BP912754
Clone id YMU001_000022_E05
Library
Length 587
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_E05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTTTTTTTTTTGAGTCAGATTACTTTTGCCATTGAATAGAAAGCATTCCCCAACCCATGC
TCACGCCGAGCAGATTTGATACATGTACAACTTCATGGGAATAAAATTCTCCACCCAATC
AGCAAAACAGAAACATCTTTCATACTCAATGTTAGTCAGATCATAACATCGGTACTTAAC
CTCTACCATTCCCCTGTATAGGCTCCGATTTTGCCAAATTTGTAGCAAATATATCCAAAA
GCCTATACTGGGAATGGGCGTGTCAATCCATAATAGAGACAGCTTATGCCACAATCCTTT
CAATATAGTACATTGGACCTGGCCTACCTGTTTGGCCACATTTACACCAACATTAGTTCC
CCAACGATGGAGGCAGAAGAGGAGGACGTCCATCCTTGAATTGCCCTGAAGATCTTCTAA
ATGACCCTGAGAAATGTGGCGCCTCCATTTGCCCAAACCTTCTACTGTGTATGCGACCAC
CATTCCTAACAATACCCACTAAATTATCCCCCACTCCCTGCCGGTGACCTGGCTTCTCCT
TGCCAAACTCCTTCGTCACCACATCCTTACTTGCTATCATGCTCGAG
■■Homology search results ■■ -
sp_hit_id P38172
Definition sp|P38172|YBJ5_YEAST Uncharacterized protein YBL095W OS=Saccharomyces cerevisiae
Align length 66
Score (bit) 33.5
E-value 0.78
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912754|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E05.
(576 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P38172|YBJ5_YEAST Uncharacterized protein YBL095W OS=Saccharo... 33 0.78
sp|Q8TUF8|PRIL_METAC Probable DNA primase large subunit OS=Metha... 32 2.3
sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein ... 32 2.3
sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protei... 32 2.3
sp|B0JSV5|NDHK_MICAN NAD(P)H-quinone oxidoreductase subunit K OS... 32 3.0
sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protei... 31 3.9
sp|P78426|NKX61_HUMAN Homeobox protein Nkx-6.1 OS=Homo sapiens G... 31 5.1
sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis thal... 31 5.1
sp|Q9DCD5|TJAP1_MOUSE Tight junction-associated protein 1 OS=Mus... 30 6.6
sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens GN=T... 30 6.7

>sp|P38172|YBJ5_YEAST Uncharacterized protein YBL095W
OS=Saccharomyces cerevisiae GN=YBL095W PE=1 SV=1
Length = 270

Score = 33.5 bits (75), Expect = 0.78
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3

Query: 439 KWRRHISQGHLED--LQGNSRMDVLLFCL-HRWGTNVGVNVAKQVGQVQCTILKGLWHKL 269
K R+ I +GHLE L+ +SR + L H WG N +AK+ + C +++ W K
Sbjct: 204 KGRKCIIEGHLEQFPLEVSSRNGTRSWNLPHIWGFNHKQEMAKKFAKANCILVEPTWFKY 263

Query: 268 SLLWID 251
W+D
Sbjct: 264 -FKWLD 268


>sp|Q8TUF8|PRIL_METAC Probable DNA primase large subunit
OS=Methanosarcina acetivorans GN=priB PE=3 SV=1
Length = 371

Score = 32.0 bits (71), Expect = 2.3
Identities = 21/54 (38%), Positives = 31/54 (57%)
Frame = +2

Query: 17 AIE*KAFPNPCSRRADLIHVQLHGNKILHPISKTETSFILNVSQIITSVLNLYH 178
A+E + FP PC A L +VQ G + H + TSF+LNV + +LNL++
Sbjct: 221 AVEPELFP-PCISHA-LANVQ-GGVNLAHSMRFAMTSFLLNVGMSVEEILNLFN 271


>sp|Q5XIN6|LETM1_RAT LETM1 and EF-hand domain-containing protein 1,
mitochondrial OS=Rattus norvegicus GN=Letm1 PE=1 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 2.3
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = -3

Query: 334 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 155
V V K +GQ LK +H LLWIDT I + W L R R + + C
Sbjct: 146 VVVKKSLGQKILDELKHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRI---C 202

Query: 154 YDLTNIEYERCFCFADWVENFIPMKLYMY 68
DL + F ++E +P+ + ++
Sbjct: 203 ADLFRLVPFLVFVVVPFMEFLLPVVVKLF 231


>sp|O95202|LETM1_HUMAN LETM1 and EF-hand domain-containing protein
1, mitochondrial OS=Homo sapiens GN=LETM1 PE=1 SV=1
Length = 739

Score = 32.0 bits (71), Expect = 2.3
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = -3

Query: 334 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 155
V V K +GQ LK +H LLWIDT I + W L R R + + C
Sbjct: 147 VVVKKSLGQRVLDELKHYYHGFRLLWIDTKIAARMLWRILNGHSLTRRERRQFLRI---C 203

Query: 154 YDLTNIEYERCFCFADWVENFIPMKLYMY 68
DL + F ++E +P+ + ++
Sbjct: 204 ADLFRLVPFLVFVVVPFMEFLLPVAVKLF 232


>sp|B0JSV5|NDHK_MICAN NAD(P)H-quinone oxidoreductase subunit K
OS=Microcystis aeruginosa (strain NIES-843) GN=ndhK PE=3
SV=1
Length = 247

Score = 31.6 bits (70), Expect = 3.0
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +2

Query: 38 PNPCSRRADLIHVQLHGNKILHPISKTETSFILNVSQIITSVLNLYH 178
PNP S +I Q KIL+PI +T+ + L+ + I+T+V +LY+
Sbjct: 3 PNPTSEFKQIIEQQ--SEKILNPIERTKVTQDLSENVILTTVDDLYN 47


>sp|Q9Z2I0|LETM1_MOUSE LETM1 and EF-hand domain-containing protein
1, mitochondrial OS=Mus musculus GN=Letm1 PE=2 SV=1
Length = 738

Score = 31.2 bits (69), Expect = 3.9
Identities = 24/89 (26%), Positives = 38/89 (42%)
Frame = -3

Query: 334 VNVAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRC 155
V V K +GQ L+ +H LLWIDT I + W L R R + + C
Sbjct: 146 VVVRKSLGQKVLDELRHYYHGFRLLWIDTKIAARMLWRILNGHTLTRRERRQFLRI---C 202

Query: 154 YDLTNIEYERCFCFADWVENFIPMKLYMY 68
DL + F ++E +P+ + ++
Sbjct: 203 ADLFRLVPFLVFVVVPFMEFLLPVVVKLF 231


>sp|P78426|NKX61_HUMAN Homeobox protein Nkx-6.1 OS=Homo sapiens
GN=NKX6-1 PE=2 SV=1
Length = 367

Score = 30.8 bits (68), Expect = 5.1
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = +2

Query: 428 APPFAQTFYCVCDHHS*QYPLNYPPLPAGDLASPCQTPSSPHP 556
+PP A + + + + YP YPPLPAG +S + SS P
Sbjct: 19 SPPLA-ALHSMAEMKTPLYPAAYPPLPAGPPSSSSSSSSSSSP 60


>sp|Q9STT7|ATH4_ARATH Putative ABC2 homolog 4 OS=Arabidopsis
thaliana GN=ATH4 PE=3 SV=1
Length = 664

Score = 30.8 bits (68), Expect = 5.1
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Frame = -3

Query: 424 ISQGHLEDLQGNSRMDVLLFC--LHRWGTNVGVNVAKQVGQVQCTILKGLWHKLSLLWID 251
+S +LE LQG+ + F + + T + + +A +G + T + L L +
Sbjct: 206 VSNAYLEFLQGSGTKMLFDFVKEMPKQETRLRLEMASLIGPIFFTWVILLLFPFLLEGLS 265

Query: 250 TPIPSIGFWIYLLQIWQNRSLYRGMVE 170
P WIY+++++ SLYRG+ E
Sbjct: 266 FPRS----WIYIMELYPGFSLYRGLYE 288


>sp|Q9DCD5|TJAP1_MOUSE Tight junction-associated protein 1 OS=Mus
musculus GN=Tjap1 PE=1 SV=1
Length = 539

Score = 30.4 bits (67), Expect = 6.6
Identities = 13/19 (68%), Positives = 13/19 (68%)
Frame = +2

Query: 500 PLPAGDLASPCQTPSSPHP 556
PLPA D SP TPS PHP
Sbjct: 291 PLPAFDKLSPYPTPSPPHP 309


>sp|Q9BXR5|TLR10_HUMAN Toll-like receptor 10 OS=Homo sapiens
GN=TLR10 PE=1 SV=2
Length = 811

Score = 30.4 bits (67), Expect = 6.7
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = +1

Query: 115 NRNIFHTQC*SDHNIGT*--PLPFPCIGSDFAKFVANISKSLYWEW 246
+ N+FH SDH I P+PF CI + + K A + K Y EW
Sbjct: 714 HHNLFHEN--SDHIILILLEPIPFYCIPTRYHKLKALLEKKAYLEW 757


tr_hit_id Q187D4
Definition tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase OS=Clostridium difficile (strain 630)
Align length 38
Score (bit) 35.0
E-value 2.9
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912754|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E05.
(576 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase... 35 2.9
tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallu... 34 6.5
tr|B5VDP8|B5VDP8_YEAS6 YBL095Wp-like protein OS=Saccharomyces ce... 33 8.6
tr|B3LNM6|B3LNM6_YEAS1 Putative uncharacterized protein OS=Sacch... 33 8.6
tr|A6ZKK8|A6ZKK8_YEAS7 Conserved protein OS=Saccharomyces cerevi... 33 8.6

>tr|Q187D4|Q187D4_CLOD6 Putative O-acetylhomoserine sulfhydrylase
OS=Clostridium difficile (strain 630) GN=cysD PE=3 SV=1
Length = 421

Score = 35.0 bits (79), Expect = 2.9
Identities = 19/38 (50%), Positives = 28/38 (73%), Gaps = 6/38 (15%)
Frame = +2

Query: 284 SFQYSTLD-LAYLF-----GHIYTNISSPTMEAEEEDV 379
+F+YS++D LA LF GHIY+ IS+PT++A EE +
Sbjct: 30 TFKYSSIDQLAELFDLKVDGHIYSRISNPTIQAFEEKI 67


>tr|Q5ZK33|Q5ZK33_CHICK Putative uncharacterized protein OS=Gallus
gallus GN=RCJMB04_13i11 PE=2 SV=1
Length = 752

Score = 33.9 bits (76), Expect = 6.5
Identities = 25/87 (28%), Positives = 38/87 (43%)
Frame = -3

Query: 328 VAKQVGQVQCTILKGLWHKLSLLWIDTPIPSIGFWIYLLQIWQNRSLYRGMVEVKYRCYD 149
V K +GQ LK +H LLWIDT I + W L +R R + + C D
Sbjct: 146 VKKSIGQRIVDELKHYYHGFRLLWIDTKIAARMLWRILHGNTLSRRERRQFLRI---CAD 202

Query: 148 LTNIEYERCFCFADWVENFIPMKLYMY 68
L + F ++E +P+ L ++
Sbjct: 203 LFRLVPFLVFLVVPFMEFLLPVALKLF 229


>tr|B5VDP8|B5VDP8_YEAS6 YBL095Wp-like protein OS=Saccharomyces
cerevisiae (strain AWRI1631) GN=AWRI1631_20110 PE=4 SV=1
Length = 270

Score = 33.5 bits (75), Expect = 8.6
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3

Query: 439 KWRRHISQGHLED--LQGNSRMDVLLFCL-HRWGTNVGVNVAKQVGQVQCTILKGLWHKL 269
K R+ I +GHLE L+ +SR + L H WG N +AK+ + C +++ W K
Sbjct: 204 KGRKCIIEGHLEQFPLEVSSRNGTRSWNLPHIWGFNHKQEMAKKFAKANCILVEPTWFKY 263

Query: 268 SLLWID 251
W+D
Sbjct: 264 -FKWLD 268


>tr|B3LNM6|B3LNM6_YEAS1 Putative uncharacterized protein
OS=Saccharomyces cerevisiae (strain RM11-1a)
GN=SCRG_03053 PE=4 SV=1
Length = 270

Score = 33.5 bits (75), Expect = 8.6
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3

Query: 439 KWRRHISQGHLED--LQGNSRMDVLLFCL-HRWGTNVGVNVAKQVGQVQCTILKGLWHKL 269
K R+ I +GHLE L+ +SR + L H WG N +AK+ + C +++ W K
Sbjct: 204 KGRKCIIEGHLEQFPLEVSSRNGTRSWNLPHIWGFNHKQEMAKKFAKANCILVEPTWFKY 263

Query: 268 SLLWID 251
W+D
Sbjct: 264 -FKWLD 268


>tr|A6ZKK8|A6ZKK8_YEAS7 Conserved protein OS=Saccharomyces
cerevisiae (strain YJM789) GN=SCY_0128 PE=4 SV=1
Length = 270

Score = 33.5 bits (75), Expect = 8.6
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = -3

Query: 439 KWRRHISQGHLED--LQGNSRMDVLLFCL-HRWGTNVGVNVAKQVGQVQCTILKGLWHKL 269
K R+ I +GHLE L+ +SR + L H WG N +AK+ + C +++ W K
Sbjct: 204 KGRKCIIEGHLEQFPLEVSSRNGTRSWNLPHIWGFNHKQEMAKKFAKANCILVEPTWFKY 263

Query: 268 SLLWID 251
W+D
Sbjct: 264 -FKWLD 268