Positives = 87/151 (57%), Gaps = 4/151 (2%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 S TVENIFSLSFL+KDGRA IT +DG VA + AP++ +R + QV NTQF Sbjct: 188 SQTVENIFSLSFLIKDGRAAITYDKDGTHLVAPKNAPSSHDR--------QSGQVTNTQF 239
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKRSQ--QAMASQAPSTPIRKNSRNRGRTSSEPCELT 183 VFR+D+ W M+E +E GAELMP R + + STPIRK+SRNRGR S Sbjct: 240 VFRYDWTCWQTMQEKLEAGAELMPDRQSTLDPLLQPSQSTPIRKHSRNRGRESR------ 293
Query: 182 IELGAGEDDSEGQADNDDDASAR-SKRPMKR 93 A +++G +DA R SKR R Sbjct: 294 ---NANNPENDGDDVEPEDAGQRHSKRARGR 321
>tr|B4FDX3|B4FDX3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 396
Score = 97.4 bits (241), Expect = 4e-19 Identities = 65/148 (43%), Positives = 76/148 (51%), Gaps = 14/148 (9%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVENIF+LSFLVKDGR +I + D G FV R AP A+ A VV F Sbjct: 226 AQTVENIFALSFLVKDGRVEIKVNDQGHHFVYPRNAPVASAVASG--------DVVYNHF 277
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKRSQQAMAS-------------QAPSTPIRKNSRNR 216 VFRFDFKDW LMK +V +G ELMP RS Q +A+ PST IRK RNR Sbjct: 278 VFRFDFKDWKLMKGVVPEGEELMPHRSSQTIANTGGNNPTQSEAPLATPSTTIRKLCRNR 337
Query: 215 GRTSSEPCELTIELGAGEDDSEGQADND 132 G + T G E + ND Sbjct: 338 GLILQDELIATGAYGVMEQEMLAMGTND 365
>tr|B6TF46|B6TF46_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 352
Score = 96.3 bits (238), Expect = 9e-19 Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 11/118 (9%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFV 354 + TVEN+F+LSFLVKDGR +IT+ D V R AP A+ A +V + FV Sbjct: 215 AQTVENVFALSFLVKDGRVEITVDDSGHIVRPRNAPAASAIASG--------EVSYSHFV 266
Query: 353 FRFDFKDWILMKEMVEQGAELMPKRSQQA-----------MASQAPSTPIRKNSRNRG 213 FRFDFKDW LMKE+V +G EL+P R+ Q+ + ++A TPIRK +RNRG Sbjct: 267 FRFDFKDWKLMKEVVTEGEELLPHRTSQSNLCNEENDQPNLEARAQITPIRKLTRNRG 324
>tr|B4FSE7|B4FSE7_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 352
Score = 96.3 bits (238), Expect = 9e-19 Identities = 55/118 (46%), Positives = 72/118 (61%), Gaps = 11/118 (9%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQFV 354 + TVEN+F+LSFLVKDGR +IT+ D V R AP A+ A +V + FV Sbjct: 215 AQTVENVFALSFLVKDGRVEITVDDSGHIVRPRNAPAASAIASG--------EVSYSHFV 266
Query: 353 FRFDFKDWILMKEMVEQGAELMPKRSQQA-----------MASQAPSTPIRKNSRNRG 213 FRFDFKDW LMKE+V +G EL+P R+ Q+ + ++A TPIRK +RNRG Sbjct: 267 FRFDFKDWKLMKEVVTEGEELLPHRTSQSNLCNEENDQPNLEARAQITPIRKLTRNRG 324
>tr|A7PVV4|A7PVV4_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025372001 PE=4 SV=1 Length = 380
Score = 90.5 bits (223), Expect = 5e-17 Identities = 61/146 (41%), Positives = 78/146 (53%), Gaps = 15/146 (10%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVEN+F+LSFLVKDGRA+IT+ G V+ R AP A +V F Sbjct: 232 AQTVENLFALSFLVKDGRAEITVDGRGCHLVSPRNAPAA--------NAVVSGEVCYNHF 283
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKR--------------SQQAMASQAPSTPIRKNSRN 219 VFRFDFKDW LM V G ELMP+R +++ A+ AP+TPIRK SRN Sbjct: 284 VFRFDFKDWKLMATSVGAGEELMPQRNSVNLPNNSQTDSVAEECEAAAAPTTPIRKLSRN 343
Query: 218 RGRTSSEPCELTIELGAGEDDSEGQA 141 RG E + +E DD+ +A Sbjct: 344 RGLVLQE--QAVVEDSPESDDAGTRA 367
>tr|A7NZZ7|A7NZZ7_VITVI Chromosome chr6 scaffold_3, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00024708001 PE=4 SV=1 Length = 377
Score = 89.0 bits (219), Expect = 1e-16 Identities = 65/159 (40%), Positives = 85/159 (53%), Gaps = 14/159 (8%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVEN+F+LSFLVKDGRA++ + ++G V+ + AP A+ R +VV + F Sbjct: 233 ARTVENLFALSFLVKDGRAEVVVDENGSHLVSPKNAPAASSVVAR--------EVVYSHF 284
Query: 356 VFRFDFKDWILMKEMVEQGAELMP--KRSQQAMASQA-----------PSTPIRKNSRNR 216 VFRFDFKDW LM ++V G ELMP RS+ ASQA +TPI+K SRN Sbjct: 285 VFRFDFKDWKLMMDLVPAGEELMPHRDRSKGLNASQAGLAPNDYQDTLHATPIKKFSRNC 344
Query: 215 GRTSSEPCELTIELGAGEDDSEGQADNDDDASARSKRPM 99 G E +L ED D D A R KR + Sbjct: 345 GLVIQE------QLVVKED-----PDTGDAAGRRCKRKL 372
>tr|Q9C689|Q9C689_ARATH Putative uncharacterized protein F23H24.4 (Putative uncharacterized protein At1g51130) OS=Arabidopsis thaliana GN=At1g51130 PE=2 SV=1 Length = 403
Score = 87.8 bits (216), Expect = 3e-16 Identities = 63/165 (38%), Positives = 77/165 (46%), Gaps = 16/165 (9%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITI-QDGKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVEN+F+LSFL KDGR +I + + G F R AP A V +V+ F Sbjct: 258 AQTVENLFALSFLAKDGRVEIIVDKSGSHFAMPRNAPDA--------NVVMSGEVIYNHF 309
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKRSQQAMASQAP---------------STPIRKNSR 222 VFR DFKDW LM EMV G ELMP R +S P +TPIRK SR Sbjct: 310 VFRLDFKDWKLMSEMVPLGEELMPHRQTAVASSSCPAASAPASADFTQDTQTTPIRKLSR 369
Query: 221 NRGRTSSEPCELTIELGAGEDDSEGQADNDDDASARSKRPMKRRM 87 NRG E E +E D D ++R KRR+ Sbjct: 370 NRGLVVQE--ETVVE------------DTPDKEGDGTRRRCKRRL 400
>tr|B8AJA9|B8AJA9_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06217 PE=4 SV=1 Length = 360
Score = 85.5 bits (210), Expect = 2e-15 Identities = 53/120 (44%), Positives = 67/120 (55%), Gaps = 13/120 (10%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQDGKQFVAF-RYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVEN+F+LSFLVKDGR I I D + + R AP A+ A +V + F Sbjct: 217 AQTVENVFALSFLVKDGRVAINIDDNGHHIVYPRNAPAASAIASG--------EVSYSHF 268
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKRSQQAMASQ------------APSTPIRKNSRNRG 213 VFRFDFKDW LM+E+V G ELMP R+ + + A TPIRK +RNRG Sbjct: 269 VFRFDFKDWKLMQEVVPDGEELMPHRNPENIPCAEDHDQADPPELCAQRTPIRKLTRNRG 328
>tr|Q7EXY7|Q7EXY7_ORYSJ Os08g0510900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0016N23.127 PE=4 SV=1 Length = 397
Score = 81.3 bits (199), Expect = 3e-14 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVENIF+LSFLVKDGR +I + D G FV R AP A R +V+N+Q+ Sbjct: 253 AQTVENIFALSFLVKDGRVEIDVDDKGNHFVVPRNAPAAELITSR--------EVINSQY 304
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKR 279 VFRFD KDW +M+ +VE G ELMP R Sbjct: 305 VFRFDTKDWKIMEGVVEPGDELMPHR 330
>tr|B8BCB8|B8BCB8_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29840 PE=4 SV=1 Length = 396
Score = 81.3 bits (199), Expect = 3e-14 Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%) Frame = -3
Query: 533 SHTVENIFSLSFLVKDGRAQITIQD-GKQFVAFRYAPTAAERAGRPQGVEEQQQVVNTQF 357 + TVENIF+LSFLVKDGR +I + D G FV R AP A R +V+N+Q+ Sbjct: 252 AQTVENIFALSFLVKDGRVEIDVDDKGNHFVVPRNAPAAELITSR--------EVINSQY 303
Query: 356 VFRFDFKDWILMKEMVEQGAELMPKR 279 VFRFD KDW +M+ +VE G ELMP R Sbjct: 304 VFRFDTKDWKIMEGVVEPGDELMPHR 329
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