BP912694
Clone id YMU001_000021_G10
Library
Length 441
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_G10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGTATTCTGCCAACATTGGAAGGGCGAATACAACATGAGAGAGCTTGACTGGGGCTGAGT
GGAGTGGAAAGTATCACAAGGGGCATTGTAGATGCACATTGAGAAAATAATTTCAGTTGT
CTAGTTCAGCACTTGCATTGAATCTTAACAATAATTTTGCATCTTCTGATGAGTATTAAT
GTCGGAGATTGAATCCCTCACATAAAAGAGACAGTTACGTTCACGTGGGAGTTGTTCTCA
CTGCCAGTGCTGTTGCAATCAAACATGATTTCTTCTCTGCCTATCCTAAACCTGAGGAAG
AGGATAATTGGCCAACCCACCTATGTGGGTCTTTCAATGTATTCAAAATTGAAACCTGGG
GATTGTAAAAATAGCCAAATTGGTAAGGCAGCAGTGATGTTGTGATTTCAAGTATTTCCT
GTGTCTGTCTATGAAGGGTTC
■■Homology search results ■■ -
sp_hit_id Q6ATV4
Definition sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membrane-type OS=Oryza sativa subsp. japonica
Align length 32
Score (bit) 30.0
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912694|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G10.
(441 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma membr... 30 4.5
sp|Q27483|K6PF_CAEEL Probable 6-phosphofructokinase OS=Caenorhab... 29 9.8

>sp|Q6ATV4|ACA2_ORYSJ Calcium-transporting ATPase 2, plasma
membrane-type OS=Oryza sativa subsp. japonica
GN=Os03g0616400 PE=2 SV=1
Length = 1033

Score = 30.0 bits (66), Expect = 4.5
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1

Query: 301 RIIGQPTYVGLSMYSKLKPGDCKNSQIGKAAV 396
+I+G PT L ++ L GDCK Q+G V
Sbjct: 526 QILGTPTETALLEFALLLDGDCKEKQLGSKIV 557


>sp|Q27483|K6PF_CAEEL Probable 6-phosphofructokinase
OS=Caenorhabditis elegans GN=C50F4.2 PE=2 SV=1
Length = 756

Score = 28.9 bits (63), Expect = 9.8
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +3

Query: 222 HVGVVLTASAVAIKHDFFSAYPKPEEEDNWPTHLC 326
H G + +A+A++ D+ YP+ ++ WP LC
Sbjct: 204 HCGYLALTAAIAVEADYVF-YPEIPPDEKWPEQLC 237


tr_hit_id B7BBT5
Definition tr|B7BBT5|B7BBT5_9PORP Putative uncharacterized protein OS=Parabacteroides johnsonii DSM 18315
Align length 43
Score (bit) 33.5
E-value 5.4
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912694|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G10.
(441 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B7BBT5|B7BBT5_9PORP Putative uncharacterized protein OS=Parab... 33 5.4
tr|Q2K671|Q2K671_RHIEC Probable sugar ABC transporter, permease ... 33 7.0

>tr|B7BBT5|B7BBT5_9PORP Putative uncharacterized protein
OS=Parabacteroides johnsonii DSM 18315
GN=PRABACTJOHN_02498 PE=4 SV=1
Length = 491

Score = 33.5 bits (75), Expect = 5.4
Identities = 16/43 (37%), Positives = 29/43 (67%)
Frame = +1

Query: 250 LLQSNMISSLPILNLRKRIIGQPTYVGLSMYSKLKPGDCKNSQ 378
+LQ + I LP+++ +KR++G TY ++ +K KP CK+S+
Sbjct: 177 ILQQHKIEKLPVVDSQKRLVGLITYKDITR-AKDKPTACKDSK 218


>tr|Q2K671|Q2K671_RHIEC Probable sugar ABC transporter, permease
protein OS=Rhizobium etli (strain CFN 42 / ATCC 51251)
GN=RHE_CH02897 PE=3 SV=1
Length = 315

Score = 33.1 bits (74), Expect = 7.0
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 5/63 (7%)
Frame = +1

Query: 178 NVGD*IPHIKETVTFTWELFSLPVLLQSNMISSLPI-----LNLRKRIIGQPTYVGLSMY 342
N D +P IK V + +F LP ++ + I LP+ L+L + GQPT+VGL+ +
Sbjct: 6 NAADIVP-IKRPVRWHIFVFMLPAVIVYSAIMVLPLIETLRLSLYNTVDGQPTFVGLANF 64

Query: 343 SKL 351
L
Sbjct: 65 KVL 67