BP912692
Clone id YMU001_000021_G08
Library
Length 442
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_G08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTTTTTTTTTTTTAGCTGTCAAAAATACATTTCAACCGGTTCTTCGATCTG
TACAAATATGGTAAGAACTACCTTACTGGTTGTGTAGATCTCCAACAACAAATACATACA
TTACAGAGGCAGTGACCTAAGATAGCTATCAAGCTTCATTAACTCTTTCCAAAAACGCAC
CAAATAATGAAAGCGGACATCCCTTCCTTGGTGCTAAAATAGGATCCAGCTCGAATATAA
CATTACGCTACATTGGCAGCAGCATTACCAGGTATCAAGCTTCTTTTACTCTTCCCAAAA
TCGCACTAAAGAATAAATGCGGGCATCATTTCCTTGGTGTTGAAGCAGGATCCAACTCAA
AACAACCTTTGACACAATCTGGAACTTCTCCTGCAGTGAGCTGATGTACTGGTATGTNAT
GAGAAAACCTTCGCATCTCATT
■■Homology search results ■■ -
sp_hit_id Q8KC36
Definition sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobium tepidum
Align length 42
Score (bit) 30.4
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912692|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G08.
(420 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobi... 30 2.9
sp|P29994|ITPR1_RAT Inositol 1,4,5-trisphosphate receptor type 1... 30 3.0
sp|P11881|ITPR1_MOUSE Inositol 1,4,5-trisphosphate receptor type... 30 3.0
sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type... 30 3.0
sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type... 30 3.0
sp|Q6CFE7|REXO3_YARLI RNA exonuclease 3 OS=Yarrowia lipolytica G... 30 3.8
sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, c... 29 6.4
sp|A3MV61|RNZ_PYRCJ Ribonuclease Z OS=Pyrobaculum calidifontis (... 29 8.4

>sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobium
tepidum GN=glyA PE=3 SV=1
Length = 440

Score = 30.4 bits (67), Expect = 2.9
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3

Query: 6 SKIHFN-RFFDLYKYGKNYLTGCVDLQQQIHTLQRQ*PKIAI 128
SK++F+ +FFD + YG + TG +D+ + +R PK+ I
Sbjct: 129 SKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKLII 170


>sp|P29994|ITPR1_RAT Inositol 1,4,5-trisphosphate receptor type 1
OS=Rattus norvegicus GN=Itpr1 PE=1 SV=2
Length = 2750

Score = 30.4 bits (67), Expect = 3.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241
N + RF H H L A PD + C E P+ P + S + ++ Y ++
Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356

Query: 240 LLPM*RNV--IFELDP 199
+P ++ IFELDP
Sbjct: 357 SVPEGNDISSIFELDP 372


>sp|P11881|ITPR1_MOUSE Inositol 1,4,5-trisphosphate receptor type 1
OS=Mus musculus GN=Itpr1 PE=1 SV=1
Length = 2749

Score = 30.4 bits (67), Expect = 3.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241
N + RF H H L A PD + C E P+ P + S + ++ Y ++
Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356

Query: 240 LLPM*RNV--IFELDP 199
+P ++ IFELDP
Sbjct: 357 SVPEGNDISSIFELDP 372


>sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type 1
OS=Homo sapiens GN=ITPR1 PE=1 SV=2
Length = 2758

Score = 30.4 bits (67), Expect = 3.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241
N + RF H H L A PD + C E P+ P + S + ++ Y ++
Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356

Query: 240 LLPM*RNV--IFELDP 199
+P ++ IFELDP
Sbjct: 357 SVPEGNDISSIFELDP 372


>sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type 1
OS=Bos taurus GN=ITPR1 PE=1 SV=1
Length = 2709

Score = 30.4 bits (67), Expect = 3.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241
N + RF H H L A PD + C E P+ P + S + ++ Y ++
Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356

Query: 240 LLPM*RNV--IFELDP 199
+P ++ IFELDP
Sbjct: 357 SVPEGNDISSIFELDP 372


>sp|Q6CFE7|REXO3_YARLI RNA exonuclease 3 OS=Yarrowia lipolytica
GN=REX3 PE=3 SV=1
Length = 757

Score = 30.0 bits (66), Expect = 3.8
Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2

Query: 86 TNTYITEAVT*DSYQASLTLSKNAPN-NESGHPFLG--AKIGSSSNITLRYIGSSITRYQ 256
T+ +IT ++ S Q + SK P ++G+P K G SNI +++ R
Sbjct: 346 TSGHITSSI---SNQLDMLASKTKPLLAQNGYPVNPDPLKSGLPSNIGIQHCD----RCD 398

Query: 257 ASFTLPKIALKNKCGHHFLGVEAGSNSKQP 346
+F +PK+ C +H+ G NS P
Sbjct: 399 KAFDVPKVDNYGSCKYHWARARMGGNSTMP 428


>sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein,
chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2
Length = 435

Score = 29.3 bits (64), Expect = 6.4
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +3

Query: 153 THQIMKADIPSLVLK*DPARI*HYATLAAALPGIKLLLLF 272
T+ +++ VL + A + HYA A+ P IKLLLL+
Sbjct: 309 TNYLLRESANPFVLDDEGATLMHYAVQTASAPTIKLLLLY 348


>sp|A3MV61|RNZ_PYRCJ Ribonuclease Z OS=Pyrobaculum calidifontis
(strain JCM 11548 / VA1) GN=rnz PE=3 SV=1
Length = 287

Score = 28.9 bits (63), Expect = 8.4
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2

Query: 215 ITLRYIGSSITRYQASFTLPKIALKNKCGHHFLGVEAGSNSKQPLTQSGTSPA 373
+ L ++G+ +A LP I L++ GH L ++AG ++ L Q G SPA
Sbjct: 4 LKLVFLGTGGAVPKADRMLPAIYLEDWLGHRVL-LDAGEGAQYRLLQVGVSPA 55


tr_hit_id Q8RYF9
Definition tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative uncharacterized protein) (Os01g0923800 protein) OS=Oryza sativa subsp. japonica
Align length 37
Score (bit) 50.1
E-value 6.0e-05
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912692|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G08.
(420 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative unchara... 50 6e-05
tr|A2WYI5|A2WYI5_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05
tr|A7QP45|A7QP45_VITVI Chromosome chr1 scaffold_136, whole genom... 47 5e-04
tr|Q9SLA7|Q9SLA7_ARATH At2g25560/F13B15.22 (Putative DnaJ protei... 44 0.003
tr|Q1EPG9|Q1EPG9_MUSAC Heat shock protein DnaJ N-terminal domain... 44 0.003
tr|A7PHJ3|A7PHJ3_VITVI Chromosome chr17 scaffold_16, whole genom... 44 0.003
tr|A5AWU3|A5AWU3_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003
tr|Q7XKR2|Q7XKR2_ORYSJ OSJNBa0053B21.9 protein OS=Oryza sativa s... 42 0.020
tr|Q6K2F0|Q6K2F0_ORYSJ Os02g0510000 protein OS=Oryza sativa subs... 42 0.020
tr|Q0JDP0|Q0JDP0_ORYSJ Os04g0388800 protein (Fragment) OS=Oryza ... 42 0.020
tr|Q01LE1|Q01LE1_ORYSA OSIGBa0096P03.4 protein OS=Oryza sativa G... 42 0.020
tr|A9TAD2|A9TAD2_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.020
tr|A3AT90|A3AT90_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.020
tr|A2XSS7|A2XSS7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020
tr|A2X592|A2X592_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020
tr|A7PHJ4|A7PHJ4_VITVI Chromosome chr17 scaffold_16, whole genom... 41 0.026
tr|O04648|O04648_ARATH A_TM021B04.9 protein OS=Arabidopsis thali... 41 0.034
tr|A9RBW3|A9RBW3_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.044
tr|Q9CAW0|Q9CAW0_ARATH Putative uncharacterized protein T9J14.9 ... 40 0.057
tr|A8MR58|A8MR58_ARATH Uncharacterized protein At3g04960.1 (At3g... 40 0.057
tr|A8MQS7|A8MQS7_ARATH Uncharacterized protein At3g04960.2 OS=Ar... 40 0.057
tr|A7QTV7|A7QTV7_VITVI Chromosome undetermined scaffold_171, who... 40 0.057
tr|A7NW98|A7NW98_VITVI Chromosome chr5 scaffold_2, whole genome ... 40 0.075
tr|Q9FGM2|Q9FGM2_ARATH DnaJ protein-like OS=Arabidopsis thaliana... 39 0.098
tr|Q6NMG4|Q6NMG4_ARATH At5g53150 OS=Arabidopsis thaliana PE=2 SV=1 39 0.098
tr|A7QX12|A7QX12_VITVI Chromosome chr14 scaffold_211, whole geno... 39 0.098
tr|A9S6V0|A9S6V0_PHYPA Predicted protein (Fragment) OS=Physcomit... 39 0.13
tr|B4F8T9|B4F8T9_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.17
tr|A7Q327|A7Q327_VITVI Chromosome chr12 scaffold_47, whole genom... 39 0.17
tr|A5B022|A5B022_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17

>tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative
uncharacterized protein) (Os01g0923800 protein) OS=Oryza
sativa subsp. japonica GN=P0592G05.23 PE=4 SV=1
Length = 744

Score = 50.1 bits (118), Expect = 6e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK 307
EM RFSH +P H LT E + KGC+ELDP STP++
Sbjct: 697 EMLRFSHQVPFHVLTGEEAKNSPKGCYELDPGSTPKE 733


>tr|A2WYI5|A2WYI5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04986 PE=4 SV=1
Length = 744

Score = 50.1 bits (118), Expect = 6e-05
Identities = 21/37 (56%), Positives = 26/37 (70%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK 307
EM RFSH +P H LT E + KGC+ELDP STP++
Sbjct: 697 EMLRFSHQVPFHVLTGEEAKNSPKGCYELDPGSTPKE 733


>tr|A7QP45|A7QP45_VITVI Chromosome chr1 scaffold_136, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00002795001
PE=4 SV=1
Length = 817

Score = 47.0 bits (110), Expect = 5e-04
Identities = 21/35 (60%), Positives = 24/35 (68%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
EM RFSH +P + LT E P KGC ELDPA+TP
Sbjct: 700 EMFRFSHHVPSYLLTGQEAPSAPKGCRELDPAATP 734


>tr|Q9SLA7|Q9SLA7_ARATH At2g25560/F13B15.22 (Putative DnaJ protein)
OS=Arabidopsis thaliana GN=At2g25560 PE=2 SV=1
Length = 656

Score = 44.3 bits (103), Expect = 0.003
Identities = 19/36 (52%), Positives = 25/36 (69%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
+E+ RFSH IP + LT E P +GC +LDPA+TP
Sbjct: 610 DEISRFSHKIPSYLLTGQEAPGAPRGCRQLDPAATP 645


>tr|Q1EPG9|Q1EPG9_MUSAC Heat shock protein DnaJ N-terminal
domain-containing protein OS=Musa acuminata
GN=MA4_106O17.46 PE=4 SV=1
Length = 1015

Score = 44.3 bits (103), Expect = 0.003
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = -1

Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
NE+ RFSH IP ++LT E +GC ELDPAS P
Sbjct: 678 NEILRFSHNIPSYRLTGTEKESIPRGCLELDPASLP 713


>tr|A7PHJ3|A7PHJ3_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017963001
PE=4 SV=1
Length = 679

Score = 44.3 bits (103), Expect = 0.003
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
E+ RFSH +P + LT E + KGC ELDPA+TP
Sbjct: 616 ELFRFSHQVPSYLLTGQEAENAPKGCLELDPAATP 650


>tr|A5AWU3|A5AWU3_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_001272 PE=4 SV=1
Length = 951

Score = 44.3 bits (103), Expect = 0.003
Identities = 19/35 (54%), Positives = 24/35 (68%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
E+ RFSH +P + LT E + KGC ELDPA+TP
Sbjct: 823 ELFRFSHQVPSYLLTGQEAENAPKGCLELDPAATP 857


>tr|Q7XKR2|Q7XKR2_ORYSJ OSJNBa0053B21.9 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0053B21.9 PE=4 SV=2
Length = 729

Score = 41.6 bits (96), Expect = 0.020
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
E+ RFSH +P LT E + KGC ELDPA+TP
Sbjct: 675 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 709


>tr|Q6K2F0|Q6K2F0_ORYSJ Os02g0510000 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0052M16.36 PE=4 SV=1
Length = 734

Score = 41.6 bits (96), Expect = 0.020
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
E+ RFSH +P LT E + KGC ELDPA+TP
Sbjct: 680 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 714


>tr|Q0JDP0|Q0JDP0_ORYSJ Os04g0388800 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os04g0388800 PE=4 SV=1
Length = 598

Score = 41.6 bits (96), Expect = 0.020
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = -1

Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313
E+ RFSH +P LT E + KGC ELDPA+TP
Sbjct: 544 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 578