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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912701
Clone id YMU001_000021_H05
Library
Length 305
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_H05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
AGGATGATGATCTTGAAGAAGTTATTCTTCTACGTGCCAAGGACTAAAAGGATAGCAGCG
CGTGAGCAGAGGTTAGTTATGGCTTCGCCGCTTACAGCAGACTTAGCATTGAGTCATGAA
GCCGGGACATGGAGGAGCAGACATTGGCTTTGAGATCTTTCAAATGGGAACTACAAGTGT
TCTACTTAGGTCGACCTTTTTGACCACAAAACCGAGTTTGATCTCGGCTCAGAATGAACA
TTGGAGATATGCTGAGCATATGCAAGCTGAATGTTGTTTTCTTCTTATAGAACAGTTTCT
GGATG
■■Homology search results ■■ -
sp_hit_id Q2TGI5
Definition sp|Q2TGI5|ZDH24_RAT Probable palmitoyltransferase ZDHHC24 OS=Rattus norvegicus
Align length 30
Score (bit) 29.6
E-value 4.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912701|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_H05.
         (305 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q2TGI5|ZDH24_RAT Probable palmitoyltransferase ZDHHC24 OS=Rat...    30   4.9  
sp|Q6UX98|ZDH24_HUMAN Probable palmitoyltransferase ZDHHC24 OS=H...    30   4.9  

>sp|Q2TGI5|ZDH24_RAT Probable palmitoyltransferase ZDHHC24 OS=Rattus
           norvegicus GN=Zdhhc24 PE=2 SV=1
          Length = 284

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 PPCPGFMTQC*VCCKRRSHN*PLLTRCYPF 46
           PP  G  + C VC  RR H+  LL RC  F
Sbjct: 104 PPRSGHCSACRVCILRRDHHCRLLGRCVGF 133


>sp|Q6UX98|ZDH24_HUMAN Probable palmitoyltransferase ZDHHC24 OS=Homo
           sapiens GN=ZDHHC24 PE=2 SV=1
          Length = 284

 Score = 29.6 bits (65), Expect = 4.9
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 135 PPCPGFMTQC*VCCKRRSHN*PLLTRCYPF 46
           PP  G  + C VC  RR H+  LL RC  F
Sbjct: 104 PPRSGHCSACRVCILRRDHHCRLLGRCVGF 133
tr_hit_id Q3BKI6
Definition tr|Q3BKI6|Q3BKI6_9PROT Putative uncharacterized protein OS=Magnetospirillum gryphiswaldense
Align length 22
Score (bit) 33.5
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912701|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_H05.
         (305 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q3BKI6|Q3BKI6_9PROT Putative uncharacterized protein OS=Magne...    33   5.5  
tr|Q7Q6M0|Q7Q6M0_ANOGA AGAP005771-PA OS=Anopheles gambiae GN=AGA...    33   5.5  
tr|A9T709|A9T709_PHYPA Predicted protein OS=Physcomitrella paten...    33   7.2  
tr|Q4E173|Q4E173_TRYCR Putative uncharacterized protein OS=Trypa...    33   7.2  
tr|Q4E0G7|Q4E0G7_TRYCR Putative uncharacterized protein OS=Trypa...    33   7.2  

>tr|Q3BKI6|Q3BKI6_9PROT Putative uncharacterized protein
           OS=Magnetospirillum gryphiswaldense GN=mgI380 PE=4 SV=1
          Length = 40

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = -2

Query: 280 KTTFSLHMLSISPMFILSRDQT 215
           KT+F LH+L + P F+LS+DQT
Sbjct: 11  KTSFDLHVLGLPPAFVLSQDQT 32


>tr|Q7Q6M0|Q7Q6M0_ANOGA AGAP005771-PA OS=Anopheles gambiae
            GN=AGAP005771 PE=4 SV=4
          Length = 2437

 Score = 33.5 bits (75), Expect = 5.5
 Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
 Frame = -2

Query: 265  LHMLSISPMFILSRDQTRFCGQKGRPK*NTCSSHLKDLKANVCSSMSRL----HDSML 104
            LH LS+S + + +  QT        P   +C  H +DL +  C ++SRL    HDS++
Sbjct: 2259 LHQLSLSEICVSAISQTECI-----PSLKSCMEHHRDLTSTACETLSRLFKCQHDSLI 2311


>tr|A9T709|A9T709_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_88924 PE=4 SV=1
          Length = 518

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 9/54 (16%)
 Frame = +2

Query: 170 TTSVLLRSTFLTTKPSLISAQN---------EHWRYAEHMQAECCFLLIEQFLD 304
           TTSV++    + T+  +++  N           W Y EHM +  CF  IEQ LD
Sbjct: 176 TTSVVMHPLLMGTEQHIVADVNTGRVPKWFSRAWTYQEHMLSSRCFYAIEQSLD 229


>tr|Q4E173|Q4E173_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053511585.90 PE=4 SV=1
          Length = 1049

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 31  YVPRTKRIAAREQRLVMASPLTA-DLALSHEAGTWRSRHWL*DLSNGNY 174
           Y P+ +     ++R V A P +  D  L  +A  W  RHWL + S+ NY
Sbjct: 681 YQPQQQLQQEEKERKVRAQPFSQHDTGLDGKASAWSRRHWLREHSDWNY 729


>tr|Q4E0G7|Q4E0G7_TRYCR Putative uncharacterized protein
           OS=Trypanosoma cruzi GN=Tc00.1047053510155.90 PE=4 SV=1
          Length = 1049

 Score = 33.1 bits (74), Expect = 7.2
 Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 31  YVPRTKRIAAREQRLVMASPLTA-DLALSHEAGTWRSRHWL*DLSNGNY 174
           Y P+ +     ++R V A P +  D  L  +A  W  RHWL + S+ NY
Sbjct: 681 YQPQQQLQQEEKERKVRAQPFSQHDTGLDGKASAWSRRHWLREHSDWNY 729