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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912767
Clone id YMU001_000022_F06
Library
Length 528
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_F06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTTTTTTTTTTTCATAGGGTTTGTTCCTACCTCTCCTTATTTACAAGATCCAAATGTGT
CAAAATCATAGCTATGTACAAAATTTGAACATAGATTTAATGCATCTGGTCCCTCCTCCA
CAAAGCCTTGAAGCCTTTCCATCAGGTGCATACCAAGAGAGAGGTGGTCCAAAATTTGAA
AAGTGGCCCTCACAAGAATAGGCTTCTTGAGGCGTTTTCCCTTTCAAAGCCTTTGTGTAG
CTTTGATTGAGAATGTACATTGTTGTACTTATTGATTCGGCCCAAAAGGAATCTGGCATA
CCCTTGGATTTGAGCATACACCTTGCCATTGCTACCACCGTCCAACAGAGAAATAGCCAC
ACCAACGACAGCTAATTGATCTTGGAGGTCCTTAATCCGCTCGATAAAGGCCTACACCTT
CTCTTGTCATCAAGTTTCTTATTAGTTAGTTGATTTTCCAGATTTTGAATTCTAGTGTTA
TTGTACGCCTCATATTGGCGAGCCAATATGTTCCAAGCTTCATGTGCT
■■Homology search results ■■ -
sp_hit_id P10978
Definition sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum
Align length 85
Score (bit) 42.4
E-value 0.001
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912767|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F06.
         (515 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from tra...    42   0.001
sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like At3g0...    34   0.46 
sp|P92512|M710_ARATH Uncharacterized mitochondrial protein AtMg0...    33   1.0  
sp|Q6BM25|SSN3_DEBHA Serine/threonine-protein kinase SSN3 OS=Deb...    32   1.3  
sp|P37226|MDH_PHOPR Malate dehydrogenase OS=Photobacterium profu...    31   3.0  
sp|A1JIV0|MDH_YERE8 Malate dehydrogenase OS=Yersinia enterocolit...    30   5.1  
sp|Q7MYW9|MDH_PHOLL Malate dehydrogenase OS=Photorhabdus lumines...    30   5.1  
sp|P67223|Y1945_MYCBO UPF0098 protein Mb1945c OS=Mycobacterium b...    30   6.7  
sp|P67222|Y1910_MYCTU UPF0098 protein Rv1910c/MT1961 OS=Mycobact...    30   6.7  
sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes ...    30   6.7  
sp|Q9Y5G2|PCDGE_HUMAN Protocadherin gamma-B2 OS=Homo sapiens GN=...    30   6.7  
sp|P0C7R5|MDH_YERPS Malate dehydrogenase OS=Yersinia pseudotuber...    30   6.7  
sp|A4TRK3|MDH_YERPP Malate dehydrogenase OS=Yersinia pestis (str...    30   6.7  
sp|Q1CEJ3|MDH_YERPN Malate dehydrogenase OS=Yersinia pestis bv. ...    30   6.7  
sp|P61892|MDH_YERPE Malate dehydrogenase OS=Yersinia pestis GN=m...    30   6.7  
sp|B2K2N5|MDH_YERPB Malate dehydrogenase OS=Yersinia pseudotuber...    30   6.7  
sp|Q1CBY7|MDH_YERPA Malate dehydrogenase OS=Yersinia pestis bv. ...    30   6.7  
sp|A7FMU2|MDH_YERP3 Malate dehydrogenase OS=Yersinia pseudotuber...    30   6.7  
sp|P26664|POLG_HCV1 Genome polyprotein OS=Hepatitis C virus geno...    30   8.7  

>sp|P10978|POLX_TOBAC Retrovirus-related Pol polyprotein from
           transposon TNT 1-94 OS=Nicotiana tabacum PE=2 SV=1
          Length = 1328

 Score = 42.4 bits (98), Expect = 0.001
 Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 4/85 (4%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T+V   R ML+   +P SFW E++ T  Y++N+S +  L  + P+  ++ +     H   
Sbjct: 591 TIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKV 650

Query: 160 FGPPLSWYAPDGKASRLCGGGTRCI 86
           FG     + P  + ++L      CI
Sbjct: 651 FGCRAFAHVPKEQRTKLDDKSIPCI 675


>sp|Q9SFU0|SC24A_ARATH Protein transport protein Sec24-like
           At3g07100 OS=Arabidopsis thaliana GN=At3g07100 PE=1 SV=2
          Length = 1038

 Score = 33.9 bits (76), Expect = 0.46
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +3

Query: 99  PPPQSLEAFPSGAYQERGGPKFEKWPS 179
           PPP S  +FPS AY   GG  F+++PS
Sbjct: 89  PPPPSSNSFPSPAYGPPGGAPFQRFPS 115


>sp|P92512|M710_ARATH Uncharacterized mitochondrial protein
           AtMg00710 OS=Arabidopsis thaliana GN=AtMg00710 PE=4 SV=1
          Length = 120

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 14/48 (29%), Positives = 28/48 (58%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAY 185
           T++   R ML   G+P +F A++ +T ++I+N+  + A+    P E +
Sbjct: 4   TIIEKVRSMLCECGLPKTFRADAANTAVHIINKYPSTAINFHVPDEVW 51


>sp|Q6BM25|SSN3_DEBHA Serine/threonine-protein kinase SSN3
           OS=Debaryomyces hansenii GN=SSN3 PE=3 SV=2
          Length = 472

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 3/76 (3%)
 Frame = -2

Query: 304 MLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSC-EGHFSNFGPP--LSWYA 134
           M   K +P  F    +   + +L    TK     T    YS  + HFSN  PP  +SWY 
Sbjct: 325 MNNKKSVP--FQKNQLQKIVEVLGTPTTKNWPTITKYPEYSAFQQHFSNTYPPNLISWYK 382

Query: 133 PDGKASRLCGGGTRCI 86
             G+ S+ C    RC+
Sbjct: 383 LIGRTSKQCLNLLRCL 398


>sp|P37226|MDH_PHOPR Malate dehydrogenase OS=Photobacterium
           profundum GN=mdh PE=3 SV=2
          Length = 312

 Score = 31.2 bits (69), Expect = 3.0
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQE 191
           T VA+A  +LK  G+ D      I+T   I ++++   LKGKTP +
Sbjct: 123 TTVAIAADVLKKAGVYDKRRLFGITTLDIIRSETFVAELKGKTPSD 168


>sp|A1JIV0|MDH_YERE8 Malate dehydrogenase OS=Yersinia enterocolitica
           serotype O:8 / biotype 1B (strain 8081) GN=mdh PE=3 SV=1
          Length = 311

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 25/89 (28%), Positives = 39/89 (43%)
 Frame = -2

Query: 457 IQNLENQLTNKKLDDKRRCRPLSSGLRTSKIN*LSLVWLFLCWTVVAMARCMLKSKGMPD 278
           ++NL  Q+        R C     G+ T+ +N           T VA+A  +LK  G+ D
Sbjct: 98  VRNLVEQIA-------RTCPKALIGIITNPVN-----------TTVAIAAEVLKKAGVYD 139

Query: 277 SFWAESISTTMYILNQSYTKALKGKTPQE 191
                 I+T   I + ++   LKGK PQ+
Sbjct: 140 KNKLFGITTLDTIRSNTFVAELKGKQPQD 168


>sp|Q7MYW9|MDH_PHOLL Malate dehydrogenase OS=Photorhabdus
           luminescens subsp. laumondii GN=mdh PE=3 SV=1
          Length = 312

 Score = 30.4 bits (67), Expect = 5.1
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQE 191
           T VA+A  +LK  G+ D      ++T   I + ++   LKGK PQE
Sbjct: 123 TTVAIAAEVLKKAGVYDKNRLFGVTTLDVIRSNTFVAELKGKKPQE 168


>sp|P67223|Y1945_MYCBO UPF0098 protein Mb1945c OS=Mycobacterium
           bovis GN=Mb1945c PE=3 SV=1
          Length = 201

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 193 EAYSCEGHFSNFGPPLSWYAPDGKA 119
           E Y+C+G  +N  PPL+W AP G A
Sbjct: 75  EQYTCKG--ANIAPPLTWSAPFGGA 97


>sp|P67222|Y1910_MYCTU UPF0098 protein Rv1910c/MT1961
           OS=Mycobacterium tuberculosis GN=Rv1910c PE=3 SV=1
          Length = 201

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = -2

Query: 193 EAYSCEGHFSNFGPPLSWYAPDGKA 119
           E Y+C+G  +N  PPL+W AP G A
Sbjct: 75  EQYTCKG--ANIAPPLTWSAPFGGA 97


>sp|Q5DRA9|PCDGE_PANTR Protocadherin gamma-B2 OS=Pan troglodytes
           GN=PCDHGB2 PE=3 SV=1
          Length = 931

 Score = 30.0 bits (66), Expect = 6.7
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
 Frame = -1

Query: 350 GVAISLL-----DGGSNGKVYAQIQGYARFLLGRINK 255
           G  I+L+     D G NG+VY Q+ G A+F+L   +K
Sbjct: 363 GTVIALIKTRDRDSGENGEVYCQVLGNAKFILKSSSK 399
tr_hit_id Q9SXB2
Definition tr|Q9SXB2|Q9SXB2_ARATH T28P6.8 protein OS=Arabidopsis thaliana
Align length 77
Score (bit) 68.9
E-value 1.0e-10
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912767|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F06.
         (515 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9SXB2|Q9SXB2_ARATH T28P6.8 protein OS=Arabidopsis thaliana G...    69   1e-10
tr|Q9SFE1|Q9SFE1_ARATH T26F17.17 OS=Arabidopsis thaliana PE=4 SV=1     69   1e-10
tr|Q9M2D1|Q9M2D1_ARATH Copia-type polyprotein OS=Arabidopsis tha...    69   1e-10
tr|Q9C739|Q9C739_ARATH Copia-type polyprotein, putative OS=Arabi...    69   1e-10
tr|Q9C536|Q9C536_ARATH Copia-type polyprotein, putative OS=Arabi...    69   1e-10
tr|B8LKX7|B8LKX7_PICSI Putative uncharacterized protein OS=Picea...    68   2e-10
tr|Q9M197|Q9M197_ARATH Copia-type reverse transcriptase-like pro...    68   3e-10
tr|A5B0R8|A5B0R8_VITVI Putative uncharacterized protein OS=Vitis...    67   7e-10
tr|Q6AUP9|Q6AUP9_ORYSJ Putative polyprotein OS=Oryza sativa subs...    65   2e-09
tr|Q75M81|Q75M81_ORYSJ Putative integrase (Retrotransposon prote...    65   3e-09
tr|Q94HQ0|Q94HQ0_ORYSA Putative retroelement OS=Oryza sativa GN=...    64   3e-09
tr|Q7XFV5|Q7XFV5_ORYSJ Retrotransposon protein, putative, Ty1-co...    64   3e-09
tr|Q0J0Z8|Q0J0Z8_ORYSJ Os09g0473900 protein OS=Oryza sativa subs...    64   3e-09
tr|Q0DEJ1|Q0DEJ1_ORYSJ Os06g0149600 protein OS=Oryza sativa subs...    64   3e-09
tr|Q53LP5|Q53LP5_ORYSJ Os11g0199800 protein OS=Oryza sativa subs...    64   4e-09
tr|Q0E3N6|Q0E3N6_ORYSJ Os02g0163800 protein OS=Oryza sativa subs...    64   4e-09
tr|A5C546|A5C546_VITVI Putative uncharacterized protein OS=Vitis...    64   4e-09
tr|A5BLB0|A5BLB0_VITVI Putative uncharacterized protein OS=Vitis...    64   4e-09
tr|Q9AY40|Q9AY40_ORYSA Putative gag-pol polyprotein OS=Oryza sat...    63   8e-09
tr|Q8W3A4|Q8W3A4_ORYSA Putative gag-pol polyprotein OS=Oryza sat...    63   8e-09
tr|Q8H8D2|Q8H8D2_ORYSJ Putative gag-pol polyprotein OS=Oryza sat...    63   8e-09
tr|Q7Y141|Q7Y141_ORYSJ Putative polyprotein (Retrotransposon pro...    63   8e-09
tr|Q7XQG8|Q7XQG8_ORYSJ OJ000114_01.9 protein OS=Oryza sativa sub...    63   8e-09
tr|Q7XM06|Q7XM06_ORYSJ OSJNBa0086O06.3 protein OS=Oryza sativa s...    63   8e-09
tr|Q7X8G8|Q7X8G8_ORYSA OSJNBb0016D16.22 protein OS=Oryza sativa ...    63   8e-09
tr|Q6I5H9|Q6I5H9_ORYSJ Putative polyprotein OS=Oryza sativa subs...    63   8e-09
tr|Q2QXM6|Q2QXM6_ORYSJ Retrotransposon protein, putative, unclas...    63   8e-09
tr|Q2QWI2|Q2QWI2_ORYSJ Retrotransposon protein, putative, unclas...    63   8e-09
tr|Q2QLK1|Q2QLK1_ORYSJ Retrotransposon protein, putative, unclas...    63   8e-09
tr|Q10KL1|Q10KL1_ORYSJ Retrotransposon protein, putative, unclas...    63   8e-09

>tr|Q9SXB2|Q9SXB2_ARATH T28P6.8 protein OS=Arabidopsis thaliana
           GN=T28P6.8 PE=4 SV=1
          Length = 1352

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K S+L
Sbjct: 697 FGSIAHAHVPDEKRSKL 713


>tr|Q9SFE1|Q9SFE1_ARATH T26F17.17 OS=Arabidopsis thaliana PE=4 SV=1
          Length = 1291

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 576 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 635

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K S+L
Sbjct: 636 FGSIAHAHVPDEKRSKL 652


>tr|Q9M2D1|Q9M2D1_ARATH Copia-type polyprotein OS=Arabidopsis
           thaliana GN=T20K12.230 PE=4 SV=1
          Length = 1352

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K S+L
Sbjct: 697 FGSIAHAHVPDEKRSKL 713


>tr|Q9C739|Q9C739_ARATH Copia-type polyprotein, putative
           OS=Arabidopsis thaliana GN=F11I4_21 PE=4 SV=1
          Length = 1352

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRV 696

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K S+L
Sbjct: 697 FGSIAHAHVPDEKRSKL 713


>tr|Q9C536|Q9C536_ARATH Copia-type polyprotein, putative
           OS=Arabidopsis thaliana GN=T18I24.5 PE=4 SV=1
          Length = 1320

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/77 (45%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K S+L
Sbjct: 697 FGSIAHAHVPDEKRSKL 713


>tr|B8LKX7|B8LKX7_PICSI Putative uncharacterized protein OS=Picea
           sitchensis PE=2 SV=1
          Length = 407

 Score = 68.2 bits (165), Expect = 2e-10
 Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYS----CEGHFSN 161
           T++ MARCML ++ M   FWAE+I+T  YI+N++ T A+K KTP+EA+S       HF  
Sbjct: 244 TLMEMARCMLHARNMDPKFWAEAINTATYIVNRTPTIAVKHKTPEEAWSRRKPTVSHFKV 303

Query: 160 FGPPLSWYAPDGKASRLCGGGTRCI 86
           FG  +  + PD K  +L     +CI
Sbjct: 304 FGCDVYVHIPDEKRKKLDRKSHKCI 328


>tr|Q9M197|Q9M197_ARATH Copia-type reverse transcriptase-like
           protein OS=Arabidopsis thaliana GN=T16L24.270 PE=4 SV=1
          Length = 1272

 Score = 67.8 bits (164), Expect = 3e-10
 Identities = 34/77 (44%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCE----GHFSN 161
           T++ MAR MLKSK +P   WAE+++  +Y+LN+S TK++ GKTPQEA+S       H   
Sbjct: 637 TILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRV 696

Query: 160 FGPPLSWYAPDGKASRL 110
           FG     + PD K ++L
Sbjct: 697 FGSIAHAHVPDEKRNKL 713


>tr|A5B0R8|A5B0R8_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_013540 PE=4 SV=1
          Length = 894

 Score = 66.6 bits (161), Expect = 7e-10
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAY----SCEGHFSN 161
           TV+ MARC+L  K MP +FWAE+++T++Y+LN+  TK+LK KTP E +        H   
Sbjct: 200 TVMEMARCLLFEKKMPSNFWAEAVNTSVYLLNRLPTKSLKNKTPYEEWYGVKPFVNHLKI 259

Query: 160 FGPPLSWYAPDGKASRL 110
           FG    ++ P+ K S+L
Sbjct: 260 FGSICYYHVPEPKRSKL 276


>tr|Q6AUP9|Q6AUP9_ORYSJ Putative polyprotein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0007A06.5 PE=4 SV=1
          Length = 1248

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 32/53 (60%), Positives = 39/53 (73%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAYSCEGH 170
           TVV MAR +LK +GMP  FW E++ T +YILN+S TKAL GKTP EA+   GH
Sbjct: 465 TVVGMARALLKHRGMPAIFWGEAVVTAVYILNRSPTKALDGKTPYEAW--HGH 515


>tr|Q75M81|Q75M81_ORYSJ Putative integrase (Retrotransposon protein,
           putative, Ty1-copia subclass) OS=Oryza sativa subsp.
           japonica GN=OSJNBa0011H24.4 PE=4 SV=1
          Length = 1094

 Score = 64.7 bits (156), Expect = 3e-09
 Identities = 28/48 (58%), Positives = 39/48 (81%)
 Frame = -2

Query: 328 TVVAMARCMLKSKGMPDSFWAESISTTMYILNQSYTKALKGKTPQEAY 185
           TV+AMARCM+K+K MP  FW E+++T ++ILN+S TKA+  KTP EA+
Sbjct: 516 TVMAMARCMMKAKQMPGKFWGEAVTTAVFILNRSPTKAVPDKTPYEAW 563