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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912720
Clone id YMU001_000022_B04
Library
Length 563
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_B04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AGCTAGACGGAAATTTTCAAAGTAGTGTGAGCAAGTATGATAGATGGATGCCCCGATGGA
TGGGCGGGCGGAATCCCGGTCTGCGTCCTCTCCGGCTCTGCCCAGCAGGACAACACCAAT
GTTTGTGCATCAGCTAGAGCTGCTGGTAAAGATGGAACTTTAGTGAAAGAGAGAGACTAC
ATCAGCCTCGGGCTGACGGGCGCAGCACCAGAACAAATGCTTACAAGTTCCATCCCTTCT
GGTGTTGATAAAATGGAGTGTGATAATGTGGTGCTAAGCCTTGGCTTAGGCCCCCCTGCA
GATAAAGCAGCAGCTGCTTCCCAAGAGCAGAACACCGGCATTGTTGACCAGCAAATTAGG
CTCAAGGTCACTATGACTAGCGCAAAACCGCAGCACTTTTGGCATGAGAGCTTCCGCGTG
AGCCTCAGCAATGATCAATATCATCAGCACATGGTTAACTGGCAGCCGCAAGCAGAAGCC
TTGAGTCAAGGTGCACCAAGCTTTGGAAAGGGTCACACATCTAGCGTACCTGTCTGGAGC
ACGCCGGTGACCGGGCGACTCAC
■■Homology search results ■■ -
sp_hit_id O80580
Definition sp|O80580|MLO15_ARATH MLO-like protein 15 OS=Arabidopsis thaliana
Align length 42
Score (bit) 30.8
E-value 4.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912720|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_B04.
         (563 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80580|MLO15_ARATH MLO-like protein 15 OS=Arabidopsis thalian...    31   4.8  
sp|P55200|HRX_MOUSE Histone-lysine N-methyltransferase HRX OS=Mu...    30   6.3  
sp|Q1RJQ6|Y327_RICBR Uncharacterized protein RBE_0327 OS=Rickett...    30   8.2  

>sp|O80580|MLO15_ARATH MLO-like protein 15 OS=Arabidopsis thaliana
           GN=MLO15 PE=2 SV=1
          Length = 496

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +1

Query: 409 SFRVSLSNDQYHQHMVNWQPQAE-ALSQGAPSFGKGHTSSVP 531
           SF+ ++ N+Q  +H+V W   A+  + +GA   G  H ++ P
Sbjct: 424 SFKGAIFNEQTQEHLVGWAKMAKRGVKKGATQVGTSHDATSP 465


>sp|P55200|HRX_MOUSE Histone-lysine N-methyltransferase HRX OS=Mus
            musculus GN=Mll PE=2 SV=2
          Length = 3966

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 27/104 (25%), Positives = 41/104 (39%), Gaps = 1/104 (0%)
 Frame = +1

Query: 31   ASMIDGCPDGWAGGIPVCVLSGSAQQDNTNVCASARAAGKDGTLVKERDYISLGLTGAAP 210
            AS I   P     G+      G A++       +   AGK GTL  +RD       G  P
Sbjct: 3420 ASSICVLPSSQTAGMTAASPPGEAEEHYKLQRGNQLLAGKTGTLTSQRDRDPDSAPGTQP 3479

Query: 211  EQML-TSSIPSGVDKMECDNVVLSLGLGPPADKAAAASQEQNTG 339
                 T+  P+GV ++E +  + S      A   ++ S  Q +G
Sbjct: 3480 SNFTQTAEAPNGV-RLEQNKTLPSAKPASSASPGSSPSSGQQSG 3522


>sp|Q1RJQ6|Y327_RICBR Uncharacterized protein RBE_0327 OS=Rickettsia
           bellii (strain RML369-C) GN=RBE_0327 PE=4 SV=1
          Length = 328

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
 Frame = +1

Query: 211 EQMLTSSIPSGVDKMECDNVVLSLGLGPPADKAA----AASQEQNTGIVDQQIRLKVTMT 378
           E   T +I SG   +  DNV++ + +G   +       AAS   N    D   R+ V + 
Sbjct: 147 EDTKTFTIGSGAVMLGLDNVIVGMNVGQAREAIIPAKYAASVGANNDNADSAYRVNVMLK 206

Query: 379 SAKPQHF 399
           S  PQ+F
Sbjct: 207 SILPQNF 213
tr_hit_id A8J5T5
Definition tr|A8J5T5|A8J5T5_CHLRE COP-II coat subunit OS=Chlamydomonas reinhardtii
Align length 104
Score (bit) 38.9
E-value 0.19
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912720|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_B04.
         (563 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A8J5T5|A8J5T5_CHLRE COP-II coat subunit OS=Chlamydomonas rein...    39   0.19 
tr|A6SWV7|A6SWV7_JANMA Multidrug efflux system transmembrane pro...    37   0.97 
tr|Q39TW1|Q39TW1_GEOMG 4Fe-4S ferredoxin, iron-sulfur binding pr...    35   2.2  
tr|A1R9P9|A1R9P9_ARTAT Nitrite reductase [NAD(P)H], large subuni...    35   2.2  
tr|B1J457|B1J457_PSEPW FAD-dependent pyridine nucleotide-disulph...    35   3.7  
tr|Q1I2R6|Q1I2R6_PSEE4 Rubredoxin-NAD(+) reductase OS=Pseudomona...    34   4.8  
tr|B5E7S9|B5E7S9_GEOBB 4Fe-4S ferredoxin iron-sulfur binding dom...    34   4.8  
tr|Q0YNI7|Q0YNI7_9DELT 4Fe-4S ferredoxin, iron-sulfur binding OS...    34   4.8  
tr|A8IM86|A8IM86_OECSM Silk fibroin OS=Oecophylla smaragdina GN=...    34   4.8  
tr|B3JSZ6|B3JSZ6_9DELT 4Fe-4S ferredoxin iron-sulfur binding dom...    34   6.3  
tr|A3UL25|A3UL25_VIBSP Cysteine synthase OS=Vibrio splendidus 12...    34   6.3  
tr|Q88C69|Q88C69_PSEPK Rubredoxin reductase OS=Pseudomonas putid...    33   8.2  
tr|Q48BQ8|Q48BQ8_PSE14 Rubredoxin reductase OS=Pseudomonas syrin...    33   8.2  
tr|A5WB31|A5WB31_PSEP1 FAD-dependent pyridine nucleotide-disulph...    33   8.2  
tr|A9NLW4|A9NLW4_PICSI Putative uncharacterized protein OS=Picea...    33   8.2  
tr|Q4Q0B5|Q4Q0B5_LEIMA Protein transport protein sec23-like prot...    33   8.2  
tr|Q5BBX6|Q5BBX6_EMENI Putative uncharacterized protein OS=Emeri...    33   8.2  

>tr|A8J5T5|A8J5T5_CHLRE COP-II coat subunit OS=Chlamydomonas
           reinhardtii GN=SEC31 PE=4 SV=1
          Length = 1313

 Score = 38.9 bits (89), Expect = 0.19
 Identities = 35/104 (33%), Positives = 43/104 (41%), Gaps = 16/104 (15%)
 Frame = +1

Query: 97  SAQQDNTNVCASARAAGKDGTLVKERDYISL---------GLTGAAPEQMLTSSIPSGVD 249
           SA    T     A AAG D   ++  D +           G   A+P Q+L    P   D
Sbjct: 508 SAAGGPTENGVDAAAAGMDQLNLQNADGVPRLEVPGASVGGAVAASPHQLLAQDDPDFFD 567

Query: 250 KMECDNVVLSLGLGPPADKAAAAS-------QEQNTGIVDQQIR 360
           K+E   VVL  GL P AD AAAA+       Q  N G +D   R
Sbjct: 568 KLEDTEVVLG-GLAPDADVAAAAAGPDLGGVQPLNAGAMDAMAR 610


>tr|A6SWV7|A6SWV7_JANMA Multidrug efflux system transmembrane
           protein OS=Janthinobacterium sp. (strain Marseille)
           (Minibacterium massiliensis) GN=mma_1064 PE=4 SV=1
          Length = 570

 Score = 36.6 bits (83), Expect = 0.97
 Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
 Frame = +1

Query: 91  SGSAQQDNTNV--CASARAAGKDGTLVKERDYISLGLTGAAPEQMLTSSIPSGVDKMECD 264
           SG A+Q  T      + +  GKDG +  E+  + LG+T     Q+L     SG++  E D
Sbjct: 483 SGFAEQSTTRTPRTGTVKVIGKDGNI--EQRKVELGVTNRVQMQVL-----SGLE--EGD 533

Query: 265 NVVLSLGLGPPADKAAAASQEQ 330
            VVL + L P   + AAA+ +Q
Sbjct: 534 TVVLGMKLPPSTKRPAAATNQQ 555


>tr|Q39TW1|Q39TW1_GEOMG 4Fe-4S ferredoxin, iron-sulfur binding
           protein OS=Geobacter metallireducens (strain GS-15 /
           ATCC 53774 / DSM 7210) GN=Gmet_2084 PE=4 SV=1
          Length = 1014

 Score = 35.4 bits (80), Expect = 2.2
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 172 RDYISLGLTGAAPEQMLT--SSIPSGVDKMECDNVVLSLGLGPPADKAAAASQ 324
           R Y+++G    + + +    S++  GV + E D VVLS+GL PP D  A AS+
Sbjct: 325 RSYVTIGREIESTKNVTIRYSTVDDGVKEEEFDMVVLSVGLNPPKDVEALASK 377


>tr|A1R9P9|A1R9P9_ARTAT Nitrite reductase [NAD(P)H], large subunit
           OS=Arthrobacter aurescens (strain TC1) GN=AAur_3265 PE=4
           SV=1
          Length = 826

 Score = 35.4 bits (80), Expect = 2.2
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 9/109 (8%)
 Frame = +1

Query: 64  AGGIPVCVLSGSAQQDNTNVCASARAAGKDGTLVKERDYISLGL---TGAAPEQMLTSSI 234
           A G+ V V+       N  +       G DG  +  R   +LG+   TG+    +L S  
Sbjct: 178 ANGLDVAVVHSGGHLMNAQL-------GPDGGAILRRSVEALGIEVHTGSRTTAILGSDQ 230

Query: 235 PSGV-----DKMECDNVVLSLGLGPPADKAAAASQEQNTGI-VDQQIRL 363
            SGV      +++C+ VV++ G+ P  D A  +      GI VD Q+R+
Sbjct: 231 LSGVRLRDDTEIDCNMVVVTAGIRPNVDVAVVSGLAVERGIVVDDQLRV 279


>tr|B1J457|B1J457_PSEPW FAD-dependent pyridine nucleotide-disulphide
           oxidoreductase OS=Pseudomonas putida (strain W619)
           GN=PputW619_0159 PE=4 SV=1
          Length = 382

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +1

Query: 259 CDNVVLSLGLGPPADKAAAASQEQNTG-IVDQQIR 360
           CD VV ++GL P  D AAAA  + N G +VD+Q+R
Sbjct: 230 CDLVVSAIGLRPRTDLAAAAGLQTNRGVVVDRQLR 264


>tr|Q1I2R6|Q1I2R6_PSEE4 Rubredoxin-NAD(+) reductase OS=Pseudomonas
           entomophila (strain L48) GN=rubB PE=4 SV=1
          Length = 382

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 18/35 (51%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +1

Query: 259 CDNVVLSLGLGPPADKAAAASQEQNTG-IVDQQIR 360
           CD VV ++GL P  D AAAA  + N G +VD+Q+R
Sbjct: 230 CDLVVSAIGLRPRTDLAAAAGLQVNRGVVVDRQLR 264


>tr|B5E7S9|B5E7S9_GEOBB 4Fe-4S ferredoxin iron-sulfur binding domain
           protein OS=Geobacter bemidjiensis (strain Bem / ATCC
           BAA-1014 / DSM 16622) GN=Gbem_1447 PE=4 SV=1
          Length = 1012

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
 Frame = +1

Query: 172 RDYISLG--LTGAAPEQMLTSSIPSGVDKMECDNVVLSLGLGPPADKAAAASQ 324
           R Y+++G  +  +    +  S++  GV + E D VVLS+GL PP D  A A++
Sbjct: 325 RSYVTVGREIESSKNVTIRYSTVDQGVKEEEFDMVVLSVGLNPPKDVEALATK 377


>tr|Q0YNI7|Q0YNI7_9DELT 4Fe-4S ferredoxin, iron-sulfur binding
           OS=Geobacter sp. FRC-32 GN=GeobDRAFT_3317 PE=4 SV=1
          Length = 1018

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
 Frame = +1

Query: 172 RDYISLGLTGAAPEQMLT--SSIPSGVDKMECDNVVLSLGLGPPADKAAAAS 321
           R Y+S+G        +    S+   GV + E D VVLS+GL PPAD    A+
Sbjct: 324 RSYVSIGRENPETRNVSIRYSTFDQGVKEEEFDMVVLSVGLNPPADVQTMAT 375


>tr|A8IM86|A8IM86_OECSM Silk fibroin OS=Oecophylla smaragdina
           GN=F2_WA PE=2 SV=1
          Length = 400

 Score = 34.3 bits (77), Expect = 4.8
 Identities = 35/140 (25%), Positives = 55/140 (39%), Gaps = 1/140 (0%)
 Frame = +1

Query: 91  SGSAQQDNTNVCASARAAGKDGTLVKERDYISLGLTGAAPEQMLTSSIPSGVDKMECDNV 270
           +G AQQ  T    +ARAA K    + ++    L L   A   +  +S    V   +    
Sbjct: 221 AGKAQQSATRALQAARAAAKAQAELTQKAAQILVLIAEAKAAVSRASADQSVCTSQAQAA 280

Query: 271 VLSLGLGPPADKAAAASQEQNTGIVDQQIRLKVTMTSAKPQHFWHESFRVSLSNDQYH-Q 447
                    A+ AA+A  E NT  +  +   +    +A     W ESF+  LS+     +
Sbjct: 281 SQIQSRASAAESAASAQSEANT--IAAEAVARADAEAASQAQAWAESFKRELSSVVLEAE 338

Query: 448 HMVNWQPQAEALSQGAPSFG 507
              +    A AL+ G+ S G
Sbjct: 339 ANASASASAGALASGSSSSG 358


>tr|B3JSZ6|B3JSZ6_9DELT 4Fe-4S ferredoxin iron-sulfur binding domain
           protein OS=Geobacter sp. M21 GN=GM21DRAFT_0691 PE=4 SV=1
          Length = 1012

 Score = 33.9 bits (76), Expect = 6.3
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
 Frame = +1

Query: 172 RDYISLG--LTGAAPEQMLTSSIPSGVDKMECDNVVLSLGLGPPADKAAAASQ 324
           R Y+++G  +  +    +  S++  GV + E D VVLS+GL PP D  A A +
Sbjct: 325 RSYVTVGREIESSKNVTIRYSTVDQGVKEEEFDMVVLSVGLNPPKDVEALAEK 377