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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912765
Clone id YMU001_000022_F04
Library
Length 568
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_F04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TTTTTTTTTTTTTTTAAGAGACGAATCACGTCCGTGTATCAGTCTAAGCCGCCACTTCCT
ACCCCTCCTTCTTCTCTATCCCGTAAGACTATTCTTTGAGTACCGCATTGGGGCGAGACC
CAATATCTTCTTTGCCGCCCCACCCTTGGTTTGGAGAGGGGAAAATAGAAAAGGTGGGAC
TTACGACCTTACCTATCTATGGAAACTCCATAGAATGATAAGAGAGACTCTTAGTAGTCA
ACAATCCCAGGATTTACATTCCATTTTTACGGATTGGTACTAGGGAATATTAAATTTCCC
AAGGATTTCCTTTTCTTTTGATAGATTTAGCTTCGGGGGACACCGAAGCAACAGGACCCA
CCCGCATCTCGATATGAAGATCGGTTTCGTCGCCACTTAGTTCGGAGGGGCAAGGAGATT
GACCAAATCAAACTTTCCCGCCCGGGTTCTTTTTGCTTTCTCTTGGTGGAAAGCAAGGGG
TCGGGAGACTTATTCCGGAAATGCAAGACGACTTTTGTTCCGGACGCCTTGCGAGGATTC
GAACCTCCGTCCGTATTACGCATCACTC
■■Homology search results ■■ -
sp_hit_id Q9ASY9
Definition sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana
Align length 46
Score (bit) 32.7
E-value 1.2
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912765|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F04.
         (553 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara...    33   1.2  
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m...    31   4.6  
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O...    30   6.0  
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ...    30   6.0  
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma...    30   6.0  
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s...    30   7.8  
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin...    30   7.9  

>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
           OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
          Length = 221

 Score = 32.7 bits (73), Expect = 1.2
 Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -1

Query: 382 SGDETDLHIEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 248
           SG+ +D+  E+ +G +AS++ E +  KR+G+ W++ +S +VP R N
Sbjct: 69  SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112


>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
           PE=2 SV=1
          Length = 860

 Score = 30.8 bits (68), Expect = 4.6
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 340 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 510
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +  
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390

Query: 511 A 513
           A
Sbjct: 391 A 391


>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
           OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
           NRRL 181) GN=NFIA_058290 PE=3 SV=1
          Length = 527

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 13/56 (23%), Positives = 29/56 (51%)
 Frame = -1

Query: 457 FPPRESKKNPGGKV*FGQSPCPSELSGDETDLHIEMRVGPVASVSPEAKSIKRKGN 290
           FPP+ ++ +PGG     + P P ++  ++ DL        +  ++ +++  KRK +
Sbjct: 38  FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAKRKAD 93


>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
           GN=mtbp PE=2 SV=2
          Length = 867

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
 Frame = +1

Query: 340 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 510
           +PPA  R   ++R ++ R+ K+I    +   G +C  + L++ KGSG     CK T +  
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394

Query: 511 A 513
           A
Sbjct: 395 A 395


>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus
           marinus (strain MIT 9215) GN=cobQ PE=3 SV=2
          Length = 509

 Score = 30.4 bits (67), Expect = 6.0
 Identities = 27/85 (31%), Positives = 37/85 (43%)
 Frame = +2

Query: 107 NIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 286
           N  F    L W  EN KGGT   TY   +H +      S + Q ++ I       ILN  
Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479

Query: 287 RISFSFDRFSFGGHRSNRTHPHLDM 361
            IS+   R S   + +N  H HL++
Sbjct: 480 SISYKKKRESIIDNLANEFHKHLNL 504


>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
           sapiens GN=C14orf43 PE=1 SV=2
          Length = 1045

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
 Frame = -3

Query: 545 RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 384
           ++  G    RK   AS TK  + F     +P L+TKR +++ G   LI  +S+P+RT
Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535


>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
           protein YALI0D16379g OS=Yarrowia lipolytica
           GN=YALI0D16379g PE=3 SV=1
          Length = 818

 Score = 30.0 bits (66), Expect = 7.9
 Identities = 16/38 (42%), Positives = 23/38 (60%)
 Frame = +2

Query: 137 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 250
           WR EN K G YD   + KL +M+R+     Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328
tr_hit_id Q7UIE7
Definition tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica
Align length 41
Score (bit) 35.4
E-value 2.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912765|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F04.
         (553 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo...    35   2.0  
tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper...    35   2.0  
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop...    35   3.5  
tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein OSJNBa00...    33   10.0 
tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subs...    33   10.0 
tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza...    33   10.0 

>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
          Length = 174

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -3

Query: 491 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 369
           L  RN+SP+PLL T  + K   R  + W+    +R  WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173


>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
           OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
          Length = 577

 Score = 35.4 bits (80), Expect = 2.0
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
 Frame = +2

Query: 95  GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 274
           G+RP + FA  P+  +G N  G  Y L Y W+L   +  + +     D+  I+  W  G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226

Query: 275 ----LNFPRI 292
               +  PR+
Sbjct: 227 TVYTITIPRL 236


>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
           OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
          Length = 1857

 Score = 34.7 bits (78), Expect = 3.5
 Identities = 16/33 (48%), Positives = 19/33 (57%)
 Frame = -1

Query: 490 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 392
           C+ G S PTPC P    +  PGG+   G SPCP
Sbjct: 52  CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83


>tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein
           OSJNBa0015N08.25 OS=Oryza sativa subsp. japonica
           GN=OSJNBa0015N08.25 PE=4 SV=1
          Length = 289

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = -3

Query: 521 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 360
           PRK  G K     R     + P P    K+K+  KEP RE      S P+ T  ++N+ +
Sbjct: 89  PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 359 YRDAGGS 339
            RD GG+
Sbjct: 147 KRDTGGA 153


>tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subsp.
           japonica GN=Os03g0852300 PE=2 SV=1
          Length = 303

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = -3

Query: 521 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 360
           PRK  G K     R     + P P    K+K+  KEP RE      S P+ T  ++N+ +
Sbjct: 89  PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 359 YRDAGGS 339
            RD GG+
Sbjct: 147 KRDTGGA 153


>tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_012817 PE=4 SV=1
          Length = 227

 Score = 33.1 bits (74), Expect = 10.0
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
 Frame = -3

Query: 521 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 360
           PRK  G K     R     + P P    K+K+  KEP RE      S P+ T  ++N+ +
Sbjct: 89  PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146

Query: 359 YRDAGGS 339
            RD GG+
Sbjct: 147 KRDTGGA 153