BP912692 |
Clone id |
YMU001_000021_G08 |
Library |
YMU01 |
Length |
442 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000021_G08. |
Accession |
BP912692 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1002Contig1 |
Sequence |
TTTTTTTTTTTTTTTTTTTTTTAGCTGTCAAAAATACATTTCAACCGGTTCTTCGATCTG TACAAATATGGTAAGAACTACCTTACTGGTTGTGTAGATCTCCAACAACAAATACATACA TTACAGAGGCAGTGACCTAAGATAGCTATCAAGCTTCATTAACTCTTTCCAAAAACGCAC CAAATAATGAAAGCGGACATCCCTTCCTTGGTGCTAAAATAGGATCCAGCTCGAATATAA CATTACGCTACATTGGCAGCAGCATTACCAGGTATCAAGCTTCTTTTACTCTTCCCAAAA TCGCACTAAAGAATAAATGCGGGCATCATTTCCTTGGTGTTGAAGCAGGATCCAACTCAA AACAACCTTTGACACAATCTGGAACTTCTCCTGCAGTGAGCTGATGTACTGGTATGTNAT GAGAAAACCTTCGCATCTCATT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q8KC36 |
Definition |
sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobium tepidum |
Align length |
42 |
Score (bit) |
30.4 |
E-value |
2.9 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912692|Adiantum capillus-veneris mRNA, clone: YMU001_000021_G08. (420 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobi... 30 2.9 sp|P29994|ITPR1_RAT Inositol 1,4,5-trisphosphate receptor type 1... 30 3.0 sp|P11881|ITPR1_MOUSE Inositol 1,4,5-trisphosphate receptor type... 30 3.0 sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type... 30 3.0 sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type... 30 3.0 sp|Q6CFE7|REXO3_YARLI RNA exonuclease 3 OS=Yarrowia lipolytica G... 30 3.8 sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, c... 29 6.4 sp|A3MV61|RNZ_PYRCJ Ribonuclease Z OS=Pyrobaculum calidifontis (... 29 8.4
>sp|Q8KC36|GLYA_CHLTE Serine hydroxymethyltransferase OS=Chlorobium tepidum GN=glyA PE=3 SV=1 Length = 440
Score = 30.4 bits (67), Expect = 2.9 Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 1/42 (2%) Frame = +3
Query: 6 SKIHFN-RFFDLYKYGKNYLTGCVDLQQQIHTLQRQ*PKIAI 128 SK++F+ +FFD + YG + TG +D+ + +R PK+ I Sbjct: 129 SKVNFSGQFFDAHSYGVDKETGIIDMNKVEEMARRVKPKLII 170
>sp|P29994|ITPR1_RAT Inositol 1,4,5-trisphosphate receptor type 1 OS=Rattus norvegicus GN=Itpr1 PE=1 SV=2 Length = 2750
Score = 30.4 bits (67), Expect = 3.0 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241 N + RF H H L A PD + C E P+ P + S + ++ Y ++ Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356
Query: 240 LLPM*RNV--IFELDP 199 +P ++ IFELDP Sbjct: 357 SVPEGNDISSIFELDP 372
>sp|P11881|ITPR1_MOUSE Inositol 1,4,5-trisphosphate receptor type 1 OS=Mus musculus GN=Itpr1 PE=1 SV=1 Length = 2749
Score = 30.4 bits (67), Expect = 3.0 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241 N + RF H H L A PD + C E P+ P + S + ++ Y ++ Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356
Query: 240 LLPM*RNV--IFELDP 199 +P ++ IFELDP Sbjct: 357 SVPEGNDISSIFELDP 372
>sp|Q14643|ITPR1_HUMAN Inositol 1,4,5-trisphosphate receptor type 1 OS=Homo sapiens GN=ITPR1 PE=1 SV=2 Length = 2758
Score = 30.4 bits (67), Expect = 3.0 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241 N + RF H H L A PD + C E P+ P + S + ++ Y ++ Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356
Query: 240 LLPM*RNV--IFELDP 199 +P ++ IFELDP Sbjct: 357 SVPEGNDISSIFELDP 372
>sp|Q9TU34|ITPR1_BOVIN Inositol 1,4,5-trisphosphate receptor type 1 OS=Bos taurus GN=ITPR1 PE=1 SV=1 Length = 2709
Score = 30.4 bits (67), Expect = 3.0 Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 2/76 (2%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK*CPHLFFSAILGRVKEA*YLVM 241 N + RF H H L A PD + C E P+ P + S + ++ Y ++ Sbjct: 300 NSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVDPDQDASR---SRLRNAQEKMVYSLV 356
Query: 240 LLPM*RNV--IFELDP 199 +P ++ IFELDP Sbjct: 357 SVPEGNDISSIFELDP 372
>sp|Q6CFE7|REXO3_YARLI RNA exonuclease 3 OS=Yarrowia lipolytica GN=REX3 PE=3 SV=1 Length = 757
Score = 30.0 bits (66), Expect = 3.8 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 3/90 (3%) Frame = +2
Query: 86 TNTYITEAVT*DSYQASLTLSKNAPN-NESGHPFLG--AKIGSSSNITLRYIGSSITRYQ 256 T+ +IT ++ S Q + SK P ++G+P K G SNI +++ R Sbjct: 346 TSGHITSSI---SNQLDMLASKTKPLLAQNGYPVNPDPLKSGLPSNIGIQHCD----RCD 398
Query: 257 ASFTLPKIALKNKCGHHFLGVEAGSNSKQP 346 +F +PK+ C +H+ G NS P Sbjct: 399 KAFDVPKVDNYGSCKYHWARARMGGNSTMP 428
>sp|Q05753|AKRP_ARATH Ankyrin repeat domain-containing protein, chloroplastic OS=Arabidopsis thaliana GN=AKRP PE=1 SV=2 Length = 435
Score = 29.3 bits (64), Expect = 6.4 Identities = 15/40 (37%), Positives = 23/40 (57%) Frame = +3
Query: 153 THQIMKADIPSLVLK*DPARI*HYATLAAALPGIKLLLLF 272 T+ +++ VL + A + HYA A+ P IKLLLL+ Sbjct: 309 TNYLLRESANPFVLDDEGATLMHYAVQTASAPTIKLLLLY 348
>sp|A3MV61|RNZ_PYRCJ Ribonuclease Z OS=Pyrobaculum calidifontis (strain JCM 11548 / VA1) GN=rnz PE=3 SV=1 Length = 287
Score = 28.9 bits (63), Expect = 8.4 Identities = 18/53 (33%), Positives = 29/53 (54%) Frame = +2
Query: 215 ITLRYIGSSITRYQASFTLPKIALKNKCGHHFLGVEAGSNSKQPLTQSGTSPA 373 + L ++G+ +A LP I L++ GH L ++AG ++ L Q G SPA Sbjct: 4 LKLVFLGTGGAVPKADRMLPAIYLEDWLGHRVL-LDAGEGAQYRLLQVGVSPA 55
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q8RYF9 |
Definition |
tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative uncharacterized protein) (Os01g0923800 protein) OS=Oryza sativa subsp. japonica |
Align length |
37 |
Score (bit) |
50.1 |
E-value |
6.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912692|Adiantum capillus-veneris mRNA, clone: YMU001_000021_G08. (420 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative unchara... 50 6e-05 tr|A2WYI5|A2WYI5_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05 tr|A7QP45|A7QP45_VITVI Chromosome chr1 scaffold_136, whole genom... 47 5e-04 tr|Q9SLA7|Q9SLA7_ARATH At2g25560/F13B15.22 (Putative DnaJ protei... 44 0.003 tr|Q1EPG9|Q1EPG9_MUSAC Heat shock protein DnaJ N-terminal domain... 44 0.003 tr|A7PHJ3|A7PHJ3_VITVI Chromosome chr17 scaffold_16, whole genom... 44 0.003 tr|A5AWU3|A5AWU3_VITVI Putative uncharacterized protein OS=Vitis... 44 0.003 tr|Q7XKR2|Q7XKR2_ORYSJ OSJNBa0053B21.9 protein OS=Oryza sativa s... 42 0.020 tr|Q6K2F0|Q6K2F0_ORYSJ Os02g0510000 protein OS=Oryza sativa subs... 42 0.020 tr|Q0JDP0|Q0JDP0_ORYSJ Os04g0388800 protein (Fragment) OS=Oryza ... 42 0.020 tr|Q01LE1|Q01LE1_ORYSA OSIGBa0096P03.4 protein OS=Oryza sativa G... 42 0.020 tr|A9TAD2|A9TAD2_PHYPA Predicted protein OS=Physcomitrella paten... 42 0.020 tr|A3AT90|A3AT90_ORYSJ Putative uncharacterized protein OS=Oryza... 42 0.020 tr|A2XSS7|A2XSS7_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020 tr|A2X592|A2X592_ORYSI Putative uncharacterized protein OS=Oryza... 42 0.020 tr|A7PHJ4|A7PHJ4_VITVI Chromosome chr17 scaffold_16, whole genom... 41 0.026 tr|O04648|O04648_ARATH A_TM021B04.9 protein OS=Arabidopsis thali... 41 0.034 tr|A9RBW3|A9RBW3_PHYPA Predicted protein OS=Physcomitrella paten... 40 0.044 tr|Q9CAW0|Q9CAW0_ARATH Putative uncharacterized protein T9J14.9 ... 40 0.057 tr|A8MR58|A8MR58_ARATH Uncharacterized protein At3g04960.1 (At3g... 40 0.057 tr|A8MQS7|A8MQS7_ARATH Uncharacterized protein At3g04960.2 OS=Ar... 40 0.057 tr|A7QTV7|A7QTV7_VITVI Chromosome undetermined scaffold_171, who... 40 0.057 tr|A7NW98|A7NW98_VITVI Chromosome chr5 scaffold_2, whole genome ... 40 0.075 tr|Q9FGM2|Q9FGM2_ARATH DnaJ protein-like OS=Arabidopsis thaliana... 39 0.098 tr|Q6NMG4|Q6NMG4_ARATH At5g53150 OS=Arabidopsis thaliana PE=2 SV=1 39 0.098 tr|A7QX12|A7QX12_VITVI Chromosome chr14 scaffold_211, whole geno... 39 0.098 tr|A9S6V0|A9S6V0_PHYPA Predicted protein (Fragment) OS=Physcomit... 39 0.13 tr|B4F8T9|B4F8T9_MAIZE Putative uncharacterized protein OS=Zea m... 39 0.17 tr|A7Q327|A7Q327_VITVI Chromosome chr12 scaffold_47, whole genom... 39 0.17 tr|A5B022|A5B022_VITVI Putative uncharacterized protein OS=Vitis... 39 0.17
>tr|Q8RYF9|Q8RYF9_ORYSJ Heat shock protein-like (Putative uncharacterized protein) (Os01g0923800 protein) OS=Oryza sativa subsp. japonica GN=P0592G05.23 PE=4 SV=1 Length = 744
Score = 50.1 bits (118), Expect = 6e-05 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK 307 EM RFSH +P H LT E + KGC+ELDP STP++ Sbjct: 697 EMLRFSHQVPFHVLTGEEAKNSPKGCYELDPGSTPKE 733
>tr|A2WYI5|A2WYI5_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_04986 PE=4 SV=1 Length = 744
Score = 50.1 bits (118), Expect = 6e-05 Identities = 21/37 (56%), Positives = 26/37 (70%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTPRK 307 EM RFSH +P H LT E + KGC+ELDP STP++ Sbjct: 697 EMLRFSHQVPFHVLTGEEAKNSPKGCYELDPGSTPKE 733
>tr|A7QP45|A7QP45_VITVI Chromosome chr1 scaffold_136, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00002795001 PE=4 SV=1 Length = 817
Score = 47.0 bits (110), Expect = 5e-04 Identities = 21/35 (60%), Positives = 24/35 (68%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 EM RFSH +P + LT E P KGC ELDPA+TP Sbjct: 700 EMFRFSHHVPSYLLTGQEAPSAPKGCRELDPAATP 734
>tr|Q9SLA7|Q9SLA7_ARATH At2g25560/F13B15.22 (Putative DnaJ protein) OS=Arabidopsis thaliana GN=At2g25560 PE=2 SV=1 Length = 656
Score = 44.3 bits (103), Expect = 0.003 Identities = 19/36 (52%), Positives = 25/36 (69%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 +E+ RFSH IP + LT E P +GC +LDPA+TP Sbjct: 610 DEISRFSHKIPSYLLTGQEAPGAPRGCRQLDPAATP 645
>tr|Q1EPG9|Q1EPG9_MUSAC Heat shock protein DnaJ N-terminal domain-containing protein OS=Musa acuminata GN=MA4_106O17.46 PE=4 SV=1 Length = 1015
Score = 44.3 bits (103), Expect = 0.003 Identities = 20/36 (55%), Positives = 24/36 (66%) Frame = -1
Query: 420 NEMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 NE+ RFSH IP ++LT E +GC ELDPAS P Sbjct: 678 NEILRFSHNIPSYRLTGTEKESIPRGCLELDPASLP 713
>tr|A7PHJ3|A7PHJ3_VITVI Chromosome chr17 scaffold_16, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00017963001 PE=4 SV=1 Length = 679
Score = 44.3 bits (103), Expect = 0.003 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 E+ RFSH +P + LT E + KGC ELDPA+TP Sbjct: 616 ELFRFSHQVPSYLLTGQEAENAPKGCLELDPAATP 650
>tr|A5AWU3|A5AWU3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001272 PE=4 SV=1 Length = 951
Score = 44.3 bits (103), Expect = 0.003 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 E+ RFSH +P + LT E + KGC ELDPA+TP Sbjct: 823 ELFRFSHQVPSYLLTGQEAENAPKGCLELDPAATP 857
>tr|Q7XKR2|Q7XKR2_ORYSJ OSJNBa0053B21.9 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0053B21.9 PE=4 SV=2 Length = 729
Score = 41.6 bits (96), Expect = 0.020 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 E+ RFSH +P LT E + KGC ELDPA+TP Sbjct: 675 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 709
>tr|Q6K2F0|Q6K2F0_ORYSJ Os02g0510000 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0052M16.36 PE=4 SV=1 Length = 734
Score = 41.6 bits (96), Expect = 0.020 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 E+ RFSH +P LT E + KGC ELDPA+TP Sbjct: 680 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 714
>tr|Q0JDP0|Q0JDP0_ORYSJ Os04g0388800 protein (Fragment) OS=Oryza sativa subsp. japonica GN=Os04g0388800 PE=4 SV=1 Length = 598
Score = 41.6 bits (96), Expect = 0.020 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = -1
Query: 417 EMRRFSHXIPVHQLTAGEVPDCVKGCFELDPASTP 313 E+ RFSH +P LT E + KGC ELDPA+TP Sbjct: 544 ELFRFSHRVPSRLLTGEEGNNAPKGCHELDPAATP 578
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