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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912798
Clone id YMU001_000023_A04
Library
Length 523
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_A04.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GGTCCTCACAAGCTATTTTGCAATCCAAACATCTATCAAATCCAATCCCTCTAGCAAAAA
CATTTACTCCGATTGGCATAGTCCCCCAATAATGCCTTCCATAGAAAGATCTTCATCGTT
AGTGTGGCCATTGTGGCTTCCAAATGTTATTTGCTATCGGCATCCACCTTGCCTCCAGCC
ATTGCTTTCCCTGCATCTTTTGAAGGGGGGAGAATTAATCAGCTGAGATCATTAGAGTAT
GGTAGATGTCCTTGGTTTTTGGTTTATAGAAGTGTCTGCTTCCAGGCCACCACCACACTT
TTATTCGAACATGGACTTGCACACTTGCACATAGTAGTGCAAGTAGCTGCCAAGCCCCTC
CAAAACTCTTAAGACCAGCAGTCTTTCAATCCCATTATTTAGGTGGAAATGGACAACTAG
CTGGTCTGCTCCTTTCTAGCTCATGTGGTTGCTATCCCAAAACTAGCCAAGATGTTTGAG
ACCTTTATTGTTGATCTTTCTAGCTATCTCTCCAAAATTGGCC
■■Homology search results ■■ -
sp_hit_id Q9BBU2
Definition sp|Q9BBU2|MATK_LOTJA Maturase K OS=Lotus japonicus
Align length 60
Score (bit) 32.7
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912798|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A04.
         (523 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BBU2|MATK_LOTJA Maturase K OS=Lotus japonicus GN=matK PE=3 ...    33   1.1  
sp|Q8HUG7|MATK_CORVR Maturase K OS=Coronilla varia GN=matK PE=3 ...    33   1.1  
sp|Q9TKR9|MATK_AUSBL Maturase K OS=Austrosteenisia blackii GN=ma...    32   1.4  
sp|Q9TKP8|MATK_LOTPU Maturase K OS=Lotus purshianus GN=matK PE=3...    32   2.4  
sp|Q9TKP6|MATK_WISFR Maturase K OS=Wisteria frutescens GN=matK P...    31   4.1  
sp|Q6PSB9|MATK_VIGMU Maturase K OS=Vigna mungo GN=matK PE=3 SV=1       31   4.1  
sp|Q9TKP9|MATK_ROBPS Maturase K OS=Robinia pseudoacacia GN=matK ...    31   4.1  
sp|O47141|MATK_ACTCH Maturase K OS=Actinidia chinensis GN=matK P...    31   4.1  
sp|Q5YK05|MATK_CICAR Maturase K OS=Cicer arietinum GN=matK PE=3 ...    30   5.3  
sp|A5PLL1|AN34B_HUMAN Ankyrin repeat domain-containing protein 3...    30   6.9  
sp|Q8NGN5|O10G8_HUMAN Olfactory receptor 10G8 OS=Homo sapiens GN...    30   7.0  
sp|Q6PSC6|MATK_PHAVU Maturase K OS=Phaseolus vulgaris GN=matK PE...    30   7.0  
sp|Q9UUZ3|MANBA_ASPNG Beta-mannosidase OS=Aspergillus niger GN=m...    30   7.0  
sp|Q9TKS6|MATK_SOYBN Maturase K OS=Glycine max GN=matK PE=3 SV=2       30   9.1  
sp|Q9TKS4|MATK_PHACN Maturase K OS=Phaseolus coccineus GN=matK P...    30   9.1  

>sp|Q9BBU2|MATK_LOTJA Maturase K OS=Lotus japonicus GN=matK PE=3
           SV=1
          Length = 508

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQWPH 122
           +++++    H  +   KD + TL    D F    + QGK  L ++ +PI  N WK  + H
Sbjct: 244 RIFFYAKKGHLVEVFVKDFFSTLTFFKDPFIHYVRYQGKSILASKNLPILMNKWKYYFIH 303


>sp|Q8HUG7|MATK_CORVR Maturase K OS=Coronilla varia GN=matK PE=3
           SV=1
          Length = 508

 Score = 32.7 bits (73), Expect = 1.1
 Identities = 17/60 (28%), Positives = 29/60 (48%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQWPH 122
           +++++    H  +   KD + TL    D F    + QGK  L ++ +PI  N WK  + H
Sbjct: 244 RIFFYAKKGHLVEVFVKDFFSTLTFFKDPFIHYVRYQGKSILASKNLPILMNKWKYYFIH 303


>sp|Q9TKR9|MATK_AUSBL Maturase K OS=Austrosteenisia blackii GN=matK
           PE=3 SV=1
          Length = 506

 Score = 32.3 bits (72), Expect = 1.4
 Identities = 21/85 (24%), Positives = 37/85 (43%), Gaps = 8/85 (9%)
 Frame = -1

Query: 352 WQLLALLCASVQVHVRIK--------VWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQK 197
           ++ + L   +   H+R+K        + ++    H  +   KD  +TL    D F    +
Sbjct: 219 YESIFLFLRNKSTHLRLKSFRVLIERISFYAKVEHLVEVFAKDFSYTLSFFKDPFIHYVR 278

Query: 196 MQGKQWLEARWMPIANNIWKPQWPH 122
            QGK  L ++ MP+  N WK  + H
Sbjct: 279 YQGKSILVSKNMPLLMNKWKSYFIH 303


>sp|Q9TKP8|MATK_LOTPU Maturase K OS=Lotus purshianus GN=matK PE=3
           SV=1
          Length = 508

 Score = 31.6 bits (70), Expect = 2.4
 Identities = 16/55 (29%), Positives = 27/55 (49%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWK 137
           +++++    H  +   KD + TL    D F    + QGK  L ++ +PI  N WK
Sbjct: 244 RIFFYAKKGHLVEVFLKDFFSTLTFFKDPFIHYVRYQGKSILASKNLPILMNKWK 298


>sp|Q9TKP6|MATK_WISFR Maturase K OS=Wisteria frutescens GN=matK PE=3
           SV=1
          Length = 506

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 17/60 (28%), Positives = 27/60 (45%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQWPH 122
           +++++    H  K   KD   TL    D F    + QGK  L ++  P+  N WK  + H
Sbjct: 244 RIFFYAKREHLVKVFPKDFSSTLTFFKDPFIHYVRYQGKSILASKNAPLLMNKWKHYFIH 303


>sp|Q6PSB9|MATK_VIGMU Maturase K OS=Vigna mungo GN=matK PE=3 SV=1
          Length = 504

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 18/62 (29%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = -1

Query: 313 HVRI---KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNI 143
           H R+   +++++   +H  K  TK+  +TL    D F    + QGK  L  +  P   N 
Sbjct: 236 HFRVFFERIFFYEKIKHLVKVSTKNCSYTLFFFKDTFIHYVRYQGKSILVLKNTPFLINK 295

Query: 142 WK 137
           WK
Sbjct: 296 WK 297


>sp|Q9TKP9|MATK_ROBPS Maturase K OS=Robinia pseudoacacia GN=matK
           PE=3 SV=1
          Length = 507

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQWPH 122
           +++++   +H  +   KD   TL    D F    + QGK  L ++  P+  N WK  + H
Sbjct: 244 RIFFYAKRKHLVEVVAKDFLSTLTFFKDPFIHYVRYQGKSILASKNAPLLMNKWKYYFIH 303


>sp|O47141|MATK_ACTCH Maturase K OS=Actinidia chinensis GN=matK PE=3
           SV=1
          Length = 504

 Score = 30.8 bits (68), Expect = 4.1
 Identities = 16/55 (29%), Positives = 26/55 (47%)
 Frame = -1

Query: 301 KVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWK 137
           +++++    HF K  TKD    L +  D F    + QGK  L ++   +  N WK
Sbjct: 243 RIYFYGKIEHFVKVFTKDFQDILWLFKDPFMHYVRYQGKSILASKGTSLLMNKWK 297


>sp|Q5YK05|MATK_CICAR Maturase K OS=Cicer arietinum GN=matK PE=3
           SV=1
          Length = 509

 Score = 30.4 bits (67), Expect = 5.3
 Identities = 21/85 (24%), Positives = 36/85 (42%), Gaps = 8/85 (9%)
 Frame = -1

Query: 352 WQLLALLCASVQVHVRIK--------VWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQK 197
           ++ + L   +   H+R+K        ++++    H  +   KD  +TL    D      +
Sbjct: 219 YESIFLFLRNKSSHLRLKSFSVFFERIFFYAKREHLVEVFAKDFPYTLKFFKDPLIHYVR 278

Query: 196 MQGKQWLEARWMPIANNIWKPQWPH 122
            QGK  L +R  PI  N WK  + H
Sbjct: 279 YQGKSILASRNAPILMNKWKHYFLH 303


>sp|A5PLL1|AN34B_HUMAN Ankyrin repeat domain-containing protein 34B
           OS=Homo sapiens GN=ANKRD34B PE=2 SV=2
          Length = 514

 Score = 30.0 bits (66), Expect = 6.9
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
 Frame = -3

Query: 314 PCSNKSVVVAWKQTLL*TKNQGHLPYSND--LS*LILPPSKDAGKAMAGGK 168
           P SN+++  +  ++++  +N G   YS+D  LS  + PP+ + GKA+ G K
Sbjct: 344 PDSNQTIFASTLRSIVQKRNLGANHYSSDSQLSAGLTPPTSEDGKALIGKK 394
tr_hit_id A0L4C4
Definition tr|A0L4C4|A0L4C4_MAGSM Putative uncharacterized protein OS=Magnetococcus sp. (strain MC-1)
Align length 65
Score (bit) 35.4
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912798|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A04.
         (523 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A0L4C4|A0L4C4_MAGSM Putative uncharacterized protein OS=Magne...    35   1.7  
tr|Q4PDL6|Q4PDL6_USTMA Putative uncharacterized protein OS=Ustil...    35   1.7  
tr|B3LYL5|B3LYL5_DROAN GF19936 OS=Drosophila ananassae GN=GF1993...    35   2.2  
tr|Q9NFF9|Q9NFF9_PLAFA Putative uncharacterized protein (Fragmen...    35   3.0  
tr|Q8I2H4|Q8I2H4_PLAF7 Uncharacterised trophozoite protein OS=Pl...    35   3.0  
tr|B6KP79|B6KP79_TOXGO 1-deoxy-D-xylulose 5-phosphate synthase, ...    33   8.6  

>tr|A0L4C4|A0L4C4_MAGSM Putative uncharacterized protein
           OS=Magnetococcus sp. (strain MC-1) GN=Mmc1_0290 PE=4
           SV=1
          Length = 608

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
 Frame = -1

Query: 352 WQLLALLCASVQVHVRIKVWWWPGSRHFYKPKTKDIYHTLMISAD*FSPLQKM-QGKQWL 176
           WQ    LC+S  +  R  +WWWP  R        ++Y  L    D   PLQ++ +GKQ  
Sbjct: 492 WQADFNLCSSQPIQGRT-LWWWPAQRPL------NVYTPLKEEIDFSQPLQQLVEGKQIK 544

Query: 175 EARWM 161
           +  W+
Sbjct: 545 QVAWV 549


>tr|Q4PDL6|Q4PDL6_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM01797.1 PE=4 SV=1
          Length = 657

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
 Frame = +1

Query: 145 CYLLSASTLPPAIAFPASFEGGRINQLRSLEYGRCPWFLVYRSVCFQATTTLLF----EH 312
           C+L    ++  A+  P S  GG+I + + L     P FL + S+C  A+  L+F     +
Sbjct: 171 CFLCIVGSVIIALNAPTSHVGGKITEFQKLFL--APGFLSWASICIVASLVLIFVFAPRY 228

Query: 313 GLAHLHIVVQVAA 351
           G  H+ I + V +
Sbjct: 229 GKTHMMIYITVCS 241


>tr|B3LYL5|B3LYL5_DROAN GF19936 OS=Drosophila ananassae GN=GF19936
           PE=4 SV=1
          Length = 148

 Score = 35.0 bits (79), Expect = 2.2
 Identities = 18/43 (41%), Positives = 22/43 (51%)
 Frame = +3

Query: 249 SLVFGL*KCLLPGHHHTFIRTWTCTLAHSSASSCQAPPKLLRP 377
           S V  +    L G HH + R  T T+ H + SSC  PP LL P
Sbjct: 14  SFVIAIGANCLRGTHHMWQRKPTPTVGHGAPSSCSRPPSLLLP 56


>tr|Q9NFF9|Q9NFF9_PLAFA Putative uncharacterized protein (Fragment)
           OS=Plasmodium falciparum PE=2 SV=1
          Length = 85

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -1

Query: 280 SRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQW-PH*R*RSF 104
           S+H YKPKT++I H  M   +  +P    Q K     +++P  NN ++ +W    R   +
Sbjct: 8   SKHPYKPKTREIIHPHMTPPEYLAPSDCFQAKTGELQQYIP--NNYYRVKWIESLRSGEY 65

Query: 103 YGRHY-WGTMP 74
            G  Y W  +P
Sbjct: 66  LGEDYPWNLLP 76


>tr|Q8I2H4|Q8I2H4_PLAF7 Uncharacterised trophozoite protein
           OS=Plasmodium falciparum (isolate 3D7) GN=PFI1665w PE=4
           SV=1
          Length = 200

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -1

Query: 280 SRHFYKPKTKDIYHTLMISAD*FSPLQKMQGKQWLEARWMPIANNIWKPQW-PH*R*RSF 104
           S+H YKPKT++I H  M   +  +P    Q K     +++P  NN ++ +W    R   +
Sbjct: 20  SKHPYKPKTREIIHPHMTPPEYLAPSDCFQAKTGELQQYIP--NNYYRVKWIESLRSGEY 77

Query: 103 YGRHY-WGTMP 74
            G  Y W  +P
Sbjct: 78  LGEDYPWNLLP 88


>tr|B6KP79|B6KP79_TOXGO 1-deoxy-D-xylulose 5-phosphate synthase,
           putative OS=Toxoplasma gondii ME49 GN=TGME49_008820 PE=4
           SV=1
          Length = 1412

 Score = 33.1 bits (74), Expect = 8.6
 Identities = 16/35 (45%), Positives = 22/35 (62%)
 Frame = +2

Query: 47  PSSKNIYSDWHSPPIMPSIERSSSLVWPLWLPNVI 151
           PSSK + S W   P +PS+ RSSSL   L +P ++
Sbjct: 491 PSSKPVASAWRYSPSLPSVARSSSLFERLSVPPLL 525