BP912760 [AcEST]

BP912760
Clone id	YMU001_000022_E11
Library	YMU01
Length	589
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000022_E11.
Accession	BP912760
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	ATACCTTGTTGCTCCGGTCACCGATGACGCACTGTAACACACGGCTCGAAGTCCATCACC TTGGCTATCTTCAGAAATATAAAACTTTAGCATTTCTAATCTTAGACCCCTAAGTTGACC TAGTTGCCCTTCTCACATGCACCCACAATCACCTTCTAAGTTGAGACCGCTCGCTTCGGA TGCTCATAACTCATGATGTATAAGTCCGATTCACAAGCTATAAAGCACGGCTAAAAACAC TTATTAAAAACCATATTTTGGAGTCTCGAACAACCCAAAACATCAACATTCAAGCTTGAC AAAATCACACCTTCGTACATGAATTTTTACAAGGCCACTTCCAAAACTTGCAGGGCTATG TACACATATATACATGAGGCTAGTGGGCAAGATTTTTGGCATGACCTAGTGACTTTATGC TTATCCAAACAATGCATGATATAGCTTGCCAACCCCCCTTGCCTGCTTAGTCATTCATGA CAAGTAGAGGTTCCTAGGGTGAACAACTGCTTCATTTCATCCCCAGAAACCTCATTTACA TCCTCAAATGTCTCAACATTGTCTCCTTCTATTGATAGCATTTCATCAG
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q4JF29
Definition	sp\|Q4JF29\|TCAM1_BOVIN TIR domain-containing adapter molecule 1 OS=Bos taurus
Align length	49
Score (bit)	30.0
E-value	9.0
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912760\|Adiantum capillus-veneris mRNA, clone: YMU001_000022_E11. (589 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q4JF29\|TCAM1_BOVIN TIR domain-containing adapter molecule 1 O... 30 9.0 >sp\|Q4JF29\|TCAM1_BOVIN TIR domain-containing adapter molecule 1 OS=Bos taurus GN=TICAM1 PE=2 SV=2 Length = 759 Score = 30.0 bits (66), Expect = 9.0 Identities = 16/49 (32%), Positives = 24/49 (48%) Frame = +2 Query: 47 RSPSPWLSSEINFSISNLRPLSPSCPSHMHPQSPSKLRPLASDAHNS 193 R P+P + +F ++ P PS P HP +PSK P AH++ Sbjct: 345 RPPTPSVPQTSPSFPSASTSPFPSPSTPPEAHP-TPSKAHPTPPKAHST 392
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	A9T0P6
Definition	tr\|A9T0P6\|A9T0P6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length	67
Score (bit)	34.7
E-value	4.1
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912760\|Adiantum capillus-veneris mRNA, clone: YMU001_000022_E11. (589 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tr\|A9T0P6\|A9T0P6_PHYPA Predicted protein OS=Physcomitrella paten... 35 4.1 >tr\|A9T0P6\|A9T0P6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_234615 PE=4 SV=1 Length = 995 Score = 34.7 bits (78), Expect = 4.1 Identities = 25/67 (37%), Positives = 35/67 (52%) Frame = +2 Query: 41 TARSPSPWLSSEINFSISNLRPLSPSCPSHMHPQSPSKLRPLASDAHNSCISPIHKL 220 T + P LSS+ SNL+ + S PS + PQSP+KL P AS A S ++P+ L Sbjct: 798 TTNASRPALSSQT---ETSNLKFKT--SKPSSITPQSPAKLTPAASPAKRSSKVAPLRNL 852 Query: 221 STAKNT 241 K + Sbjct: 853 PKATKES 859