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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912770
Clone id YMU001_000022_F10
Library
Length 517
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000022_F10.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTGAATCGAAAGATTAAACAGTGCAAACTGGATGCTCGACGGGAGCAATGGCTGGCTCA
GGTTACTATGAGCAAGCATTGCCAAGATGGTCACCAAGAGTCATTGTCATCATCCGGCAA
GCTTGACCTTGGAGAAATTGTCCATCCTGAGAATCACGATAATTTAGCCTATGGCTCCAG
AGGACATTCTACATTGTACTTCAGAGAAGTTTGACAAAACCTTCTCACGCTCTCACTTGC
ATTTGCTACCTCCAGAGCATTGTGGAGGGGAGGATTGGAAGCATACTTCTAGCCCTTCTG
GGTATGGCAGCTGCTTGTCTGATTGCTTCGGAACAGAAGTTTCGCCAAAATCGACAGGGT
CAGGTAGCCCGAAGAGCAAAGTGAAAAAAGTAGGAATTGTGCATGGGCAGGAAAATAGAG
AGAGGTTCAGCAATGAGATCAATTCGAAAGATGGAACGGCAGGGCATATCAGGTGCATCT
TTGATCGCCATGCTGACAAAACTAACGAGAATGGTCA
■■Homology search results ■■ -
sp_hit_id Q9Z319
Definition sp|Q9Z319|CORIN_MOUSE Atrial natriuretic peptide-converting enzyme OS=Mus musculus
Align length 44
Score (bit) 32.7
E-value 1.0
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912770|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F10.
         (517 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Z319|CORIN_MOUSE Atrial natriuretic peptide-converting enzy...    33   1.0  
sp|Q84BP4|YM4C6_STAAU Uncharacterized chromosomal cassette SCCme...    30   5.2  
sp|Q6GKM5|YM4C6_STAAR Uncharacterized chromosomal cassette SCCme...    30   5.2  

>sp|Q9Z319|CORIN_MOUSE Atrial natriuretic peptide-converting enzyme
           OS=Mus musculus GN=Corin PE=2 SV=1
          Length = 1113

 Score = 32.7 bits (73), Expect = 1.0
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -1

Query: 322 SDKQLPYPEGLEVCFQSS-PPQCSGGSKCK*EREKVLSNFSEVQ 194
           SD Q P PEG + CF SS    C+G S C  + +  LSN S+ +
Sbjct: 483 SDSQTPCPEGEQGCFGSSCVESCAGSSLC--DSDSSLSNCSQCE 524


>sp|Q84BP4|YM4C6_STAAU Uncharacterized chromosomal cassette SCCmec
           type IVc protein CR006 OS=Staphylococcus aureus GN=CR006
           PE=4 SV=1
          Length = 706

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 267 LHNALEVANASESVRRFCQTSLKYNV 190
           L N LE+ N  ES+ +FC  +L YN+
Sbjct: 226 LRNGLELHNVEESICKFCGNNLNYNL 251


>sp|Q6GKM5|YM4C6_STAAR Uncharacterized chromosomal cassette SCCmec
           type IVc protein CR006 OS=Staphylococcus aureus (strain
           MRSA252) GN=SAR0080 PE=4 SV=1
          Length = 706

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -2

Query: 267 LHNALEVANASESVRRFCQTSLKYNV 190
           L N LE+ N  ES+ +FC  +L YN+
Sbjct: 226 LRNGLELHNVEESICKFCGNNLNYNL 251
tr_hit_id A9RPN5
Definition tr|A9RPN5|A9RPN5_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens
Align length 30
Score (bit) 41.6
E-value 0.024
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912770|Adiantum capillus-veneris mRNA, clone:
YMU001_000022_F10.
         (517 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A9RPN5|A9RPN5_PHYPA Predicted protein OS=Physcomitrella paten...    42   0.024
tr|Q7XUS4|Q7XUS4_ORYSJ Os04g0463700 protein OS=Oryza sativa subs...    41   0.041
tr|B8AV55|B8AV55_ORYSI Putative uncharacterized protein OS=Oryza...    41   0.041
tr|A9SC71|A9SC71_PHYPA Predicted protein OS=Physcomitrella paten...    40   0.053
tr|A9T8D0|A9T8D0_PHYPA Predicted protein OS=Physcomitrella paten...    39   0.15 
tr|Q2L7C3|Q2L7C3_9MAGN Putative uncharacterized protein OS=Vitis...    39   0.20 
tr|B6VA56|B6VA56_9MAGN Putative anti-virus transcriptional facto...    39   0.20 
tr|A7PD85|A7PD85_VITVI Chromosome chr17 scaffold_12, whole genom...    39   0.20 
tr|Q6MWE6|Q6MWE6_ORYSJ B1358B12.22 protein (Putative uncharacter...    38   0.35 
tr|B6VA58|B6VA58_9MAGN Putative anti-virus transcriptional facto...    38   0.35 
tr|B6VA57|B6VA57_9MAGN Putative anti-virus transcriptional facto...    38   0.35 
tr|Q9SU70|Q9SU70_ARATH Putative uncharacterized protein T17F15.6...    36   1.3  
tr|Q2V3Q3|Q2V3Q3_ARATH Uncharacterized protein At3g48070.2 OS=Ar...    36   1.3  
tr|B7K7V4|B7K7V4_9CHRO Putative PAS/PAC sensor protein OS=Cyanot...    35   1.7  
tr|A9RXI8|A9RXI8_PHYPA Predicted protein OS=Physcomitrella paten...    35   2.9  
tr|B8LRM3|B8LRM3_PICSI Putative uncharacterized protein OS=Picea...    34   3.8  
tr|B1M9U6|B1M9U6_METRJ Putative uncharacterized protein OS=Methy...    34   5.0  
tr|A7PMK1|A7PMK1_VITVI Chromosome chr14 scaffold_21, whole genom...    33   6.5  
tr|A1CRU4|A1CRU4_ASPCL GPI anchored serine-threonine rich protei...    33   8.5  

>tr|A9RPN5|A9RPN5_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_160398 PE=4 SV=1
          Length = 600

 Score = 41.6 bits (96), Expect = 0.024
 Identities = 17/30 (56%), Positives = 23/30 (76%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQE 100
           K+KQCKLDARREQWL+Q +  +  + G Q+
Sbjct: 240 KLKQCKLDARREQWLSQCSQERQGKAGKQQ 269


>tr|Q7XUS4|Q7XUS4_ORYSJ Os04g0463700 protein OS=Oryza sativa subsp.
           japonica GN=OSJNBa0060P14.3 PE=2 SV=2
          Length = 327

 Score = 40.8 bits (94), Expect = 0.041
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSS 115
           K+KQCKLDARREQWL+QV      +DG +   S+S
Sbjct: 27  KLKQCKLDARREQWLSQV------KDGKEAKASTS 55


>tr|B8AV55|B8AV55_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_16206 PE=4 SV=1
          Length = 327

 Score = 40.8 bits (94), Expect = 0.041
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSS 115
           K+KQCKLDARREQWL+QV      +DG +   S+S
Sbjct: 27  KLKQCKLDARREQWLSQV------KDGKEAKASTS 55


>tr|A9SC71|A9SC71_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_164072 PE=4 SV=1
          Length = 558

 Score = 40.4 bits (93), Expect = 0.053
 Identities = 22/42 (52%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
 Frame = +2

Query: 2   VNR--KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSSGK 121
           VNR  K+KQCKLDARREQWL+Q +  K  QD  ++   S+ +
Sbjct: 184 VNRTAKLKQCKLDARREQWLSQGSQGK--QDRAEQQQQSNAQ 223


>tr|A9T8D0|A9T8D0_PHYPA Predicted protein OS=Physcomitrella patens
           subsp. patens GN=PHYPADRAFT_168611 PE=4 SV=1
          Length = 472

 Score = 38.9 bits (89), Expect = 0.15
 Identities = 16/22 (72%), Positives = 19/22 (86%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSK 76
           K+KQCKLDARREQWL+Q +  K
Sbjct: 103 KLKQCKLDARREQWLSQGSQGK 124


>tr|Q2L7C3|Q2L7C3_9MAGN Putative uncharacterized protein OS=Vitis
           pseudoreticulata PE=2 SV=1
          Length = 258

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSSGKLDLGEIVHPENHDN 163
           K+KQCKLDARREQWL++V  +  C+ G  E +  S        +H  N  N
Sbjct: 28  KLKQCKLDARREQWLSKV-KNNGCR-GESEGIPESS-------MHKRNESN 69


>tr|B6VA56|B6VA56_9MAGN Putative anti-virus transcriptional factor
           OS=Vitis pseudoreticulata PE=2 SV=1
          Length = 350

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSSGKLDLGEIVHPENHDN 163
           K+KQCKLDARREQWL++V  +  C+ G  E +  S        +H  N  N
Sbjct: 28  KLKQCKLDARREQWLSKV-KNNGCR-GESEGIPESS-------MHKRNESN 69


>tr|A7PD85|A7PD85_VITVI Chromosome chr17 scaffold_12, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016177001
           PE=4 SV=1
          Length = 288

 Score = 38.5 bits (88), Expect = 0.20
 Identities = 22/51 (43%), Positives = 29/51 (56%)
 Frame = +2

Query: 11  KIKQCKLDARREQWLAQVTMSKHCQDGHQESLSSSGKLDLGEIVHPENHDN 163
           K+KQCKLDARREQWL++V  +  C+ G  E +  S        +H  N  N
Sbjct: 28  KLKQCKLDARREQWLSKV-KNNGCR-GESEGIPESS-------MHKRNESN 69


>tr|Q6MWE6|Q6MWE6_ORYSJ B1358B12.22 protein (Putative
          uncharacterized protein) OS=Oryza sativa subsp.
          japonica GN=B1358B12.22 PE=4 SV=1
          Length = 341

 Score = 37.7 bits (86), Expect = 0.35
 Identities = 15/17 (88%), Positives = 17/17 (100%)
 Frame = +2

Query: 11 KIKQCKLDARREQWLAQ 61
          K+KQCKLDARREQWL+Q
Sbjct: 27 KLKQCKLDARREQWLSQ 43


>tr|B6VA58|B6VA58_9MAGN Putative anti-virus transcriptional factor
          OS=Vitis pseudoreticulata PE=2 SV=1
          Length = 348

 Score = 37.7 bits (86), Expect = 0.35
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +2

Query: 11 KIKQCKLDARREQWLAQV 64
          K+KQCKLDARREQWL++V
Sbjct: 28 KLKQCKLDARREQWLSKV 45