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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912742
Clone id YMU001_000022_D04
Library
Length 604
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_D04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TACATGCCGTGACTTTTCCTTTGGCATATAGTACCTGTGTGCGCACATAAGAGACTTGTG
AAACTTTAGTTCCACCACAACTATATAAGTGAGAAATTGCACTTCCATTTAAATTAATCT
TCTACCATTCGGATGATGTAAGCTATGATTAGATAGCCCAGCCATAGGTTTAACAATACC
TTCGTCACATTGCCAGTGGAGCCCACCACTTTGTCATGTTGCCATCAGATCAATCATGTC
TTCATCTGCTGTGGAGCCCATCTGTAATAAAACAGACTTCCTCCACGATAGAGCTAAAAC
AAAAATTTCTTTTAGCTGAATGTGAAAGCTAGTACCAAGTCTAAATGAACAACATTTAGA
CTCGAGGCAACAGCTTCAATGCTTGCAGGACTACAAGTCCAATCTAGCAGTGCAGATGCA
TTATTGTTGAGAATTTTGGAAGTTTATGATGATTGGCAGAAGCCAAAGTGAAAGCATAAC
CCTTTTAGACTCTCTTTGTCATCATCAAACTTCTTTTTTACCCAAAAAGATCCTTCCATG
GTCAAATCGATCGCAAGATGTAAAAACATTCTTGCCATTATTTTCAATGCATACATTTGA
AGTG
■■Homology search results ■■ -
sp_hit_id Q59068
Definition sp|Q59068|Y1674_METJA Uncharacterized protein MJ1674 OS=Methanocaldococcus jannaschii
Align length 74
Score (bit) 30.8
E-value 5.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912742|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_D04.
         (604 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q59068|Y1674_METJA Uncharacterized protein MJ1674 OS=Methanoc...    31   5.5  

>sp|Q59068|Y1674_METJA Uncharacterized protein MJ1674
           OS=Methanocaldococcus jannaschii GN=MJ1674 PE=4 SV=1
          Length = 634

 Score = 30.8 bits (68), Expect = 5.5
 Identities = 19/74 (25%), Positives = 36/74 (48%)
 Frame = -3

Query: 563 LHLAIDLTMEGSFWVKKKFDDDKESLKGLCFHFGFCQSS*TSKILNNNASALLDWTCSPA 384
           +H A+   +  ++ +K K  +DKE++K +  +   C      K +NNN   +      P 
Sbjct: 535 MHYAL-FKLSNAYNIKNK--EDKEAIKWVLLNQNLCSKHPILKEINNNYHKIFKNKDKPM 591

Query: 383 SIEAVASSLNVVHL 342
           S E + +S N++ L
Sbjct: 592 SNEILEASKNIIRL 605
tr_hit_id A1DAB7
Definition tr|A1DAB7|A1DAB7_NEOFI Putative uncharacterized protein OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL 181)
Align length 51
Score (bit) 35.0
E-value 3.4
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912742|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_D04.
         (604 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A1DAB7|A1DAB7_NEOFI Putative uncharacterized protein OS=Neosa...    35   3.4  
tr|Q4WB27|Q4WB27_ASPFU Rhamnogalacturonase, putative OS=Aspergil...    35   4.4  
tr|B0YAT3|B0YAT3_ASPFC Rhamnogalacturonase, putative OS=Aspergil...    35   4.4  
tr|A9AQ21|A9AQ21_BURM1 Major facilitator superfamily MFS_1 (Perm...    33   9.8  

>tr|A1DAB7|A1DAB7_NEOFI Putative uncharacterized protein
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_094270 PE=4 SV=1
          Length = 559

 Score = 35.0 bits (79), Expect = 3.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 291 LSWRKSVLLQMGSTADEDMIDLMAT*QSGGLHWQCDEGIVKPMAGLSNHSL 139
           L+W  + + + G T  +D +D+  T + G  HW   E +V       NH+L
Sbjct: 74  LNWTSAEIYRKGKTKGQDFLDIQFTAKEGDFHWVIFEDLVGAYQYFVNHAL 124


>tr|Q4WB27|Q4WB27_ASPFU Rhamnogalacturonase, putative OS=Aspergillus
           fumigatus GN=AFUA_8G00820 PE=4 SV=1
          Length = 559

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 291 LSWRKSVLLQMGSTADEDMIDLMAT*QSGGLHWQCDEGIVKPMAGLSNHSL 139
           L+W  + + + G T  +D +D+  T + G  HW   E +V       NH+L
Sbjct: 74  LNWTSAEIYRRGKTNGQDFLDIQFTAKEGDFHWVIFEDLVGAYQYFVNHAL 124


>tr|B0YAT3|B0YAT3_ASPFC Rhamnogalacturonase, putative OS=Aspergillus
           fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163)
           GN=AFUB_085750 PE=4 SV=1
          Length = 559

 Score = 34.7 bits (78), Expect = 4.4
 Identities = 15/51 (29%), Positives = 25/51 (49%)
 Frame = -2

Query: 291 LSWRKSVLLQMGSTADEDMIDLMAT*QSGGLHWQCDEGIVKPMAGLSNHSL 139
           L+W  + + + G T  +D +D+  T + G  HW   E +V       NH+L
Sbjct: 74  LNWTSAEIYRRGKTNGQDFLDIQFTAKEGDFHWVIFEDLVGAYQYFVNHAL 124


>tr|A9AQ21|A9AQ21_BURM1 Major facilitator superfamily MFS_1
           (Permease of the major facilitator superfamily)
           OS=Burkholderia multivorans (strain ATCC 17616 / 249)
           GN=BMULJ_03392 PE=4 SV=1
          Length = 432

 Score = 33.5 bits (75), Expect = 9.8
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = -3

Query: 287 RGGSLFYYRWAPQQMKT*LI*WQHDKVVGSTGNVTKVLLNLWLGYLIIAYI 135
           +GG      W P  +KT     +H  V+G+ G +  ++L  W+GYL  AY+
Sbjct: 257 QGGYYAITTWLPTFLKT----ERHLTVMGTGGYLAMIILGSWVGYLTSAYL 303