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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912704
Clone id YMU001_000021_H10
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000021_H10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTACTGCCAAAGGGGGTTGCACTCGCACATTTGCCGTCAACCCACCAGATCTCGCAATC
CATGTGCCGTTTGCTGTTCTGCTGAGCTGAACATGGCCTCCTGCACCTCGCCCTGCCTAT
ACCACCCTGACTTGTCTAGCGTGCGAAGCCACTACCCGGCCCCACCCTGCAAGAAGAAAA
GGCCGCAGCTATAGGGTCGCGTACAAGATAGACAGAGAGGGCGGGCCTATAACTGTGTCA
ATCTGCATACCAAATGTATTCCACCCACTGATGCACCCCTTCTTCACACACACACACACA
CACACATAGAGAATGCCCTACACGTGCGTGTCAAGTGGCCCTTCTCCATGCAGTGCCTTG
TGAGCTCCATTACACAGTGCAGCTGTAGCTCATCCTCTGTCCCCCATCGGCTGCAAGCAA
TAGCCAAAATGCAAGATCGAAGCCCTGGCAGCGGTTGCCTTCGCTATGCTGGGAGTTGTG
CATTTGCTACCGTTGTGCAGTATCATTGATATCCCCTGTAGTCCTCACGC
■■Homology search results ■■ -
sp_hit_id Q8AVA3
Definition sp|Q8AVA3|CRVP_PSEPO Pseudecin OS=Pseudechis porphyriacus
Align length 66
Score (bit) 37.7
E-value 0.034
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912704|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_H10.
         (530 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8AVA3|CRVP_PSEPO Pseudecin OS=Pseudechis porphyriacus PE=1 SV=1    38   0.034
sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin OS=Pseudechis australis PE=1...    35   0.29 
sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2        34   0.38 
sp|Q8UW25|CRVP1_LAPHA Cysteine-rich venom protein 1 OS=Lapemis h...    32   1.4  
sp|Q969S8|HDA10_HUMAN Histone deacetylase 10 OS=Homo sapiens GN=...    32   1.9  
sp|Q6DRA6|H2B2D_HUMAN Putative histone H2B type 2-D OS=Homo sapi...    32   1.9  
sp|Q6DN03|H2B2C_HUMAN Putative histone H2B type 2-C OS=Homo sapi...    32   1.9  
sp|Q7ZZN8|CRVP2_NAJAT Natrin-2 OS=Naja atra PE=1 SV=1                  32   1.9  
sp|P0C314|CLPP_ORYSJ ATP-dependent Clp protease proteolytic subu...    32   1.9  
sp|P0C313|CLPP_ORYSI ATP-dependent Clp protease proteolytic subu...    32   1.9  
sp|P0C312|CLPP_ORYSA ATP-dependent Clp protease proteolytic subu...    32   1.9  
sp|Q6ENE9|CLPP_ORYNI ATP-dependent Clp protease proteolytic subu...    32   1.9  
sp|Q9XSD3|CRIS1_MACMU Cysteine-rich secretory protein 1 OS=Macac...    32   2.5  
sp|P54107|CRIS1_HUMAN Cysteine-rich secretory protein 1 OS=Homo ...    32   2.5  
sp|A1E9U9|CLPP_SORBI ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|Q6ENT9|CLPP_SACOF ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|Q6L377|CLPP_SACHY ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|P26567|CLPP_MAIZE ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|P48883|CLPP_HORVU ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|A1EA33|CLPP_AGRST ATP-dependent Clp protease proteolytic subu...    32   2.5  
sp|Q86HT1|PSIL_DICDI Protein psiL OS=Dictyostelium discoideum GN...    31   3.2  
sp|P24064|CLPP_WHEAT ATP-dependent Clp protease proteolytic subu...    31   3.2  
sp|O74957|AGO1_SCHPO Protein argonaute OS=Schizosaccharomyces po...    26   4.6  
sp|Q9BYQ5|KRA46_HUMAN Keratin-associated protein 4-6 OS=Homo sap...    30   5.5  
sp|P19560|POL_BIV29 Gag-Pol polyprotein OS=Bovine immunodeficien...    30   7.2  
sp|Q9BYR0|KRA47_HUMAN Keratin-associated protein 4-7 OS=Homo sap...    30   7.2  
sp|Q8JI38|CRVP_LATSE Latisemin OS=Laticauda semifasciata PE=2 SV=1     30   7.2  

>sp|Q8AVA3|CRVP_PSEPO Pseudecin OS=Pseudechis porphyriacus PE=1 SV=1
          Length = 238

 Score = 37.7 bits (86), Expect = 0.034
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPC---- 170
           YC  G        P +S  PCA C SA +N   CT+PC Y+ D S+ +S      C    
Sbjct: 164 YCPAGNIRGSIATPYKSGPPCADCPSACVNRL-CTNPCNYNNDFSNCKSLAKKSKCQTEW 222

Query: 171 -KKKRP 185
            KKK P
Sbjct: 223 IKKKCP 228


>sp|Q8AVA4|CRVP_PSEAU Pseudechetoxin OS=Pseudechis australis PE=1
           SV=1
          Length = 238

 Score = 34.7 bits (78), Expect = 0.29
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPC---- 170
           YC  G        P +S  PCA C SA +N   CT+PC  + D S+ +S      C    
Sbjct: 164 YCPAGNIRGSIATPYKSGPPCADCPSACVNKL-CTNPCKRNNDFSNCKSLAKKSKCQTEW 222

Query: 171 -KKKRP 185
            KKK P
Sbjct: 223 IKKKCP 228


>sp|P06868|PLMN_BOVIN Plasminogen OS=Bos taurus GN=PLG PE=1 SV=2
          Length = 812

 Score = 34.3 bits (77), Expect = 0.38
 Identities = 17/59 (28%), Positives = 25/59 (42%)
 Frame = +3

Query: 12  RGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPCKKKRPQ 188
           + L  + CR P   + P     ++E+    CT P      LS+ R   P PP +   PQ
Sbjct: 324 KNLEENYCRNPNGEKAPWCYTTNSEVRWEYCTIPSCESSPLSTERMDVPVPPEQTPVPQ 382


>sp|Q8UW25|CRVP1_LAPHA Cysteine-rich venom protein 1 OS=Lapemis
           hardwickii PE=2 SV=2
          Length = 238

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 19/57 (33%), Positives = 25/57 (43%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPCK 173
           YC  G  S     P +S   C  C SA +N   CT+PC Y    S+ ++      CK
Sbjct: 164 YCPAGNISSSIATPYKSGPSCGDCPSACVN-GLCTNPCEYEDTFSNCKALAKKTKCK 219


>sp|Q969S8|HDA10_HUMAN Histone deacetylase 10 OS=Homo sapiens
           GN=HDAC10 PE=1 SV=1
          Length = 669

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +3

Query: 117 LYHPDLSSVRSHYPAPPCKKKRPQL*GRVQD--RQRGRAYNCVNLHTKCIPPTDAPLLHT 290
           +YH D+++ R  +  P C+ +RP+      D  RQRG    C+ L  +     +  L+H+
Sbjct: 6   VYHEDMTATRLLWDDPECEIERPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHS 65


>sp|Q6DRA6|H2B2D_HUMAN Putative histone H2B type 2-D OS=Homo sapiens
           GN=HIST2H2BD PE=5 SV=3
          Length = 164

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/52 (32%), Positives = 19/52 (36%)
 Frame = +3

Query: 48  RSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPCKKKRPQL*GRV 203
           RSR PCA CC A      C       P   +     P P  +   P L  RV
Sbjct: 94  RSRRPCACCCPASWPSTPCPRAPRRSPSTPAPSESLPGPGARSLPPSLPPRV 145


>sp|Q6DN03|H2B2C_HUMAN Putative histone H2B type 2-C OS=Homo sapiens
           GN=HIST2H2BC PE=5 SV=3
          Length = 193

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/52 (32%), Positives = 19/52 (36%)
 Frame = +3

Query: 48  RSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPCKKKRPQL*GRV 203
           RSR PCA CC A      C       P   +     P P  +   P L  RV
Sbjct: 94  RSRRPCACCCPASWPSTPCPRAPRRSPSTPAPSESLPGPGARSLPPSLPPRV 145


>sp|Q7ZZN8|CRVP2_NAJAT Natrin-2 OS=Naja atra PE=1 SV=1
          Length = 238

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRS 149
           YC  G        P +S  PC  C SA +N   CT+PC +H   S+ +S
Sbjct: 164 YCPTGNIIGSIATPYKSGPPCGDCPSACVN-GLCTNPCKHHNVFSNCQS 211


>sp|P0C314|CLPP_ORYSJ ATP-dependent Clp protease proteolytic subunit
           OS=Oryza sativa subsp. japonica GN=clpP PE=3 SV=1
          Length = 216

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -2

Query: 148 LRTLDKSGWYRQGEVQEAMFSSAEQQTAHGLRDLVG*RQM---CECNPLW 8
           LRT  K  W    +++  +F SA++  A+GL D+VG   +   C+ +P+W
Sbjct: 160 LRT-GKPFWVVSEDMERDVFMSADEAKAYGLVDIVGDEMLDEHCDTDPVW 208


>sp|P0C313|CLPP_ORYSI ATP-dependent Clp protease proteolytic subunit
           OS=Oryza sativa subsp. indica GN=clpP PE=3 SV=1
          Length = 216

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = -2

Query: 148 LRTLDKSGWYRQGEVQEAMFSSAEQQTAHGLRDLVG*RQM---CECNPLW 8
           LRT  K  W    +++  +F SA++  A+GL D+VG   +   C+ +P+W
Sbjct: 160 LRT-GKPFWVVSEDMERDVFMSADEAKAYGLVDIVGDEMLDEHCDTDPVW 208
tr_hit_id B2ZGN1
Definition tr|B2ZGN1|B2ZGN1_PIG Cysteine-rich secretory protein 1 OS=Sus scrofa
Align length 59
Score (bit) 38.1
E-value 0.28
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912704|Adiantum capillus-veneris mRNA, clone:
YMU001_000021_H10.
         (530 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B2ZGN1|B2ZGN1_PIG Cysteine-rich secretory protein 1 OS=Sus sc...    38   0.28 
tr|Q4T342|Q4T342_TETNG Guanylate cyclase (Fragment) OS=Tetraodon...    34   4.0  
tr|Q3SB03|Q3SB03_HOPST Pseudechetoxin-like protein OS=Hoplocepha...    34   5.3  
tr|B5G6G3|B5G6G3_RHING Cysteine-rich secretory protein OS=Rhinop...    34   5.3  
tr|Q21KB8|Q21KB8_SACD2 Putative sigma 54 modulation protein/ribo...    34   5.3  
tr|B4M632|B4M632_DROVI GJ10693 OS=Drosophila virilis GN=GJ10693 ...    34   5.3  
tr|Q4T1C0|Q4T1C0_TETNG Chromosome undetermined SCAF10675, whole ...    27   6.5  
tr|Q9D259|Q9D259_MOUSE Cysteine-rich secretory protein OS=Mus mu...    33   9.0  

>tr|B2ZGN1|B2ZGN1_PIG Cysteine-rich secretory protein 1 OS=Sus
           scrofa PE=2 SV=1
          Length = 249

 Score = 38.1 bits (87), Expect = 0.28
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVC---CSAELNMASCTSPCLYHPDLSSVRSHYPAPPC 170
           YC  G   +   +P R   PC  C   C  +L    CT+PCLY+ + S+ ++    P C
Sbjct: 175 YCHEGNDPNKKNEPYRRGTPCGDCPDYCEDKL----CTNPCLYYDEYSNCKAQTRGPGC 229


>tr|Q4T342|Q4T342_TETNG Guanylate cyclase (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00008016001 PE=3 SV=1
          Length = 2022

 Score = 34.3 bits (77), Expect = 4.0
 Identities = 17/33 (51%), Positives = 20/33 (60%)
 Frame = -2

Query: 343 KGHLTRTCRAFSMCVCVCV*RRGASVGGIHLVC 245
           K  L  T  AFS+CVCVCV   G   GG+ +VC
Sbjct: 36  KPSLPPTGHAFSLCVCVCV-CGGGGAGGLQVVC 67


>tr|Q3SB03|Q3SB03_HOPST Pseudechetoxin-like protein OS=Hoplocephalus
           stephensii PE=2 SV=1
          Length = 238

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRS 149
           YC  G        P +S  PCA C SA +N   CT+PC +  D S+ ++
Sbjct: 164 YCPAGNIRGSIATPYKSGPPCADCPSACVN-GLCTNPCKHEDDFSNCKA 211


>tr|B5G6G3|B5G6G3_RHING Cysteine-rich secretory protein
           OS=Rhinoplocephalus nigrescens PE=2 SV=1
          Length = 238

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 19/57 (33%), Positives = 26/57 (45%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSSVRSHYPAPPCK 173
           YC  G        P +S   C  C SA +N   CT+PC Y+ D S+ ++      CK
Sbjct: 164 YCPAGNIKGSIATPYKSGPACGDCPSACVN-GLCTNPCKYNDDFSNCKALAKKSKCK 219


>tr|Q21KB8|Q21KB8_SACD2 Putative sigma 54 modulation
           protein/ribosomal protein S30EA OS=Saccharophagus
           degradans (strain 2-40 / ATCC 43961 / DSM 17024)
           GN=Sde_1599 PE=4 SV=1
          Length = 105

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 15/33 (45%), Positives = 21/33 (63%)
 Frame = +1

Query: 160 PHPARRKGRSYRVAYKIDREGGPITVSICIPNV 258
           PH  + KG+ YR + +I  +G P+TVS   PNV
Sbjct: 46  PHNQKHKGKLYRASIEIGLKGHPLTVSQDAPNV 78


>tr|B4M632|B4M632_DROVI GJ10693 OS=Drosophila virilis GN=GJ10693
           PE=4 SV=1
          Length = 1539

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 18/37 (48%), Positives = 22/37 (59%)
 Frame = -3

Query: 201 RDPIAAAFSSCRVGPGSGFAR*TSQGGIGRARCRRPC 91
           R+P   A S+CR+   SGFAR  +Q G    RCR PC
Sbjct: 120 REPAHCAASACRMFCPSGFAR-DAQTGCSVCRCRDPC 155


>tr|Q4T1C0|Q4T1C0_TETNG Chromosome undetermined SCAF10675, whole
           genome shotgun sequence. (Fragment) OS=Tetraodon
           nigroviridis GN=GSTENG00008899001 PE=4 SV=1
          Length = 1229

 Score = 26.9 bits (58), Expect(2) = 6.5
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 285 HTHTHTHIENALHVRVKWP 341
           HTHTHTH    +H ++  P
Sbjct: 715 HTHTHTHTHTHMHAQLTPP 733



 Score = 25.4 bits (54), Expect(2) = 6.5
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 273 APLLHTHTHTH 305
           AP  HTHTHTH
Sbjct: 713 APHTHTHTHTH 723


>tr|Q9D259|Q9D259_MOUSE Cysteine-rich secretory protein OS=Mus
           musculus GN=Crisp4 PE=2 SV=1
          Length = 250

 Score = 33.1 bits (74), Expect = 9.0
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = +3

Query: 3   YCQRGLHSHICRQPTRSRNPCAVCCSAELNMASCTSPCLYHPDLSS 140
           YC  G H      P +  +PC  C +       CT+PC+Y+ + ++
Sbjct: 176 YCHEGNHQDTLNMPYKEGSPCDDCPN-NCEDGLCTNPCIYYDEYNN 220