BP912744 |
Clone id |
YMU001_000022_D06 |
Library |
YMU01 |
Length |
556 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000022_D06. |
Accession |
BP912744 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1147Contig1 |
Sequence |
CGAGCTCAAAATCTCCTGTTTGGCGAACTAACAGACTGCTGCCATCTTCGCTTGACTGCC TTCCAGTTGATGATGACTAGCACACGAGGGTTGATGATGGAAGTTGCTCCATATGGAAGG CTTCCAATGAGTAAAACCTATCTTTTTCCTGAGGGTGCTGCTAGGCTTCCAGGATTTTGC AGCCTGGTTGGTGGTGGTTGCAACTTGACTGGTATGCAAAGGAAGGTAAACAGATATTGT CACCAGCATTCCCGATGGCAGACAATGATTCAGAATTCCTTGACTCAGCTTGCTGAGAAT GGCAGTACAATTTCTGCCAATGTTGACAAGGAACCCCACAAATATTTCGATCAGGTTATG ATTACAGTGCGCTCAGGCGATGGGGGTCATGGAGCTGTTCTCAGTTTACCACGCACAACC ATGAAAGGTCTTTCAAAAAACACAGATAGAGACCTATTTCATAAGCGAAGGAAAATGAAG AGGGAGACTGATGGTACTGTAATTTTGCCCATGGGTGGTCATGGAGGAGATGTGGTAATC ATCGCAAGTGACAGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q43497 |
Definition |
sp|Q43497|MDAR_SOLLC Monodehydroascorbate reductase OS=Solanum lycopersicum |
Align length |
32 |
Score (bit) |
48.1 |
E-value |
3.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912744|Adiantum capillus-veneris mRNA, clone: YMU001_000022_D06. (556 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q43497|MDAR_SOLLC Monodehydroascorbate reductase OS=Solanum l... 48 3e-05 sp|Q9LFA3|MDAR3_ARATH Probable monodehydroascorbate reductase, c... 48 4e-05 sp|Q40977|MDAR_PEA Monodehydroascorbate reductase OS=Pisum sativ... 45 2e-04 sp|Q42711|MDARS_CUCSA Monodehydroascorbate reductase, seedling i... 44 5e-04 sp|P92947|MDARP_ARATH Monodehydroascorbate reductase, chloroplas... 37 0.050 sp|Q9LK94|MDAR2_ARATH Probable monodehydroascorbate reductase, c... 36 0.15 sp|Q6ZWH5|NEK10_HUMAN Serine/threonine-protein kinase Nek10 OS=H... 33 0.72 sp|Q3UGM2|NEK10_MOUSE Serine/threonine-protein kinase Nek10 OS=M... 31 3.6 sp|Q9M190|FBL49_ARATH Putative F-box/LRR-repeat protein At3g4277... 31 4.7 sp|Q06717|GSTG_BPT2 Beta-glucosyl-HMC-alpha-glucosyl-transferase... 30 8.0
>sp|Q43497|MDAR_SOLLC Monodehydroascorbate reductase OS=Solanum lycopersicum GN=AFRR PE=1 SV=1 Length = 433
Score = 48.1 bits (113), Expect = 3e-05 Identities = 23/32 (71%), Positives = 24/32 (75%) Frame = +1
Query: 103 VAPYGRLPMSKTYLFPEGAARLPGFCSLVGGG 198 VAPY R +SK YLFPEGAARLPGF VG G Sbjct: 42 VAPYERPALSKAYLFPEGAARLPGFHVCVGSG 73
>sp|Q9LFA3|MDAR3_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 3 OS=Arabidopsis thaliana GN=At3g52880 PE=2 SV=1 Length = 434
Score = 47.8 bits (112), Expect = 4e-05 Identities = 23/32 (71%), Positives = 24/32 (75%) Frame = +1
Query: 103 VAPYGRLPMSKTYLFPEGAARLPGFCSLVGGG 198 VAPY R +SK YLFPEGAARLPGF VG G Sbjct: 42 VAPYERPALSKGYLFPEGAARLPGFHCCVGSG 73
>sp|Q40977|MDAR_PEA Monodehydroascorbate reductase OS=Pisum sativum PE=1 SV=1 Length = 433
Score = 45.1 bits (105), Expect = 2e-04 Identities = 21/32 (65%), Positives = 23/32 (71%) Frame = +1
Query: 103 VAPYGRLPMSKTYLFPEGAARLPGFCSLVGGG 198 VAPY R +SK YLFPE ARLPGF + VG G Sbjct: 41 VAPYERPALSKAYLFPESPARLPGFHTCVGSG 72
>sp|Q42711|MDARS_CUCSA Monodehydroascorbate reductase, seedling isozyme OS=Cucumis sativus PE=2 SV=1 Length = 434
Score = 43.9 bits (102), Expect = 5e-04 Identities = 21/32 (65%), Positives = 22/32 (68%) Frame = +1
Query: 103 VAPYGRLPMSKTYLFPEGAARLPGFCSLVGGG 198 VAPY R +SK YLFPE ARLPGF VG G Sbjct: 42 VAPYERPALSKAYLFPESPARLPGFHVCVGSG 73
>sp|P92947|MDARP_ARATH Monodehydroascorbate reductase, chloroplastic OS=Arabidopsis thaliana GN=At1g63940 PE=2 SV=3 Length = 493
Score = 37.4 bits (85), Expect = 0.050 Identities = 19/33 (57%), Positives = 23/33 (69%), Gaps = 2/33 (6%) Frame = +1
Query: 106 APYGRLPMSKTYLFP--EGAARLPGFCSLVGGG 198 APY R ++K YLFP + ARLPGF + VGGG Sbjct: 98 APYERPALTKAYLFPPEKKPARLPGFHTCVGGG 130
>sp|Q9LK94|MDAR2_ARATH Probable monodehydroascorbate reductase, cytoplasmic isoform 2 OS=Arabidopsis thaliana GN=At3g27820 PE=2 SV=1 Length = 488
Score = 35.8 bits (81), Expect = 0.15 Identities = 17/30 (56%), Positives = 20/30 (66%) Frame = +1
Query: 103 VAPYGRLPMSKTYLFPEGAARLPGFCSLVG 192 VAPY R +SK +L PE ARLP F + VG Sbjct: 41 VAPYERPALSKGFLLPEAPARLPSFHTCVG 70
>sp|Q6ZWH5|NEK10_HUMAN Serine/threonine-protein kinase Nek10 OS=Homo sapiens GN=NEK10 PE=2 SV=2 Length = 1172
Score = 33.5 bits (75), Expect = 0.72 Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 1/95 (1%) Frame = +1
Query: 220 RKVNRYCHQHSRWQTMIQNSLTQLAENGSTISANVDKEPHKYFDQVMITVRSGDGGHGAV 399 R ++ Y S+ ++++ L Q+AEN +I+ N K P KY I G G G V Sbjct: 476 RDISAYEELVSKLNLLVEDELKQIAENIESINQN--KAPLKYIGNYAILDHLGSGAFGCV 533
Query: 400 LSLPRTTMKGLSKNTDRDLFHKR-RKMKRETDGTV 501 + + + + L + +L + K K++ D +V Sbjct: 534 YKVRKHSGQNLLAMKEVNLHNPAFGKDKKDRDSSV 568
>sp|Q3UGM2|NEK10_MOUSE Serine/threonine-protein kinase Nek10 OS=Mus musculus GN=Nek10 PE=2 SV=2 Length = 1111
Score = 31.2 bits (69), Expect = 3.6 Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 1/95 (1%) Frame = +1
Query: 220 RKVNRYCHQHSRWQTMIQNSLTQLAENGSTISANVDKEPHKYFDQVMITVRSGDGGHGAV 399 R + Y S+ ++++ L Q+AEN +I N K P KY + G G G V Sbjct: 476 RDIGAYKDLVSQLNLLLEDELKQIAENIESI--NQKKAPLKYIGDYAVLDHLGSGAFGCV 533
Query: 400 LSLPRTTMKGLSKNTDRDLFHKR-RKMKRETDGTV 501 + + + + L + +L + K K++ D +V Sbjct: 534 YKVRKRSGQNLLAMKEVNLHNPAFGKDKKDRDSSV 568
>sp|Q9M190|FBL49_ARATH Putative F-box/LRR-repeat protein At3g42770 OS=Arabidopsis thaliana GN=At3g42770 PE=4 SV=1 Length = 532
Score = 30.8 bits (68), Expect = 4.7 Identities = 16/45 (35%), Positives = 26/45 (57%) Frame = -2
Query: 267 HCLPSGMLVTISVYLPLHTSQVATTTNQAAKSWKPSSTLRKKIGF 133 +CLP +LV I +LP ++ AT+T+ +K W+ TL + F Sbjct: 2 NCLPDELLVQILSFLP---TKEATSTSLLSKRWRTLFTLSPNLDF 43
>sp|Q06717|GSTG_BPT2 Beta-glucosyl-HMC-alpha-glucosyl-transferase OS=Enterobacteria phage T2 PE=4 SV=1 Length = 280
Score = 30.0 bits (66), Expect = 8.0 Identities = 18/67 (26%), Positives = 28/67 (41%) Frame = +1
Query: 112 YGRLPMSKTYLFPEGAARLPGFCSLVGGGCNLTGMQRKVNRYCHQHSRWQTMIQNSLTQL 291 Y L + K YL G A+ PG CS + ++NR + +RW+T L Sbjct: 187 YPHLALFK-YLVVSGKAQAPGGCSSIRSNSKHNRALEQINREFPEQARWKTSNIEKRKSL 245
Query: 292 AENGSTI 312 E ++ Sbjct: 246 GEEDESL 252
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A5B1B5 |
Definition |
tr|A5B1B5|A5B1B5_VITVI Putative uncharacterized protein OS=Vitis vinifera |
Align length |
88 |
Score (bit) |
93.2 |
E-value |
8.0e-18 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912744|Adiantum capillus-veneris mRNA, clone: YMU001_000022_D06. (556 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A5B1B5|A5B1B5_VITVI Putative uncharacterized protein OS=Vitis... 93 8e-18 tr|A9SVV1|A9SVV1_PHYPA Predicted protein OS=Physcomitrella paten... 91 3e-17 tr|Q851Q6|Q851Q6_ORYSJ Os03g0799700 protein OS=Oryza sativa subs... 82 3e-14 tr|Q10C01|Q10C01_ORYSJ GTP1/OBG family protein, expressed OS=Ory... 82 3e-14 tr|B8ALC2|B8ALC2_ORYSI Putative uncharacterized protein OS=Oryza... 82 3e-14 tr|A3ANP1|A3ANP1_ORYSJ Putative uncharacterized protein OS=Oryza... 82 3e-14 tr|B6SYY3|B6SYY3_MAIZE Small GTP-binding protein domain OS=Zea m... 79 2e-13 tr|B6SV10|B6SV10_MAIZE Small GTP-binding protein domain OS=Zea m... 79 2e-13 tr|B4FAD3|B4FAD3_MAIZE Putative uncharacterized protein OS=Zea m... 79 2e-13 tr|A7NT41|A7NT41_VITVI Chromosome chr18 scaffold_1, whole genome... 52 3e-05 tr|Q0GA76|Q0GA76_RHEAU Monodehydroascorbate reductase OS=Rheum a... 49 1e-04 tr|A7PPG6|A7PPG6_VITVI Chromosome chr8 scaffold_23, whole genome... 48 3e-04 tr|A5JPK7|A5JPK7_VITVI Monodehydroascorbate reductase OS=Vitis v... 48 3e-04 tr|Q93X74|Q93X74_BRARP Monodehydroascorbate reductase OS=Brassic... 48 4e-04 tr|Q75UU6|Q75UU6_BRAOL Monodehydroascorbate reductase OS=Brassic... 48 4e-04 tr|Q0WUV6|Q0WUV6_ARATH Monodehydroascorbate reductase (NADH)-lik... 48 4e-04 tr|B8XF12|B8XF12_ONCHC Monodehydroascorbate reductase OS=Oncidiu... 47 7e-04 tr|Q93YG1|Q93YG1_MESCR Monodehydroascorbate reductase OS=Mesembr... 47 0.001 tr|A9P7V5|A9P7V5_POPTR Putative uncharacterized protein OS=Popul... 47 0.001 tr|A9NUH7|A9NUH7_PICSI Putative uncharacterized protein OS=Picea... 47 0.001 tr|A0MQ80|A0MQ80_ACAEB Monodehydroascorbate reductase OS=Acanthu... 47 0.001 tr|A7NT40|A7NT40_VITVI Chromosome chr18 scaffold_1, whole genome... 46 0.001 tr|A3C1M2|A3C1M2_ORYSJ Putative uncharacterized protein OS=Oryza... 46 0.002 tr|A2Z468|A2Z468_ORYSI Putative uncharacterized protein OS=Oryza... 46 0.002 tr|Q9SXX0|Q9SXX0_ORYSJ Monodehydroascorbate reductase (Fragment)... 45 0.003 tr|Q6ZJ08|Q6ZJ08_ORYSJ Os08g0557600 protein OS=Oryza sativa subs... 45 0.003 tr|Q66PF9|Q66PF9_PEA Monodehydroascorbate reductase I OS=Pisum s... 45 0.003 tr|Q5XWE3|Q5XWE3_PEA Monodehydroascorbate reductase II (Fragment... 45 0.003 tr|Q2I826|Q2I826_PHYPA Monodehydroascorbate reductase III OS=Phy... 45 0.003 tr|B7ZWQ5|B7ZWQ5_MEDTR Putative uncharacterized protein (Fragmen... 45 0.003
>tr|A5B1B5|A5B1B5_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_037057 PE=4 SV=1 Length = 484
Score = 93.2 bits (230), Expect = 8e-18 Identities = 47/88 (53%), Positives = 63/88 (71%), Gaps = 2/88 (2%) Frame = +1
Query: 295 ENGSTISANVDKEPHKYFDQVMITVRSGDGGHGAVLSLP--RTTMKGLSKNTDRDLFHKR 468 E+ S +++ +EPHKYFDQV+ITVRSGDGGHGA+LS+P R K K+ D+D K+ Sbjct: 65 ESPSPGPSSLIREPHKYFDQVLITVRSGDGGHGAILSMPNQRAPSKPQGKH-DKDKMRKK 123
Query: 469 RKMKRETDGTVILPMGGHGGDVVIIASD 552 KR+ DG++ILP GGHGG V+I A + Sbjct: 124 SSYKRDFDGSLILPXGGHGGGVIIYADE 151
>tr|A9SVV1|A9SVV1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234170 PE=4 SV=1 Length = 566
Score = 91.3 bits (225), Expect = 3e-17 Identities = 49/100 (49%), Positives = 64/100 (64%), Gaps = 4/100 (4%) Frame = +1
Query: 268 IQNSLTQLAENGSTISANVDKEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTD 447 I SL + N S N+D EPHKYFDQV+ITVRSGDGG+GA L P+ + K Sbjct: 80 INCSLLKENANASEGPKNLDTEPHKYFDQVVITVRSGDGGNGATLKFPKPKVDDGDKK-- 137
Query: 448 RDLFHKRRKM----KRETDGTVILPMGGHGGDVVIIASDS 555 F K +K+ KR DG++ILP+GGHGGDV+++A +S Sbjct: 138 ---FKKEKKIPGTYKRGPDGSLILPLGGHGGDVILVADES 174
>tr|Q851Q6|Q851Q6_ORYSJ Os03g0799700 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0052F07.17 PE=4 SV=1 Length = 504
Score = 81.6 bits (200), Expect = 3e-14 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 6/87 (6%) Frame = +1
Query: 313 SANVDKEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDRDLFHKRR------K 474 +A + KE HKYFD ++TVR+GDGGHGAVL++P + K+ R +R Sbjct: 65 AAALSKEAHKYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVS 124
Query: 475 MKRETDGTVILPMGGHGGDVVIIASDS 555 KR DG+V LPMGGHGGDVV+ A ++ Sbjct: 125 YKRNYDGSVALPMGGHGGDVVVYADEA 151
>tr|Q10C01|Q10C01_ORYSJ GTP1/OBG family protein, expressed OS=Oryza sativa subsp. japonica GN=LOC_Os03g58540 PE=4 SV=1 Length = 382
Score = 81.6 bits (200), Expect = 3e-14 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 6/87 (6%) Frame = +1
Query: 313 SANVDKEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDRDLFHKRR------K 474 +A + KE HKYFD ++TVR+GDGGHGAVL++P + K+ R +R Sbjct: 65 AAALSKEAHKYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVS 124
Query: 475 MKRETDGTVILPMGGHGGDVVIIASDS 555 KR DG+V LPMGGHGGDVV+ A ++ Sbjct: 125 YKRNYDGSVALPMGGHGGDVVVYADEA 151
>tr|B8ALC2|B8ALC2_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_13922 PE=4 SV=1 Length = 504
Score = 81.6 bits (200), Expect = 3e-14 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 6/87 (6%) Frame = +1
Query: 313 SANVDKEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDRDLFHKRR------K 474 +A + KE HKYFD ++TVR+GDGGHGAVL++P + K+ R +R Sbjct: 65 AAALSKEAHKYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVS 124
Query: 475 MKRETDGTVILPMGGHGGDVVIIASDS 555 KR DG+V LPMGGHGGDVV+ A ++ Sbjct: 125 YKRNYDGSVALPMGGHGGDVVVYADEA 151
>tr|A3ANP1|A3ANP1_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_012413 PE=4 SV=1 Length = 789
Score = 81.6 bits (200), Expect = 3e-14 Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 6/87 (6%) Frame = +1
Query: 313 SANVDKEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDRDLFHKRR------K 474 +A + KE HKYFD ++TVR+GDGGHGAVL++P + K+ R +R Sbjct: 238 AAALSKEAHKYFDHAVVTVRAGDGGHGAVLAMPASPSTDAPKSPRRRSDKGKRSGVKKVS 297
Query: 475 MKRETDGTVILPMGGHGGDVVIIASDS 555 KR DG+V LPMGGHGGDVV+ A ++ Sbjct: 298 YKRNYDGSVALPMGGHGGDVVVYADEA 324
>tr|B6SYY3|B6SYY3_MAIZE Small GTP-binding protein domain OS=Zea mays PE=2 SV=1 Length = 507
Score = 79.0 bits (193), Expect = 2e-13 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Frame = +1
Query: 328 KEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDR----DLFHKRRKMKRETDG 495 KE HKYFD ++TVR+GDGGHGAVL++P +K R + K+ KR DG Sbjct: 74 KEAHKYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDG 133
Query: 496 TVILPMGGHGGDVVIIASDS 555 +V LP GGHGGDVV+ A ++ Sbjct: 134 SVALPTGGHGGDVVVYADEA 153
>tr|B6SV10|B6SV10_MAIZE Small GTP-binding protein domain OS=Zea mays PE=2 SV=1 Length = 507
Score = 79.0 bits (193), Expect = 2e-13 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Frame = +1
Query: 328 KEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDR----DLFHKRRKMKRETDG 495 KE HKYFD ++TVR+GDGGHGAVL++P +K R + K+ KR DG Sbjct: 74 KEAHKYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDG 133
Query: 496 TVILPMGGHGGDVVIIASDS 555 +V LP GGHGGDVV+ A ++ Sbjct: 134 SVALPTGGHGGDVVVYADEA 153
>tr|B4FAD3|B4FAD3_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 466
Score = 79.0 bits (193), Expect = 2e-13 Identities = 39/80 (48%), Positives = 51/80 (63%), Gaps = 4/80 (5%) Frame = +1
Query: 328 KEPHKYFDQVMITVRSGDGGHGAVLSLPRTTMKGLSKNTDR----DLFHKRRKMKRETDG 495 KE HKYFD ++TVR+GDGGHGAVL++P +K R + K+ KR DG Sbjct: 33 KEAHKYFDHAVVTVRAGDGGHGAVLAMPPAPSADAAKPRGRFNRGEKKSKKVSYKRNYDG 92
Query: 496 TVILPMGGHGGDVVIIASDS 555 +V LP GGHGGDVV+ A ++ Sbjct: 93 SVALPTGGHGGDVVVYADEA 112
>tr|A7NT41|A7NT41_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014527001 PE=4 SV=1 Length = 147
Score = 51.6 bits (122), Expect = 3e-05 Identities = 24/43 (55%), Positives = 34/43 (79%) Frame = +1
Query: 280 LTQLAENGSTISANVDKEPHKYFDQVMITVRSGDGGHGAVLSL 408 LT+ E+ S +++ +EP KYFDQV+ITV SG+GGHGA+LS+ Sbjct: 11 LTRAKESPSPGPSSLIREPQKYFDQVIITVCSGNGGHGAILSM 53
|