BP912768 |
Clone id |
YMU001_000022_F07 |
Library |
YMU01 |
Length |
554 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000022_F07. |
Accession |
BP912768 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
AGAGAAGCTGTTGAGAGTTGTCAAACAACCAGTCACCAAGCATTTGCCAGTTGGAGCACG TCGAATTGGGCTGTCATATAGTGCTCCTAAAGTGATTAAGCTGCATGATTATGTTGCAGC AATCGGGTTGAAAAGCAAGATGGTGTTTGTGGTGGGGGCCATGGCTCATGGAAAGATAGA AGCAGATTATATTGAGGATTTGATAGCTGTGTCGGAATATCCTCTAAGTGCTGCTTGCTG CATTGGTCGCATCTGCAACGCTATTGAACAACAATTCAAGATACTGTAGCAGGAGCTTTT ATGAGGTTACTTCTGCTCAGAGGAAAGATCATAGTGGTTCTTATTCTTTGCTTTTCTCTG GTGAGAATGCTCGTTGTTTCTTCGCACGTTCCAGTTTTTCCCTTGTAAAGTTAAAGCTGA TCCTTTTTGTATGAGCAAGCAAAATAGAAAGTTCTTTGACCTATTAAGTGCTAGTGGACA TTAGACATATTTTTAGCTTCCAAATCCACCAAAAGGAGAAATCGGTTTCTGCTAATGTCC TAGTAGAACTGGTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q92979 |
Definition |
sp|Q92979|NEP1_HUMAN Probable ribosome biogenesis protein NEP1 OS=Homo sapiens |
Align length |
95 |
Score (bit) |
83.2 |
E-value |
8.0e-16 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9NNK1 |
Definition |
tr|A9NNK1|A9NNK1_PICSI Putative uncharacterized protein OS=Picea sitchensis |
Align length |
95 |
Score (bit) |
155.0 |
E-value |
1.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912768|Adiantum capillus-veneris mRNA, clone: YMU001_000022_F07. (554 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9NNK1|A9NNK1_PICSI Putative uncharacterized protein OS=Picea... 155 1e-36 tr|A4RQL1|A4RQL1_OSTLU Predicted protein OS=Ostreococcus lucimar... 125 2e-27 tr|Q00SI6|Q00SI6_OSTTA Putative nucleolar essential protein (ISS... 124 3e-27 tr|B6T8Z1|B6T8Z1_MAIZE Ribosome biogenesis protein NEP1 OS=Zea m... 122 1e-26 tr|Q6K882|Q6K882_ORYSJ Os02g0290400 protein OS=Oryza sativa subs... 120 4e-26 tr|B8AFV1|B8AFV1_ORYSI Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|A3A5Q2|A3A5Q2_ORYSJ Putative uncharacterized protein OS=Oryza... 120 4e-26 tr|B7FLL0|B7FLL0_MEDTR Putative uncharacterized protein OS=Medic... 117 4e-25 tr|A7QAF5|A7QAF5_VITVI Chromosome undetermined scaffold_71, whol... 113 8e-24 tr|A7QJJ1|A7QJJ1_VITVI Chromosome chr8 scaffold_106, whole genom... 110 7e-23 tr|A8JCZ5|A8JCZ5_CHLRE Pre-rRNA processing protein OS=Chlamydomo... 108 2e-22 tr|Q9M1J8|Q9M1J8_ARATH Putative uncharacterized protein F24I3.80... 99 2e-19 tr|Q8LA80|Q8LA80_ARATH Putative uncharacterized protein OS=Arabi... 99 2e-19 tr|B3S6B2|B3S6B2_TRIAD Putative uncharacterized protein OS=Trich... 95 3e-18 tr|A7S524|A7S524_NEMVE Predicted protein OS=Nematostella vectens... 94 5e-18 tr|B0EEN4|B0EEN4_ENTDI Nep1, putative OS=Entamoeba dispar SAW760... 89 1e-16 tr|A3EXW1|A3EXW1_MACHI Probable ribosome biogenesis protein NEP1... 89 2e-16 tr|A8K6D2|A8K6D2_HUMAN cDNA FLJ76620, highly similar to Homo sap... 84 7e-15 tr|Q29JM3|Q29JM3_DROPS GA17501 OS=Drosophila pseudoobscura pseud... 83 9e-15 tr|B4H387|B4H387_DROPE GL13401 OS=Drosophila persimilis GN=GL134... 83 9e-15 tr|Q7PR76|Q7PR76_ANOGA AGAP002808-PA OS=Anopheles gambiae GN=AGA... 82 1e-14 tr|B7P3H0|B7P3H0_IXOSC C2 factor (C2F), putative (Fragment) OS=I... 82 1e-14 tr|B4L2H4|B4L2H4_DROMO GI15406 OS=Drosophila mojavensis GN=GI154... 82 2e-14 tr|Q542P8|Q542P8_MOUSE Putative uncharacterized protein OS=Mus m... 82 2e-14 tr|B0WB67|B0WB67_CULQU Nucleolar essential protein 1 OS=Culex qu... 82 2e-14 tr|Q5B9M1|Q5B9M1_EMENI Putative uncharacterized protein OS=Emeri... 80 6e-14 tr|Q4WWI6|Q4WWI6_ASPFU RNA processing protein Emg1, putative OS=... 80 6e-14 tr|B0XZ38|B0XZ38_ASPFC RNA processing protein Emg1, putative OS=... 80 6e-14 tr|A7TF88|A7TF88_VANPO Putative uncharacterized protein OS=Vande... 80 6e-14 tr|Q17J58|Q17J58_AEDAE Nucleolar essential protein 1 (Nep1) OS=A... 80 7e-14
>tr|A9NNK1|A9NNK1_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 250
Score = 155 bits (392), Expect = 1e-36 Identities = 74/95 (77%), Positives = 85/95 (89%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 +K+LRV+K PVTKHLP ARRIGLSYSAPKV+KLHDYVAA K +VFVVGAMAHGKI Sbjct: 156 DKILRVIKNPVTKHLPSEARRIGLSYSAPKVVKLHDYVAASSDKIPLVFVVGAMAHGKIN 215
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKIL 286 ADYI+D I++SEYPLSAACCIGRICNA+EQ++KIL Sbjct: 216 ADYIDDFISISEYPLSAACCIGRICNAVEQKWKIL 250
>tr|A4RQL1|A4RQL1_OSTLU Predicted protein OS=Ostreococcus lucimarinus (strain CCE9901) GN=OSTLU_39810 PE=4 SV=1 Length = 222
Score = 125 bits (314), Expect = 2e-27 Identities = 58/95 (61%), Positives = 76/95 (80%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKL++VVKQPVTK+ P GARR+G S+SAP+V KL +YV A+ + +VF +GAMAHGK++ Sbjct: 128 EKLMQVVKQPVTKYFPAGARRVGFSFSAPEVKKLPEYVEALPEDAAVVFTIGAMAHGKVD 187
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKIL 286 Y +D I+VS YPLSAACCIGRICNA+E + I+ Sbjct: 188 VAYTDDFISVSRYPLSAACCIGRICNALELKHDIV 222
>tr|Q00SI6|Q00SI6_OSTTA Putative nucleolar essential protein (ISS) OS=Ostreococcus tauri GN=Ot18g01810 PE=4 SV=1 Length = 224
Score = 124 bits (312), Expect = 3e-27 Identities = 57/95 (60%), Positives = 77/95 (81%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKL+RVVKQPVT++ P GARR+G S+SAP+V +L +YV A+ + +VF VGAMAHGK++ Sbjct: 130 EKLMRVVKQPVTRYFPAGARRVGFSFSAPEVKRLPEYVRALPEDATVVFTVGAMAHGKVD 189
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKIL 286 Y +D I+VS+YPLSAACC+GRICNA+E + I+ Sbjct: 190 VAYTDDFISVSKYPLSAACCLGRICNALELKHDIV 224
>tr|B6T8Z1|B6T8Z1_MAIZE Ribosome biogenesis protein NEP1 OS=Zea mays PE=2 SV=1 Length = 286
Score = 122 bits (306), Expect = 1e-26 Identities = 58/94 (61%), Positives = 73/94 (77%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLL VVK PVT++LPVGAR+IGLS+SA K + L DYVA +VFVVGAMAHGKI+ Sbjct: 192 EKLLNVVKNPVTRYLPVGARKIGLSFSAEKSVNLFDYVAKSNDDEPLVFVVGAMAHGKID 251
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 +Y +D I + YPLSAACC+ RIC+A+EQ++ I Sbjct: 252 KEYTDDYIQICNYPLSAACCLNRICSALEQKWNI 285
>tr|Q6K882|Q6K882_ORYSJ Os02g0290400 protein OS=Oryza sativa subsp. japonica GN=OJ1086_G08.4 PE=2 SV=1 Length = 284
Score = 120 bits (302), Expect = 4e-26 Identities = 57/94 (60%), Positives = 73/94 (77%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLL V+K PVT++LPVGA++IGLSYSA K + L DYVA +VFVVGAMAHGKI+ Sbjct: 190 EKLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKID 249
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 +Y +D I + YPLSAACC+ RIC+A+EQ++ I Sbjct: 250 NEYSDDYIQICNYPLSAACCLNRICSALEQKWNI 283
>tr|B8AFV1|B8AFV1_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_06808 PE=4 SV=1 Length = 284
Score = 120 bits (302), Expect = 4e-26 Identities = 57/94 (60%), Positives = 73/94 (77%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLL V+K PVT++LPVGA++IGLSYSA K + L DYVA +VFVVGAMAHGKI+ Sbjct: 190 EKLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKID 249
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 +Y +D I + YPLSAACC+ RIC+A+EQ++ I Sbjct: 250 NEYSDDYIQICNYPLSAACCLNRICSALEQKWNI 283
>tr|A3A5Q2|A3A5Q2_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_006124 PE=4 SV=1 Length = 274
Score = 120 bits (302), Expect = 4e-26 Identities = 57/94 (60%), Positives = 73/94 (77%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLL V+K PVT++LPVGA++IGLSYSA K + L DYVA +VFVVGAMAHGKI+ Sbjct: 180 EKLLNVIKNPVTRYLPVGAKKIGLSYSAEKSVNLFDYVAKSSDDVPLVFVVGAMAHGKID 239
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 +Y +D I + YPLSAACC+ RIC+A+EQ++ I Sbjct: 240 NEYSDDYIQICNYPLSAACCLNRICSALEQKWNI 273
>tr|B7FLL0|B7FLL0_MEDTR Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 Length = 282
Score = 117 bits (293), Expect = 4e-25 Identities = 57/95 (60%), Positives = 74/95 (77%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLLR +K PVT++LPV +R+ GLSYS+ K++ +++Y++ I +VFVVGAMAHGK+E Sbjct: 188 EKLLRTIKNPVTQYLPVNSRKTGLSYSSEKLVDMNNYLSTIPSNQDLVFVVGAMAHGKVE 247
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKIL 286 DY ED IAVS YPLSAA CI RI NAIE ++ IL Sbjct: 248 TDYTEDYIAVSGYPLSAAYCITRITNAIEGKWNIL 282
>tr|A7QAF5|A7QAF5_VITVI Chromosome undetermined scaffold_71, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00033904001 PE=4 SV=1 Length = 271
Score = 113 bits (282), Expect = 8e-24 Identities = 56/94 (59%), Positives = 70/94 (74%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLLRV+K PVT++LPV +R+IG SYS+ K I + DYVAA+ +VFVVGAMAHGKI Sbjct: 177 EKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSIPMRDYVAAVSDDVDLVFVVGAMAHGKIS 236
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 DY +D IA+S YPLSAA C IC A+ Q++ I Sbjct: 237 NDYTDDFIAISGYPLSAAWCTYLICGALMQKWNI 270
>tr|A7QJJ1|A7QJJ1_VITVI Chromosome chr8 scaffold_106, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00000660001 PE=4 SV=1 Length = 271
Score = 110 bits (274), Expect = 7e-23 Identities = 54/94 (57%), Positives = 69/94 (73%) Frame = +2
Query: 2 EKLLRVVKQPVTKHLPVGARRIGLSYSAPKVIKLHDYVAAIGLKSKMVFVVGAMAHGKIE 181 EKLLRV+K PVT++LPV +R+IG SYS+ K + DYVAA+ +VFVVGAMAHGKI Sbjct: 177 EKLLRVIKNPVTQYLPVNSRKIGFSYSSEKSTPIRDYVAAVSDDVDLVFVVGAMAHGKIS 236
Query: 182 ADYIEDLIAVSEYPLSAACCIGRICNAIEQQFKI 283 DY +D IA+S YPLSA+ C IC A+ Q++ I Sbjct: 237 NDYTDDFIAISGYPLSASWCTYLICGALMQKWNI 270
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