BP912751
Clone id YMU001_000022_E02
Library
Length 504
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_E02.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
TTTTTTTTTTTTTTTTTTCTAGAACCGTTGTAATCTAATGTTACAACCATTATTCATGGC
AAGGTTACTGCTCATTACCACGGTACAACCACTAACTCTTGGCATTGTGTTTACATGCCA
TGCTAAACCAAATGCAGGCTTGAATTAAATTGCAAATGCCTGCATTAAATACAAGGATAG
CTTGAGAAAGCATGGCAGCAAGGGCTCATCGTTATTGTACAACTTTGCATGGGAAGCAAG
CCTCCTGATTTCGGGAAGCAGCTTTCTATCAGTCAAAATTTTCTGTACATATCATAAAAT
ACATTTCTGTGTGGTAGTACACGATCTTCCCTCATATTGGAAAAAGATTGGGTGTATAGG
ACATTTGATATATGACAAGATTGGGCTACTAACTTTAATCCCCAGCCCCTGCAGACCAAA
TGGATAAGCTACCTTCGTAAAAATTTGCCACCAATTCCATCAATTACATTGTTGGCCTTG
TCATTGTAGACATGCCCCTCCCAT
■■Homology search results ■■ -
sp_hit_id Q7YM14
Definition sp|Q7YM14|MATK_QUERU Maturase K OS=Quercus rubra
Align length 22
Score (bit) 30.0
E-value 5.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912751|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E02.
(486 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7YM14|MATK_QUERU Maturase K OS=Quercus rubra GN=matK PE=3 SV=1 30 5.8
sp|Q75VA9|MATK_QUEPA Maturase K OS=Quercus palustris GN=matK PE=... 30 5.8

>sp|Q7YM14|MATK_QUERU Maturase K OS=Quercus rubra GN=matK PE=3 SV=1
Length = 504

Score = 30.0 bits (66), Expect = 5.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1

Query: 228 RRLASHAKLYNNDEPLLPCFLK 163
R++ A++++ND P++PCFLK
Sbjct: 248 RKIEHFAEVFSNDFPVIPCFLK 269


>sp|Q75VA9|MATK_QUEPA Maturase K OS=Quercus palustris GN=matK PE=3
SV=1
Length = 504

Score = 30.0 bits (66), Expect = 5.8
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = -1

Query: 228 RRLASHAKLYNNDEPLLPCFLK 163
R++ A++++ND P++PCFLK
Sbjct: 248 RKIEHFAEVFSNDFPVIPCFLK 269


tr_hit_id Q1QUW0
Definition tr|Q1QUW0|Q1QUW0_CHRSD HPP OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768)
Align length 27
Score (bit) 33.9
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912751|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E02.
(486 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1QUW0|Q1QUW0_CHRSD HPP OS=Chromohalobacter salexigens (strai... 34 4.2
tr|Q7ZTN9|Q7ZTN9_XENLA MGC54016 protein OS=Xenopus laevis GN=MGC... 33 9.1
tr|P70006|P70006_XENLA Hepatocyte growth factor-like protein OS=... 33 9.1

>tr|Q1QUW0|Q1QUW0_CHRSD HPP OS=Chromohalobacter salexigens (strain
DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=Csal_2401 PE=4
SV=1
Length = 178

Score = 33.9 bits (76), Expect = 4.2
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = -1

Query: 111 GLAWHVNTMPRVSGCTVVMSSNLAMNN 31
GLAWH MP +GCT+++S + +NN
Sbjct: 140 GLAWHFALMPVAAGCTLMLSVAVLINN 166


>tr|Q7ZTN9|Q7ZTN9_XENLA MGC54016 protein OS=Xenopus laevis
GN=MGC54016 PE=2 SV=1
Length = 709

Score = 32.7 bits (73), Expect = 9.1
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = -2

Query: 401 LVCRGWGLKLVAQSCHISNVLYTQSFSNMREDRVLPHRNVFYDMYRKF*LIESCFPKSG 225
L CR + +QSC + + +TQ+ SN VL RNV YD+Y+K I C +G
Sbjct: 64 LDCRSFDYNWKSQSCRL--LPWTQNSSN-----VLLQRNVQYDLYQKKDYIRDCVVGNG 115


>tr|P70006|P70006_XENLA Hepatocyte growth factor-like protein
OS=Xenopus laevis GN=mst1 PE=2 SV=1
Length = 717

Score = 32.7 bits (73), Expect = 9.1
Identities = 22/59 (37%), Positives = 31/59 (52%)
Frame = -2

Query: 401 LVCRGWGLKLVAQSCHISNVLYTQSFSNMREDRVLPHRNVFYDMYRKF*LIESCFPKSG 225
L CR + +QSC + + +TQ+ SN VL RNV YD+Y+K I C +G
Sbjct: 73 LDCRSFDYNWKSQSCRL--LPWTQNSSN-----VLLQRNVQYDLYQKKDYIRDCVVGNG 124