| Report |
 BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912758|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E09.
(511 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa prot... 91 1e-19
sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa prot... 91 1e-19
sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa prot... 91 1e-19
sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein OS=Sa... 92 3e-19
sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein OS=Sa... 90 9e-19
sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus ty... 49 1e-05
sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus... 47 5e-05
sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus typ... 46 1e-04
sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6 OS=Caenorha... 45 3e-04
sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus... 44 6e-04
sp|O93209|POL_FFV Pro-Pol polyprotein OS=Feline foamy virus GN=p... 44 6e-04
sp|P31792|POL_FENV1 Pol polyprotein (Fragment) OS=Feline endogen... 42 0.001
sp|P26809|POL_MLVFF Pol polyprotein OS=Friend murine leukemia vi... 42 0.002
sp|P26808|POL_MLVFP Pol polyprotein OS=Friend murine leukemia vi... 42 0.002
sp|P26810|POL_MLVF5 Pol polyprotein OS=Friend murine leukemia vi... 42 0.002
sp|P08361|POL_MLVCB Pol polyprotein (Fragment) OS=Cas-Br-E murin... 42 0.002
sp|P03355|POL_MLVMO Pol polyprotein OS=Moloney murine leukemia v... 41 0.003
sp|P10272|POL_BAEVM Pol polyprotein OS=Baboon endogenous virus (... 41 0.003
sp|P31795|POL_MLVRK Pol polyprotein (Fragment) OS=Radiation muri... 40 0.008
sp|P11227|POL_MLVRD Pol polyprotein OS=Radiation murine leukemia... 40 0.008
sp|Q9U3N4|INX6_CAEEL Innexin-6 OS=Caenorhabditis elegans GN=inx-... 39 0.018
sp|Q9TTC1|POL_KORV Pro-Pol polyprotein OS=Koala retrovirus GN=pr... 37 0.041
sp|P21414|POL_GALV Pol polyprotein OS=Gibbon ape leukemia virus ... 37 0.041
sp|P03360|POL_AVIRE Pol polyprotein (Fragment) OS=Avian reticulo... 37 0.054
sp|P20825|POL2_DROME Retrovirus-related Pol polyprotein from tra... 35 0.27
sp|P03361|POL_BLVJ Pol polyprotein OS=Bovine leukemia virus (iso... 32 1.7
sp|P04323|POL3_DROME Retrovirus-related Pol polyprotein from tra... 32 2.3
sp|Q9ZVR7|PSKR1_ARATH Phytosulfokine receptor 1 OS=Arabidopsis t... 31 2.9
sp|Q54S77|VPS15_DICDI Probable serine/threonine-protein kinase v... 31 3.8
sp|P25059|POL_BLVAU Pol polyprotein OS=Bovine leukemia virus (is... 31 3.9
>sp|Q9UR07|RTF23_SCHPO Retrotransposable element Tf2 155 kDa protein
type 3 OS=Schizosaccharomyces pombe GN=Tf2-11 PE=4 SV=1
Length = 1333
Score = 91.3 bits (225), Expect(2) = 1e-19
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Frame = -3
Query: 482 YSPC-PYPP---PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHL 315
Y P P PP P ES++MDFI LP + SG++ +++V+DRFSK A +P K++T++
Sbjct: 971 YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1029
Query: 314 ARLFVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIAN 135
AR+F ++ G P+ I++D D FTS WK ++FS + PQT+G++E N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 134 SMVLDLLKSYILDH 93
V LL+ H
Sbjct: 1090 QTVEKLLRCVCSTH 1103
Score = 24.3 bits (51), Expect(2) = 1e-19
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 66 LVEFAYNNTMHSSTKKT 16
LV+ +YNN +HS+T+ T
Sbjct: 1113 LVQQSYNNAIHSATQMT 1129
>sp|Q9C0R2|RTF22_SCHPO Retrotransposable element Tf2 155 kDa protein
type 2 OS=Schizosaccharomyces pombe GN=Tf2-7 PE=2 SV=1
Length = 1333
Score = 91.3 bits (225), Expect(2) = 1e-19
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Frame = -3
Query: 482 YSPC-PYPP---PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHL 315
Y P P PP P ES++MDFI LP + SG++ +++V+DRFSK A +P K++T++
Sbjct: 971 YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1029
Query: 314 ARLFVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIAN 135
AR+F ++ G P+ I++D D FTS WK ++FS + PQT+G++E N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 134 SMVLDLLKSYILDH 93
V LL+ H
Sbjct: 1090 QTVEKLLRCVCSTH 1103
Score = 24.3 bits (51), Expect(2) = 1e-19
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 66 LVEFAYNNTMHSSTKKT 16
LV+ +YNN +HS+T+ T
Sbjct: 1113 LVQQSYNNAIHSATQMT 1129
>sp|Q05654|RTF21_SCHPO Retrotransposable element Tf2 155 kDa protein
type 1 OS=Schizosaccharomyces pombe GN=Tf2-1 PE=2 SV=1
Length = 1333
Score = 91.3 bits (225), Expect(2) = 1e-19
Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 4/134 (2%)
Frame = -3
Query: 482 YSPC-PYPP---PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHL 315
Y P P PP P ES++MDFI LP + SG++ +++V+DRFSK A +P K++T++
Sbjct: 971 YGPLQPIPPSERPWESLSMDFITALPES-SGYNALFVVVDRFSKMAILVPCTKSITAEQT 1029
Query: 314 ARLFVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIAN 135
AR+F ++ G P+ I++D D FTS WK ++FS + PQT+G++E N
Sbjct: 1030 ARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPYRPQTDGQTERTN 1089
Query: 134 SMVLDLLKSYILDH 93
V LL+ H
Sbjct: 1090 QTVEKLLRCVCSTH 1103
Score = 24.3 bits (51), Expect(2) = 1e-19
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 66 LVEFAYNNTMHSSTKKT 16
LV+ +YNN +HS+T+ T
Sbjct: 1113 LVQQSYNNAIHSATQMT 1129
>sp|Q7LHG5|YI31B_YEAST Transposon Ty3-I Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-I PE=3 SV=2
Length = 1498
Score = 91.7 bits (226), Expect(2) = 3e-19
Identities = 53/134 (39%), Positives = 77/134 (57%)
Frame = -3
Query: 446 IAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLHGMPE 267
I+MDF+ LP T + + I +V+DRFSK AHFI KT+ + L L IF HG P
Sbjct: 1198 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 1257
Query: 266 TIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYILDHKT 87
TI SDRD R T+ ++ + + +G SS HPQT+G+SE + LL++Y+ T
Sbjct: 1258 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYV---ST 1314
Query: 86 QGEKYHLWWNLPTI 45
+ +H++ LP I
Sbjct: 1315 NIQNWHVY--LPQI 1326
Score = 22.3 bits (46), Expect(2) = 3e-19
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 504 RDKAQGLLQPLPI 466
R + GLLQPLPI
Sbjct: 1178 RPRLHGLLQPLPI 1190
>sp|Q99315|YG31B_YEAST Transposon Ty3-G Gag-Pol polyprotein
OS=Saccharomyces cerevisiae GN=TY3B-G PE=1 SV=3
Length = 1547
Score = 90.1 bits (222), Expect(2) = 9e-19
Identities = 53/134 (39%), Positives = 76/134 (56%)
Frame = -3
Query: 446 IAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLHGMPE 267
I+MDF+ LP T + + I +V+DRFSK AHFI KT+ + L L IF HG P
Sbjct: 1172 ISMDFVTGLPPTSNNLNMILVVVDRFSKRAHFIATRKTLDATQLIDLLFRYIFSYHGFPR 1231
Query: 266 TIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYILDHKT 87
TI SDRD R T+ ++ + + +G SS HPQT+G+SE + LL++Y T
Sbjct: 1232 TITSDRDVRMTADKYQELTKRLGIKSTMSSANHPQTDGQSERTIQTLNRLLRAYA---ST 1288
Query: 86 QGEKYHLWWNLPTI 45
+ +H++ LP I
Sbjct: 1289 NIQNWHVY--LPQI 1300
Score = 22.3 bits (46), Expect(2) = 9e-19
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -2
Query: 504 RDKAQGLLQPLPI 466
R + GLLQPLPI
Sbjct: 1152 RPRLHGLLQPLPI 1164
>sp|P27401|POL_SFV3L Pro-Pol polyprotein OS=Simian foamy virus type 3
(strain LK3) GN=pol PE=3 SV=2
Length = 1143
Score = 48.9 bits (115), Expect = 1e-05
Identities = 37/143 (25%), Positives = 68/143 (47%)
Frame = -3
Query: 458 PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLH 279
P + +D+I LP + +G+ + +V+D + P + TS A + +
Sbjct: 871 PFDKFFIDYIGPLPPS-NGYLHVLVVVDSMTGFVWLYPTKAPSTS---ATVKALNMLTSI 926
Query: 278 GMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYIL 99
+P+ I SD+ FTS + +N G L+FS+ +HPQ++GK E NS + LL ++
Sbjct: 927 AVPKVIHSDQGAAFTSATFADWAKNKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLV 986
Query: 98 DHKTQGEKYHLWWNLPTITRCTL 30
+ W++L + + L
Sbjct: 987 GRPAK------WYDLLPVVQLAL 1003
>sp|P14350|POL_FOAMV Pro-Pol polyprotein OS=Human spumaretrovirus
GN=pol PE=1 SV=2
Length = 1143
Score = 47.0 bits (110), Expect = 5e-05
Identities = 38/143 (26%), Positives = 66/143 (46%)
Frame = -3
Query: 458 PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLH 279
P + +D+I LP +Q G+ + +V+D + P + TS + L V +
Sbjct: 872 PFDKFFIDYIGPLPPSQ-GYLYVLVVVDGMTGFTWLYPTKAPSTSATVKSLNVLTSIAI- 929
Query: 278 GMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYIL 99
P+ I SD+ FTS + + G L+FS+ +HPQ+ K E NS + LL ++
Sbjct: 930 --PKVIHSDQGAAFTSSTFAEWAKERGIHLEFSTPYHPQSGSKVERKNSDIKRLLTKLLV 987
Query: 98 DHKTQGEKYHLWWNLPTITRCTL 30
T+ W++L + + L
Sbjct: 988 GRPTK------WYDLLPVVQLAL 1004
>sp|P23074|POL_SFV1 Pro-Pol polyprotein OS=Simian foamy virus type 1
GN=pol PE=1 SV=3
Length = 1149
Score = 45.8 bits (107), Expect = 1e-04
Identities = 35/143 (24%), Positives = 67/143 (46%)
Frame = -3
Query: 458 PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLH 279
P + +D+I LP + +G+ + +V+D + P + TS A + +
Sbjct: 871 PFDKFYIDYIGPLPPS-NGYLHVLVVVDSMTGFVWLYPTKAPSTS---ATVKALNMLTSI 926
Query: 278 GMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYIL 99
+P+ + SD+ FTS + + G L+FS+ +HPQ++GK E NS + LL ++
Sbjct: 927 AIPKVLHSDQGAAFTSSTFADWAKEKGIQLEFSTPYHPQSSGKVERKNSDIKRLLTKLLI 986
Query: 98 DHKTQGEKYHLWWNLPTITRCTL 30
+ W++L + + L
Sbjct: 987 GRPAK------WYDLLPVVQLAL 1003
>sp|Q09575|YRD6_CAEEL Uncharacterized protein K02A2.6
OS=Caenorhabditis elegans GN=K02A2.6 PE=2 SV=1
Length = 1268
Score = 44.7 bits (104), Expect = 3e-04
Identities = 37/134 (27%), Positives = 70/134 (52%), Gaps = 1/134 (0%)
Frame = -3
Query: 479 SPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLF 303
+P P P P + I +DF L + +V+D +K+A + +++++ L
Sbjct: 840 NPWPVPEAPWKRIHIDFAGPLNGCY-----LLVVVDAKTKYAE-VKLTRSISAVTTIDL- 892
Query: 302 VAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVL 123
+ +IF +HG PETI+SD + TS + + ++ G + S++++P++NG +E +
Sbjct: 893 LEEIFSIHGYPETIISDNGTQLTSHLFAQMCQSHGIEHKTSAVYYPRSNGAAE----RFV 948
Query: 122 DLLKSYILDHKTQG 81
D LK I K +G
Sbjct: 949 DTLKRGIAKIKGEG 962
>sp|P03356|POL_MLVAV Pol polyprotein OS=AKV murine leukemia virus
GN=pol PE=3 SV=2
Length = 1196
Score = 43.5 bits (101), Expect = 6e-04
Identities = 25/102 (24%), Positives = 51/102 (50%)
Frame = -3
Query: 404 GHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLHGMPETIVSDRDPRFTSLF 225
G+ + + +D FS P ++ T+ +++ + +IF GMP+ + SD P FTS
Sbjct: 926 GYKYLLVFVDTFSGWVEAFPTKRE-TARVVSKKLLEEIFPRFGMPQVLGSDNGPAFTSQV 984
Query: 224 WKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYIL 99
+++ + +G + + PQ++G+ E N + + L L
Sbjct: 985 SQSVADLLGIDWKLHCAYRPQSSGQVERMNRTIKETLTKLTL 1026
|
| Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912758|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_E09.
(511 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1 144 2e-35
tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subs... 145 4e-35
tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subs... 145 4e-35
tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein OSJNBa00... 145 4e-35
tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subs... 145 4e-35
tr|Q9ZPF9|Q9ZPF9_ARATH Putative polyprotein OS=Arabidopsis thali... 140 2e-34
tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 139 2e-34
tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa GN=... 140 3e-34
tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gy... 140 3e-34
tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gy... 138 4e-34
tr|Q93WG4|Q93WG4_ORYSA Putative retroelement OS=Oryza sativa GN=... 138 5e-34
tr|Q7XFI5|Q7XFI5_ORYSJ Retrotransposon protein, putative, Ty3-gy... 138 5e-34
tr|Q9SLQ0|Q9SLQ0_ORYSI Gag-pol polyprotein (Fragment) OS=Oryza s... 138 5e-34
tr|Q8L7J3|Q8L7J3_MAIZE Gag-pol polyprotein OS=Zea mays PE=4 SV=1 139 6e-34
tr|Q6UUJ1|Q6UUJ1_ORYSJ Putative gag-pol polyprotein (Putative po... 136 1e-33
tr|A5BLY2|A5BLY2_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-33
tr|B5G4Y0|B5G4Y0_TRIMO Putative gag-pol polyprotein OS=Triticum ... 136 5e-33
tr|Q94BM2|Q94BM2_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 135 8e-33
tr|Q94BM1|Q94BM1_HORVU Gag-pol polyprotein OS=Hordeum vulgare PE... 135 8e-33
tr|Q949K9|Q949K9_CICAR Putative polyprotein (Fragment) OS=Cicer ... 135 8e-33
tr|Q2MKJ9|Q2MKJ9_BAMGL Gag-pol polyprotein (Fragment) OS=Bambusa... 135 9e-33
tr|A5BGM7|A5BGM7_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-32
tr|Q6UUM9|Q6UUM9_ORYSJ Putative gag-pol polyprotein OS=Oryza sat... 137 2e-32
tr|A5APH5|A5APH5_VITVI Putative uncharacterized protein OS=Vitis... 141 2e-32
tr|A5BA10|A5BA10_VITVI Putative uncharacterized protein OS=Vitis... 134 7e-32
tr|A5BCY4|A5BCY4_VITVI Putative uncharacterized protein (Fragmen... 138 2e-31
tr|Q7XKZ2|Q7XKZ2_ORYSJ OSJNBa0022F16.12 protein OS=Oryza sativa ... 136 2e-31
tr|Q60ET2|Q60ET2_ORYSJ Putative polyprotein OS=Oryza sativa subs... 132 3e-31
tr|Q6VPE6|Q6VPE6_PETHY Putative integrase OS=Petunia hybrida PE=... 132 3e-31
tr|Q7XXG1|Q7XXG1_ORYSJ OSJNBb0089K24.9 protein OS=Oryza sativa s... 137 3e-31
>tr|Q9LQH2|Q9LQH2_ARATH F15O4.13 OS=Arabidopsis thaliana PE=4 SV=1
Length = 1887
Score = 144 bits (362), Expect(2) = 2e-35
Identities = 67/128 (52%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y+P P P P I+MDF+ LPRT++G D I++V+DRFSK AHFIP KT + H+A L
Sbjct: 1445 YTPLPIPSHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAIHIANL 1504
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F ++ RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 1505 FFREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTL 1564
Query: 125 LDLLKSYI 102
LL++ I
Sbjct: 1565 STLLRALI 1572
Score = 28.5 bits (62), Expect(2) = 2e-35
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTK 22
P VEFAYN++MHS++K
Sbjct: 1584 PHVEFAYNHSMHSASK 1599
>tr|Q0DJL7|Q0DJL7_ORYSJ Os05g0263200 protein OS=Oryza sativa subsp.
japonica GN=Os05g0263200 PE=4 SV=1
Length = 1820
Score = 145 bits (366), Expect(2) = 4e-35
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y+P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 1257 YTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 1316
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F ++I RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 1317 FFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTL 1376
Query: 125 LDLLKSYILDHKTQGEK 75
LL++ I + + E+
Sbjct: 1377 SMLLRALIKKNLKEWEE 1393
Score = 25.8 bits (55), Expect(2) = 4e-35
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 69 PLVEFAYNNTMHSST 25
P VEFAYN +HS+T
Sbjct: 1396 PHVEFAYNRAVHSTT 1410
>tr|A4K7M3|A4K7M3_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
japonica PE=4 SV=1
Length = 1713
Score = 145 bits (366), Expect(2) = 4e-35
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y+P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 1257 YTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 1316
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F ++I RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 1317 FFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTL 1376
Query: 125 LDLLKSYILDHKTQGEK 75
LL++ I + + E+
Sbjct: 1377 SMLLRALIKKNLKEWEE 1393
Score = 25.8 bits (55), Expect(2) = 4e-35
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 69 PLVEFAYNNTMHSST 25
P VEFAYN +HS+T
Sbjct: 1396 PHVEFAYNRAVHSTT 1410
>tr|Q6ATA5|Q6ATA5_ORYSJ Putative uncharacterized protein
OSJNBa0053F13.6 (Putative polyprotein) OS=Oryza sativa
subsp. japonica GN=OSJNBa0053F13.6 PE=4 SV=1
Length = 681
Score = 145 bits (366), Expect(2) = 4e-35
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y+P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 225 YTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 284
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F ++I RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 285 FFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTL 344
Query: 125 LDLLKSYILDHKTQGEK 75
LL++ I + + E+
Sbjct: 345 SMLLRALIKKNLKEWEE 361
Score = 25.8 bits (55), Expect(2) = 4e-35
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 69 PLVEFAYNNTMHSST 25
P VEFAYN +HS+T
Sbjct: 364 PHVEFAYNRAVHSTT 378
>tr|Q0J0N1|Q0J0N1_ORYSJ Os09g0491900 protein OS=Oryza sativa subsp.
japonica GN=Os09g0491900 PE=4 SV=1
Length = 681
Score = 145 bits (366), Expect(2) = 4e-35
Identities = 69/137 (50%), Positives = 96/137 (70%), Gaps = 1/137 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y+P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 225 YTPLPVPSAPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKSDDASHIASL 284
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F ++I RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 285 FFSEIVRLHGMPKTIVSDRDTKFLSYFWKTLWAKLGTRLLFSTTCHPQTDGQTEVVNRTL 344
Query: 125 LDLLKSYILDHKTQGEK 75
LL++ I + + E+
Sbjct: 345 SMLLRALIKKNLKEWEE 361
Score = 25.8 bits (55), Expect(2) = 4e-35
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = -2
Query: 69 PLVEFAYNNTMHSST 25
P VEFAYN +HS+T
Sbjct: 364 PHVEFAYNRAVHSTT 378
>tr|Q9ZPF9|Q9ZPF9_ARATH Putative polyprotein OS=Arabidopsis thaliana
GN=AT4g07850 PE=2 SV=1
Length = 1138
Score = 140 bits (354), Expect(2) = 2e-34
Identities = 66/127 (51%), Positives = 90/127 (70%), Gaps = 1/127 (0%)
Frame = -3
Query: 479 SPCPYP-PPRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLF 303
+P P P P I+MDF+ LPRT++G D I++V+DRFSK AHFIP KT + H+A LF
Sbjct: 821 TPLPIPLHPWNDISMDFVVGLPRTRTGKDSIFVVVDRFSKMAHFIPCHKTDDAMHIANLF 880
Query: 302 VAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVL 123
++ RLHGMP+TIVSDRD +F S FWK +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 881 FREVVRLHGMPKTIVSDRDTKFLSYFWKTLWSKLGTKLLFSTTCHPQTDGQTEVVNRTLS 940
Query: 122 DLLKSYI 102
LL++ I
Sbjct: 941 TLLRALI 947
Score = 28.5 bits (62), Expect(2) = 2e-34
Identities = 11/16 (68%), Positives = 15/16 (93%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTK 22
P VEFAYN+++HS+TK
Sbjct: 959 PHVEFAYNHSVHSATK 974
>tr|Q6UUF6|Q6UUF6_ORYSJ Putative gag-pol polyprotein OS=Oryza sativa
subsp. japonica GN=OSJNBa0038J12.13 PE=4 SV=1
Length = 1619
Score = 139 bits (350), Expect(2) = 2e-34
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 1178 YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADL 1237
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F +I RLHG+P TIVSDRD +F S FW+ +W +GT L FS+ HPQT+G++E+ N V
Sbjct: 1238 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTV 1297
Query: 125 LDLLKSYI 102
+L++ +
Sbjct: 1298 STMLRAVL 1305
Score = 29.6 bits (65), Expect(2) = 2e-34
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTKK 19
P VEFAYN + HS+TKK
Sbjct: 1317 PHVEFAYNRSQHSTTKK 1333
>tr|Q94I07|Q94I07_ORYSA Putative retroelement OS=Oryza sativa
GN=OSJNBa0034E23.18 PE=4 SV=1
Length = 2447
Score = 140 bits (352), Expect(3) = 3e-34
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP KT + H+A L
Sbjct: 1254 YMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADL 1313
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F +I RLHG+P TIVSDRD +F S FW+ +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 1314 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTL 1373
Query: 125 LDLLKSYI 102
+L++ +
Sbjct: 1374 STMLRAVL 1381
Score = 28.1 bits (61), Expect(3) = 3e-34
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTK 22
P +EFAYN ++HS+TK
Sbjct: 1393 PHIEFAYNRSLHSTTK 1408
Score = 20.8 bits (42), Expect(3) = 3e-34
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 489 GLLQPLPIPT 460
GL PLP+PT
Sbjct: 1252 GLYMPLPVPT 1261
Score = 127 bits (320), Expect(3) = 2e-28
Identities = 59/119 (49%), Positives = 85/119 (71%)
Frame = -3
Query: 452 ESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLHGM 273
+ I MDFI LP+TQ G+D IW+V+DR +K A FIP + T + LA L+ A+I LHG+
Sbjct: 2087 DEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGV 2146
Query: 272 PETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYILD 96
P+ IVSDR+ +FTS FWK + E +GT L FS+ +HPQT+G++E N ++ D+L + +LD
Sbjct: 2147 PKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLD 2205
Score = 21.2 bits (43), Expect(3) = 2e-28
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 78 KVSPLVEFAYNNTMHSS 28
K P EF+YNN+ +S
Sbjct: 2212 KSLPYAEFSYNNSYQAS 2228
Score = 20.4 bits (41), Expect(3) = 2e-28
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 507 DRDKAQGLLQPLPIP 463
+ + GLLQPL +P
Sbjct: 2068 EHQRPAGLLQPLQVP 2082
>tr|Q7XG23|Q7XG23_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os10g16560 PE=4 SV=1
Length = 2447
Score = 140 bits (352), Expect(3) = 3e-34
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP KT + H+A L
Sbjct: 1254 YMPLPVPTVPWEDISMDFVLGLPRTKRGRDSIFVVVDRFSKMAHFIPCHKTDDASHIADL 1313
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F +I RLHG+P TIVSDRD +F S FW+ +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 1314 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTL 1373
Query: 125 LDLLKSYI 102
+L++ +
Sbjct: 1374 STMLRAVL 1381
Score = 28.1 bits (61), Expect(3) = 3e-34
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTK 22
P +EFAYN ++HS+TK
Sbjct: 1393 PHIEFAYNRSLHSTTK 1408
Score = 20.8 bits (42), Expect(3) = 3e-34
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 489 GLLQPLPIPT 460
GL PLP+PT
Sbjct: 1252 GLYMPLPVPT 1261
Score = 127 bits (320), Expect(3) = 2e-28
Identities = 59/119 (49%), Positives = 85/119 (71%)
Frame = -3
Query: 452 ESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARLFVAQIFRLHGM 273
+ I MDFI LP+TQ G+D IW+V+DR +K A FIP + T + LA L+ A+I LHG+
Sbjct: 2087 DEIGMDFITGLPKTQGGYDSIWVVVDRLTKVARFIPVKTTYGGNKLAELYFARIVSLHGV 2146
Query: 272 PETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMVLDLLKSYILD 96
P+ IVSDR+ +FTS FWK + E +GT L FS+ +HPQT+G++E N ++ D+L + +LD
Sbjct: 2147 PKKIVSDRESQFTSHFWKKLQEELGTRLNFSTAYHPQTDGQTERLNQILEDMLHACVLD 2205
Score = 21.2 bits (43), Expect(3) = 2e-28
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 78 KVSPLVEFAYNNTMHSS 28
K P EF+YNN+ +S
Sbjct: 2212 KSLPYAEFSYNNSYQAS 2228
Score = 20.4 bits (41), Expect(3) = 2e-28
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = -2
Query: 507 DRDKAQGLLQPLPIP 463
+ + GLLQPL +P
Sbjct: 2068 EHQRPAGLLQPLQVP 2082
>tr|Q10IG2|Q10IG2_ORYSJ Retrotransposon protein, putative, Ty3-gypsy
subclass OS=Oryza sativa subsp. japonica
GN=LOC_Os03g35326 PE=4 SV=1
Length = 889
Score = 138 bits (347), Expect(2) = 4e-34
Identities = 64/128 (50%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Frame = -3
Query: 482 YSPCPYPP-PRESIAMDFIFDLPRTQSGHDGIWIVIDRFSKHAHFIPDEKTVTSDHLARL 306
Y P P P P E I+MDF+ LPRT+ G D I++V+DRFSK AHFIP K+ + H+A L
Sbjct: 595 YMPLPVPSVPWEDISMDFVLGLPRTKKGRDSIFVVVDRFSKMAHFIPCHKSDDATHVADL 654
Query: 305 FVAQIFRLHGMPETIVSDRDPRFTSLFWKAIWENIGTWLQFSSLFHPQTNGKSEIANSMV 126
F +I RLHG+P TIVSDRD +F S FW+ +W +GT L FS+ HPQT+G++E+ N +
Sbjct: 655 FFREIVRLHGVPNTIVSDRDTKFLSHFWRTLWAKLGTKLLFSTTCHPQTDGQTEVVNRTL 714
Query: 125 LDLLKSYI 102
+L++ +
Sbjct: 715 STMLRAVL 722
Score = 30.0 bits (66), Expect(2) = 4e-34
Identities = 12/17 (70%), Positives = 15/17 (88%)
Frame = -2
Query: 69 PLVEFAYNNTMHSSTKK 19
P VEFAYN++ HS+TKK
Sbjct: 734 PHVEFAYNHSQHSTTKK 750
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