BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912743|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_D05.
         (537 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q44524|DHNO_AGRVI D-nopaline dehydrogenase OS=Agrobacterium v...    35   0.30 
sp|P14078|POL_HTL1C Gag-Pro-Pol polyprotein OS=Human T-cell leuk...    34   0.51 
sp|P0C211|POL_HTL1L Gag-Pro-Pol polyprotein OS=Human T-cell leuk...    32   1.9  
sp|P03362|POL_HTL1A Gag-Pro-Pol polyprotein OS=Human T-cell leuk...    32   1.9  
sp|P00386|DHNO_AGRT7 D-nopaline dehydrogenase OS=Agrobacterium t...    31   4.3  
sp|P26896|IL2RB_RAT Interleukin-2 receptor subunit beta OS=Rattu...    30   7.4  

>sp|Q44524|DHNO_AGRVI D-nopaline dehydrogenase OS=Agrobacterium
           vitis GN=nos PE=3 SV=1
          Length = 412

 Score = 34.7 bits (78), Expect = 0.30
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +3

Query: 84  SCCSLPLPGEYHQPVTTCISIIMSGHLG*RRVSFWMISKHTTYCSQTNLWDV--HCSSTI 257
           S  SLP+P   H P+   + ++ SGH G   ++ W  S+H +    T LW    H  S  
Sbjct: 6   SSTSLPVPAAGHHPLPLTVGVLGSGHAG-TALAAWFASRHVS----TALWAPADHPGSIS 60

Query: 258 SWFSQKYIC*LENIQNPLFTV 320
           +  + + +   E + N  FTV
Sbjct: 61  AIKANEGVVTTEGVINGSFTV 81


>sp|P14078|POL_HTL1C Gag-Pro-Pol polyprotein OS=Human T-cell leukemia
            virus 1 (isolate Caribbea HS-35 subtype A) GN=gag-pro-pol
            PE=3 SV=3
          Length = 1462

 Score = 33.9 bits (76), Expect = 0.51
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +2

Query: 359  PVLQISP-DIKAFPKCFKGSCSL--SRISEQSSRLRSCSICFQWNQTHHM 499
            PVLQ+SP D+ +F  C + + +L  +  +E S+ LRSC  C + N  H M
Sbjct: 1163 PVLQLSPADLHSFTHCGQTALTLQGATTTEASNILRSCHACRKNNPQHQM 1212


>sp|P0C211|POL_HTL1L Gag-Pro-Pol polyprotein OS=Human T-cell leukemia
            virus 1 (isolate Melanesia mel5 subtype C) GN=gag-pro-pol
            PE=3 SV=2
          Length = 1462

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
 Frame = +2

Query: 359  PVLQISP-DIKAFPKCFKGSCSL--SRISEQSSRLRSCSICFQWNQTHHM 499
            P+LQ+SP ++ +F  C + + +L  +  +E S+ LRSC  C + N  H M
Sbjct: 1163 PILQLSPAELHSFTHCGQTALTLQGATTTEASNILRSCHACRKNNPQHQM 1212


>sp|P03362|POL_HTL1A Gag-Pro-Pol polyprotein OS=Human T-cell leukemia
            virus 1 (strain Japan ATK-1 subtype A) GN=gag-pro-pol
            PE=1 SV=3
          Length = 1462

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
 Frame = +2

Query: 359  PVLQISP-DIKAFPKCFKGSCSL--SRISEQSSRLRSCSICFQWNQTHHM 499
            PVLQ+SP ++ +F  C + + +L  +  +E S+ LRSC  C   N  H M
Sbjct: 1163 PVLQLSPAELHSFTHCGQTALTLQGATTTEASNILRSCHACRGGNPQHQM 1212


>sp|P00386|DHNO_AGRT7 D-nopaline dehydrogenase OS=Agrobacterium
           tumefaciens (strain T37) GN=nos PE=3 SV=1
          Length = 413

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +3

Query: 84  SCCSLPLPGEYHQPVTTCISIIMSGHLG*RRVSFWMISKHTTYCSQTNLW 233
           S  SLP+    H P+   + ++ SGH G   ++ W  S+H      T LW
Sbjct: 6   SATSLPISAADHHPLPLTVGVLGSGHAG-TALAAWFASRHV----PTALW 50


>sp|P26896|IL2RB_RAT Interleukin-2 receptor subunit beta OS=Rattus
           norvegicus GN=Il2rb PE=2 SV=1
          Length = 537

 Score = 30.0 bits (66), Expect = 7.4
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 8/82 (9%)
 Frame = +3

Query: 195 SKHTTYCSQTNLWDVHCSST----ISWFSQKYIC*LENIQN----PLFTVCILCTKSKIW 350
           S H    S    W+  C  T     SW     +  L + Q+     L ++ ++C + K W
Sbjct: 58  SCHIHAKSDMRHWNKTCELTPVRQASWACNLILGPLPDSQSLTSVDLLSLSVVCWEEKGW 117

Query: 351 RRSLSCRFHLISRLFLNASRAL 416
           RR  +C FH    L L A  +L
Sbjct: 118 RRVKTCTFHPFDNLRLIAPHSL 139

BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912743|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_D05.
         (537 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B3RY76|B3RY76_TRIAD Putative uncharacterized protein OS=Trich...    37   0.65 
tr|Q44443|Q44443_9RHIZ Nopaline synthase OS=Agrobacterium tumefa...    35   3.2  

>tr|B3RY76|B3RY76_TRIAD Putative uncharacterized protein OS=Trichoplax
            adhaerens GN=TRIADDRAFT_56463 PE=4 SV=1
          Length = 5245

 Score = 37.0 bits (84), Expect = 0.65
 Identities = 17/50 (34%), Positives = 29/50 (58%)
 Frame = +2

Query: 371  ISPDIKAFPKCFKGSCSLSRISEQSSRLRSCSICFQWNQTHHMHSPTTNN 520
            +SPD  A  + + G  S + +++ +++L   SI  + NQ HH H P T+N
Sbjct: 3819 LSPDKLAIMENYLGKKSPTNLAQTNNQLTGLSITEEMNQNHHHHHPITSN 3868


>tr|Q44443|Q44443_9RHIZ Nopaline synthase OS=Agrobacterium
           tumefaciens GN=nos PE=4 SV=1
          Length = 412

 Score = 34.7 bits (78), Expect = 3.2
 Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 2/81 (2%)
 Frame = +3

Query: 84  SCCSLPLPGEYHQPVTTCISIIMSGHLG*RRVSFWMISKHTTYCSQTNLWDV--HCSSTI 257
           S  SLP+P   H P+   + ++ SGH G   ++ W  S+H +    T LW    H  S  
Sbjct: 6   SSTSLPVPAAGHHPLPLTVGVLGSGHAG-TALAAWFASRHVS----TALWAPADHPGSIS 60

Query: 258 SWFSQKYIC*LENIQNPLFTV 320
           +  + + +   E + N  FTV
Sbjct: 61  AIKANEGVVTTEGVINGSFTV 81