BP912706 |
Clone id |
YMU001_000022_A01 |
Library |
YMU01 |
Length |
500 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000022_A01. |
Accession |
BP912706 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CATACTACGACAAAAAGCAAGGTCCAATACACAAGTCTATTGAAGCGCTGGATCGAAATG ATATGAGTATTATAGAGTCTGGTAACCCAGATGCGTTCAAAGAATATCTTTTGGAATATG ACAACACAATATGTGGTCGACATCCCATTGCAGTTTTTATGCATATGGCGAAGAATTGTA CAACAAACATGAAAATAAAGTTTCTGCGGTATGAGCAATCCAGCCATTGTAAGAGCACAC GTGATAGCAGTGTCAGCTATGCATCTGCTGTGGTCACAGTGGAAGAATGATGTGCAGCAT TTAACACATTAAAGCATTAGAAAACAAGTTTATATTTTGTACAATTGAAAATTGGCTCAA GCCCTGCAGACCAAATATTGGGACTCGTTGGTTCGATTCATGATCCTGCTTGCCAAATTA TTTAAATTCTCCGGTAATGCAGACTTATACAATGTGTAATGATTTTGGTCGAAAATAGAG TTCATGTTAACATGCTAAAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6GNT9 |
Definition |
sp|Q6GNT9|MEMO1_XENLA Protein MEMO1 OS=Xenopus laevis |
Align length |
84 |
Score (bit) |
85.5 |
E-value |
1.0e-16 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912706|Adiantum capillus-veneris mRNA, clone: YMU001_000022_A01. (500 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6GNT9|MEMO1_XENLA Protein MEMO1 OS=Xenopus laevis GN=memo1 P... 86 1e-16 sp|Q91VH6|MEMO1_MOUSE Protein MEMO1 OS=Mus musculus GN=Memo1 PE=... 85 2e-16 sp|Q4QQR9|MEMO1_RAT Protein MEMO1 OS=Rattus norvegicus GN=Memo1 ... 84 3e-16 sp|Q6DJ03|MEMO1_XENTR Protein MEMO1 OS=Xenopus tropicalis GN=mem... 84 4e-16 sp|Q4R6D9|MEMO1_MACFA Protein MEMO1 OS=Macaca fascicularis GN=ME... 84 5e-16 sp|Q9Y316|MEMO1_HUMAN Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=... 84 5e-16 sp|Q803S3|MEMO1_DANRE Protein MEMO1 OS=Danio rerio GN=memo1 PE=2... 81 3e-15 sp|Q54NZ1|MEMO1_DICDI Protein MEMO1 homolog OS=Dictyostelium dis... 77 3e-14 sp|Q2HJH7|MEMO1_BOVIN Protein MEMO1 OS=Bos taurus GN=MEMO1 PE=2 ... 72 1e-12 sp|Q10212|YAY4_SCHPO UPF0103 protein C4H3.04c OS=Schizosaccharom... 63 7e-10 sp|Q22915|TG253_CAEEL UPF0103 protein tag-253 OS=Caenorhabditis ... 60 6e-09 sp|P47085|YJX8_YEAST UPF0103 protein YJR008W OS=Saccharomyces ce... 46 1e-04 sp|Q9P0X4|CAC1I_HUMAN Voltage-dependent T-type calcium channel s... 33 0.57 sp|A8AB69|Y992_IGNH4 UPF0103 protein Igni_0992 OS=Ignicoccus hos... 32 1.6 sp|A5UN65|Y1438_METS3 UPF0103 protein Msm_1438 OS=Methanobreviba... 30 4.8 sp|Q4QXU2|MRGX2_PYGBI Mas-related G-protein coupled receptor mem... 30 8.2 sp|Q7TN45|MRGB4_RAT Mas-related G-protein coupled receptor membe... 30 8.2
>sp|Q6GNT9|MEMO1_XENLA Protein MEMO1 OS=Xenopus laevis GN=memo1 PE=2 SV=1 Length = 297
Score = 85.5 bits (210), Expect = 1e-16 Identities = 43/84 (51%), Positives = 53/84 (63%), Gaps = 3/84 (3%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAKNCT 182 YYD+ QG I++SIE LD+ MSIIE +P F YL +Y NTICGRHPI V ++ A Sbjct: 201 YYDESQGEIYRSIENLDKMGMSIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQ 260
Query: 183 ---TNMKIKFLRYEQSSHCKSTRD 245 NM FL Y QSS C+S +D Sbjct: 261 KNGVNMSFSFLNYAQSSQCRSWQD 284
>sp|Q91VH6|MEMO1_MOUSE Protein MEMO1 OS=Mus musculus GN=Memo1 PE=1 SV=1 Length = 297
Score = 84.7 bits (208), Expect = 2e-16 Identities = 44/85 (51%), Positives = 56/85 (65%), Gaps = 4/85 (4%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMH----MA 170 YYD+ QG I++SIE LD+ MSIIE +P +F YL +Y NTICGRHPI V ++ + Sbjct: 201 YYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQ 260
Query: 171 KNCTTNMKIKFLRYEQSSHCKSTRD 245 KN NM FL Y QSS C+S +D Sbjct: 261 KN-GMNMSFSFLNYAQSSQCRSWQD 284
>sp|Q4QQR9|MEMO1_RAT Protein MEMO1 OS=Rattus norvegicus GN=Memo1 PE=2 SV=1 Length = 297
Score = 84.3 bits (207), Expect = 3e-16 Identities = 42/84 (50%), Positives = 54/84 (64%), Gaps = 3/84 (3%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHM---AK 173 YYD+ QG I++SIE LD+ MSIIE +P +F YL +Y NTICGRHPI V ++ + Sbjct: 201 YYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQ 260
Query: 174 NCTTNMKIKFLRYEQSSHCKSTRD 245 NM FL Y QSS C+S +D Sbjct: 261 KSGMNMSFSFLNYAQSSQCRSWQD 284
>sp|Q6DJ03|MEMO1_XENTR Protein MEMO1 OS=Xenopus tropicalis GN=memo1 PE=2 SV=1 Length = 297
Score = 84.0 bits (206), Expect = 4e-16 Identities = 42/84 (50%), Positives = 52/84 (61%), Gaps = 3/84 (3%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAKNCT 182 YYD+ QG I++SIE LD+ M IIE +P F YL +Y NTICGRHPI V ++ A Sbjct: 201 YYDESQGEIYRSIENLDKMGMGIIEQLDPVQFSNYLKKYHNTICGRHPIGVLLNAATELQ 260
Query: 183 ---TNMKIKFLRYEQSSHCKSTRD 245 NM FL Y QSS C+S +D Sbjct: 261 KNGVNMSFSFLNYAQSSQCRSWQD 284
>sp|Q4R6D9|MEMO1_MACFA Protein MEMO1 OS=Macaca fascicularis GN=MEMO1 PE=2 SV=1 Length = 297
Score = 83.6 bits (205), Expect = 5e-16 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 4/85 (4%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMH----MA 170 YYD+ QG I++SIE LD+ MSIIE +P +F YL +Y NTICGRHPI V ++ + Sbjct: 201 YYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQ 260
Query: 171 KNCTTNMKIKFLRYEQSSHCKSTRD 245 KN NM FL Y QSS C++ +D Sbjct: 261 KN-GMNMSFSFLNYAQSSQCRNWQD 284
>sp|Q9Y316|MEMO1_HUMAN Protein MEMO1 OS=Homo sapiens GN=MEMO1 PE=1 SV=1 Length = 297
Score = 83.6 bits (205), Expect = 5e-16 Identities = 43/85 (50%), Positives = 56/85 (65%), Gaps = 4/85 (4%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMH----MA 170 YYD+ QG I++SIE LD+ MSIIE +P +F YL +Y NTICGRHPI V ++ + Sbjct: 201 YYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQ 260
Query: 171 KNCTTNMKIKFLRYEQSSHCKSTRD 245 KN NM FL Y QSS C++ +D Sbjct: 261 KN-GMNMSFSFLNYAQSSQCRNWQD 284
>sp|Q803S3|MEMO1_DANRE Protein MEMO1 OS=Danio rerio GN=memo1 PE=2 SV=1 Length = 297
Score = 80.9 bits (198), Expect = 3e-15 Identities = 40/84 (47%), Positives = 51/84 (60%), Gaps = 3/84 (3%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAKNCT 182 YYD+ QG I++SIE LD+ M IIE +P +F YL +Y NTICGRHPI V ++ Sbjct: 201 YYDESQGEIYRSIEHLDKMGMGIIEQLDPISFSNYLKKYHNTICGRHPIGVLLNAVAELK 260
Query: 183 TN---MKIKFLRYEQSSHCKSTRD 245 N M FL Y QSS C++ D Sbjct: 261 KNGIDMNFSFLNYAQSSQCRNWSD 284
>sp|Q54NZ1|MEMO1_DICDI Protein MEMO1 homolog OS=Dictyostelium discoideum GN=memo1 PE=3 SV=1 Length = 290
Score = 77.4 bits (189), Expect = 3e-14 Identities = 41/80 (51%), Positives = 49/80 (61%) Frame = +3
Query: 6 YDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAKNCTT 185 Y+ K+ PI+K IE LDR M IIESG+P F +YL E NTICGR PIAV + + KN Sbjct: 197 YENKEVPIYKYIEELDRKGMEIIESGDPVQFSKYLKETKNTICGRCPIAVMLWITKNSQF 256
Query: 186 NMKIKFLRYEQSSHCKSTRD 245 I L YEQSS + D Sbjct: 257 KYNISSLYYEQSSKVIKSSD 276
>sp|Q2HJH7|MEMO1_BOVIN Protein MEMO1 OS=Bos taurus GN=MEMO1 PE=2 SV=1 Length = 285
Score = 72.4 bits (176), Expect = 1e-12 Identities = 36/75 (48%), Positives = 49/75 (65%), Gaps = 1/75 (1%) Frame = +3
Query: 3 YYDKKQGPIHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAKNCT 182 YYD+ QG I++SIE LD+ MSIIE +P +F YL +Y NTICGRHPI V ++ Sbjct: 201 YYDESQGEIYRSIEHLDKMGMSIIEQLDPVSFSNYLKKYHNTICGRHPIGVLLNAITELQ 260
Query: 183 TN-MKIKFLRYEQSS 224 N M + F ++Q+S Sbjct: 261 KNGMNMSFSFFQQAS 275
>sp|Q10212|YAY4_SCHPO UPF0103 protein C4H3.04c OS=Schizosaccharomyces pombe GN=SPAC4H3.04c PE=2 SV=1 Length = 309
Score = 63.2 bits (152), Expect = 7e-10 Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%) Frame = +3
Query: 6 YDKKQGP----IHKSIEALDRNDMSIIESGNPDAFKEYLLEYDNTICGRHPIAVFMHMAK 173 Y ++ GP I++SI LD M IIE+ + D F EYL NTICGR+PI + M + Sbjct: 216 YKRRGGPTSPKIYESISNLDHIGMKIIETKSSDDFSEYLKTTQNTICGRYPIELIMKSME 275
Query: 174 NCTTNMKIKFLRYEQSSHCKSTRD 245 + + KF+ Y QSSH + D Sbjct: 276 CANFSERFKFISYAQSSHVELVTD 299
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9PB32 |
Definition |
tr|A9PB32|A9PB32_POPTR Putative uncharacterized protein OS=Populus trichocarpa |
Align length |
81 |
Score (bit) |
135.0 |
E-value |
1.0e-30 |
Report |
|