BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912695|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G11.
         (526 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q52081|FLGH_PSEPU Flagellar L-ring protein OS=Pseudomonas put...    31   3.2  
sp|P13604|ADH1_CLOSA NADPH-dependent butanol dehydrogenase OS=Cl...    30   9.1  

>sp|Q52081|FLGH_PSEPU Flagellar L-ring protein OS=Pseudomonas putida
           GN=flgH PE=3 SV=1
          Length = 231

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = +1

Query: 325 CVECPIFNPSSSSTRRCCNLHTAVWRSRT*LS*KPAYAQTC----RRLGWHHGAAISSTN 492
           CV  P  +P++ + RRCC       R  T  S +P  ++TC    RR GW   +   S +
Sbjct: 19  CV-APTPSPTTRTMRRCCRAPRCRQRPTTVRSTRPVSSRTCTATARRSGWVTSSPSRSMS 77

Query: 493 KTRA 504
            T A
Sbjct: 78  ATSA 81


>sp|P13604|ADH1_CLOSA NADPH-dependent butanol dehydrogenase
           OS=Clostridium saccharobutylicum GN=adh1 PE=3 SV=1
          Length = 388

 Score = 29.6 bits (65), Expect = 9.1
 Identities = 12/43 (27%), Positives = 20/43 (46%)
 Frame = -3

Query: 335 HSTQCITGPNL*SINVFVCHILEKDTNCMYH*ESKCICILYLP 207
           H  QC+ G    +  + +CH +   T  ++H    C   +YLP
Sbjct: 240 HYAQCLAGMAFSNALLGICHSMAHKTGAVFHIPHGCANAIYLP 282

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912695|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_G11.
         (526 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9UYU3|A9UYU3_MONBE Predicted protein OS=Monosiga brevicollis...    35   2.3  
tr|B5JIA0|B5JIA0_9BACT CAAX amino terminal protease family OS=Ve...    35   3.0  
tr|B0W1G1|B0W1G1_CULQU Mitogen-activated protein kinase organize...    33   8.8  

>tr|A9UYU3|A9UYU3_MONBE Predicted protein OS=Monosiga brevicollis
           GN=25243 PE=4 SV=1
          Length = 344

 Score = 35.0 bits (79), Expect = 2.3
 Identities = 17/47 (36%), Positives = 26/47 (55%)
 Frame = -1

Query: 487 LKKWQPHGAILISCRFGHTLASSSAMSAISKRQCVSYSNDVSRSYWD 347
           +K W PH  +LI    GH+L  +SA ++    + VS S+D +   WD
Sbjct: 62  IKLWNPHTQLLIKTYKGHSLEVNSAEASRDNSRFVSGSSDKAVMMWD 108


>tr|B5JIA0|B5JIA0_9BACT CAAX amino terminal protease family
           OS=Verrucomicrobiae bacterium DG1235 GN=VDG1235_3243
           PE=4 SV=1
          Length = 262

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)
 Frame = +2

Query: 194 HYLSM--VGIGCICTLIPSGTCSLYLSLKYGIRRH*YFTNLGRLYIV*SAQYLIPVAPRH 367
           H LS   +G+G +     +G C L   L YG   H +F ++G  +    +   I   PRH
Sbjct: 78  HSLSFKWIGLGILAGAALAGLCYLLGILLYGKTEHNWFVSIGYTF---QSDERIAQLPRH 134

Query: 368 VVAVTYTLP 394
           +  + +T+P
Sbjct: 135 IAFIAFTIP 143


>tr|B0W1G1|B0W1G1_CULQU Mitogen-activated protein kinase organizer 1
           OS=Culex quinquefasciatus GN=CpipJ_CPIJ000922 PE=4 SV=1
          Length = 305

 Score = 33.1 bits (74), Expect = 8.8
 Identities = 16/47 (34%), Positives = 20/47 (42%)
 Frame = -1

Query: 487 LKKWQPHGAILISCRFGHTLASSSAMSAISKRQCVSYSNDVSRSYWD 347
           +K W PH  +L+    GH      A  +      VS S D S  YWD
Sbjct: 38  IKLWNPHSGLLLKTYGGHAGEVMDAAGSCDSGFIVSVSQDKSVIYWD 84