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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912802
Clone id YMU001_000023_A08
Library
Length 481
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_A08.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
TTTATTTGTATTTTTTTGTTAAAAAGCTCCACACTTGGAAGCATCCACATTACTCAGCTT
GGCTCAAAATACAAGCTCTGGATGCTTTTAGTACAAAGCCATCCTCTGCCACTATTACCA
CAAAATCATGGAACAGCAGACAATCCTCCAGTGCTTACTTGGAGCGTGATCTGAAAGCTG
CGCACAGATTTTACACGCATATAACAAATGGAAGCAGCACTAATAAGACATCATTCCAGA
ATGCATGCTATGCAGAAGAGATTGAGCAATGAGTTCACGCCTTTCCAGTGAGAGATGAGA
CCACGGTAAGCGTTCGCAACATGTATCATCATCTTGAACGGGGAAGTAAAGGTCCAAATC
AAAGGGCTCATTAAGTTGCTCACAGATGTTGTGCAGCACACAACATGCTCCAAGAATAGC
AGGCAACTCTTGGACCTTGATCTCTGCACGCTTCGTCAAATACTGCCATCGCCCTTTCAA
C
■■Homology search results ■■ -
sp_hit_id Q96YS2
Definition sp|Q96YS2|CAPPA_SULTO Phosphoenolpyruvate carboxylase OS=Sulfolobus tokodaii
Align length 33
Score (bit) 32.3
E-value 1.1
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912802|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A08.
         (481 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q96YS2|CAPPA_SULTO Phosphoenolpyruvate carboxylase OS=Sulfolo...    32   1.1  
sp|P33537|DPOM_NEUCR Probable DNA polymerase OS=Neurospora crass...    30   4.3  

>sp|Q96YS2|CAPPA_SULTO Phosphoenolpyruvate carboxylase OS=Sulfolobus
           tokodaii GN=ppcA PE=3 SV=1
          Length = 511

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 13/33 (39%), Positives = 22/33 (66%)
 Frame = +3

Query: 102 SSATITTKSWNSRQSSSAYLERDLKAAHRFYTH 200
           S +T+T K WN  + +  Y++ DL+AA RF ++
Sbjct: 400 SLSTLTEKEWNVLEKNYKYIKHDLQAAARFVSY 432


>sp|P33537|DPOM_NEUCR Probable DNA polymerase OS=Neurospora crassa
           PE=3 SV=1
          Length = 1021

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +3

Query: 108 ATITTKSWNSRQSSSAYLERDLKAAHRFYTHITNGS 215
           A + T  W+ R+ +  YLE+D+KA ++    ++N +
Sbjct: 498 AAMYTNKWSMRKETIIYLEKDIKALYQLMMEMSNNT 533
tr_hit_id B6SGX9
Definition tr|B6SGX9|B6SGX9_MAIZE Transposon protein CACTA, En/Spm sub-class OS=Zea mays
Align length 72
Score (bit) 73.6
E-value 5.0e-12
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912802|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A08.
         (481 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6SGX9|B6SGX9_MAIZE Transposon protein CACTA, En/Spm sub-clas...    74   5e-12
tr|A2ZUR7|A2ZUR7_ORYSJ Putative uncharacterized protein OS=Oryza...    74   5e-12
tr|Q9LYH2|Q9LYH2_ARATH Putative uncharacterized protein F14F18_1...    72   1e-11
tr|Q8LJ71|Q8LJ71_ORYSJ Putative uncharacterized protein B1097D05...    72   2e-11
tr|B8AAR5|B8AAR5_ORYSI Putative uncharacterized protein OS=Oryza...    72   2e-11
tr|B6SVG3|B6SVG3_MAIZE Putative uncharacterized protein OS=Zea m...    72   2e-11
tr|A7P4N6|A7P4N6_VITVI Chromosome chr4 scaffold_6, whole genome ...    71   3e-11
tr|B6D1Q6|B6D1Q6_SOLLC Salt responsive protein 2 OS=Solanum lyco...    70   4e-11
tr|A7PE37|A7PE37_VITVI Chromosome chr11 scaffold_13, whole genom...    69   1e-10
tr|Q9SZQ1|Q9SZQ1_ARATH Putative uncharacterized protein F27B13.2...    67   3e-10
tr|Q8LCT9|Q8LCT9_ARATH Putative uncharacterized protein OS=Arabi...    67   3e-10
tr|Q84J48|Q84J48_ARATH Putative uncharacterized protein At4g2978...    67   3e-10
tr|Q6L4R6|Q6L4R6_ORYSJ Os05g0593000 protein OS=Oryza sativa subs...    67   4e-10
tr|B8AXG8|B8AXG8_ORYSI Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|B4F975|B4F975_MAIZE Putative uncharacterized protein OS=Zea m...    67   4e-10
tr|A3B7E4|A3B7E4_ORYSJ Putative uncharacterized protein OS=Oryza...    67   4e-10
tr|Q5SNE7|Q5SNE7_ORYSJ Putative uncharacterized protein P0512G09...    62   1e-08
tr|B7EXU7|B7EXU7_ORYSJ cDNA clone:001-117-G12, full insert seque...    62   1e-08
tr|A2ZQ45|A2ZQ45_ORYSJ Putative uncharacterized protein OS=Oryza...    62   1e-08
tr|Q60F07|Q60F07_ORYSJ Putative uncharacterized protein Oj1111_A...    61   3e-08
tr|A3BR12|A3BR12_ORYSJ Putative uncharacterized protein OS=Oryza...    61   3e-08
tr|Q6EPP1|Q6EPP1_ORYSJ Putative uncharacterized protein P0663F07...    59   1e-07
tr|Q65WX7|Q65WX7_ORYSJ Putative uncharacterized protein P0683B12...    55   1e-06
tr|A3B0M6|A3B0M6_ORYSJ Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|A2Y145|A2Y145_ORYSI Putative uncharacterized protein OS=Oryza...    55   1e-06
tr|Q652V5|Q652V5_ORYSJ Putative uncharacterized protein P0046H10...    55   2e-06
tr|Q60F08|Q60F08_ORYSJ Putative uncharacterized protein OJ1111_A...    53   9e-06
tr|B7QE74|B7QE74_IXOSC Transposase, putative OS=Ixodes scapulari...    52   2e-05
tr|B7PBA9|B7PBA9_IXOSC Transposase, putative OS=Ixodes scapulari...    50   7e-05
tr|Q58EQ3|Q58EQ3_DANRE Zgc:113227 OS=Danio rerio GN=zgc:113227 P...    45   0.002

>tr|B6SGX9|B6SGX9_MAIZE Transposon protein CACTA, En/Spm sub-class
           OS=Zea mays PE=2 SV=1
          Length = 473

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 35/72 (48%), Positives = 46/72 (63%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+Q+LP +LGACCVLHNICE+  +  D D+ F + DDD   E    
Sbjct: 380 LKSRWGCLQKRTEVKLQDLPVVLGACCVLHNICERAGDAVDPDIAFQLFDDDMVAENPVR 439

Query: 300 SHLSLERRELIA 265
           S  ++  R+ IA
Sbjct: 440 STAAVAARDNIA 451


>tr|A2ZUR7|A2ZUR7_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_002289 PE=4 SV=1
          Length = 413

 Score = 73.6 bits (179), Expect = 5e-12
 Identities = 36/73 (49%), Positives = 46/73 (63%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+Q+LP +LGACCVLHNICE   E  + +L F + DD+T  E    
Sbjct: 328 LKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPELRFELVDDETSPETPVR 387

Query: 300 SHLSLERRELIAQ 262
           S  +   R+ IAQ
Sbjct: 388 SEAAKRARDNIAQ 400


>tr|Q9LYH2|Q9LYH2_ARATH Putative uncharacterized protein F14F18_180
           (At5g12010/F14F18_180) OS=Arabidopsis thaliana
           GN=F14F18_180 PE=2 SV=1
          Length = 502

 Score = 72.0 bits (175), Expect = 1e-11
 Identities = 34/72 (47%), Positives = 47/72 (65%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LKGRW  L KR E+K+Q+LP +LGACCVLHNICE   E  + +L   V DD+   E +  
Sbjct: 417 LKGRWACLQKRTEVKLQDLPTVLGACCVLHNICEMREEKMEPELMVEVIDDEVLPENVLR 476

Query: 300 SHLSLERRELIA 265
           S  +++ R+ I+
Sbjct: 477 SVNAMKARDTIS 488


>tr|Q8LJ71|Q8LJ71_ORYSJ Putative uncharacterized protein B1097D05.32
           (Os01g0582600 protein) OS=Oryza sativa subsp. japonica
           GN=B1097D05.32 PE=4 SV=1
          Length = 551

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 35/72 (48%), Positives = 45/72 (62%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+Q+LP +LGACCVLHNICE   E  + +L F + DD+T  E    
Sbjct: 466 LKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPELRFELVDDETSPETPVR 525

Query: 300 SHLSLERRELIA 265
           S  +   R+ IA
Sbjct: 526 SEAAKRARDNIA 537


>tr|B8AAR5|B8AAR5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_02577 PE=4 SV=1
          Length = 299

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 35/72 (48%), Positives = 45/72 (62%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+Q+LP +LGACCVLHNICE   E  + +L F + DD+T  E    
Sbjct: 214 LKARWACLQKRTEVKLQDLPVVLGACCVLHNICETRGEELEPELRFELVDDETSPETPVR 273

Query: 300 SHLSLERRELIA 265
           S  +   R+ IA
Sbjct: 274 SEAAKRARDNIA 285


>tr|B6SVG3|B6SVG3_MAIZE Putative uncharacterized protein OS=Zea mays
           PE=2 SV=1
          Length = 451

 Score = 71.6 bits (174), Expect = 2e-11
 Identities = 36/72 (50%), Positives = 45/72 (62%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LKGRW  L KR E+K+Q+LP +LGACCVLHNICE   E  D  L   + DD+T  E    
Sbjct: 366 LKGRWACLQKRTEVKLQDLPVVLGACCVLHNICESRGEGMDPALRCDIDDDETVPENPVR 425

Query: 300 SHLSLERRELIA 265
           S  + + R+ IA
Sbjct: 426 SDGATKARDDIA 437


>tr|A7P4N6|A7P4N6_VITVI Chromosome chr4 scaffold_6, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00032220001
           PE=4 SV=1
          Length = 484

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 36/72 (50%), Positives = 46/72 (63%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+Q+LP +LGACCVLHNICE  NE  D +L   + DD+   E    
Sbjct: 399 LKARWCCLQKRTEVKLQDLPVVLGACCVLHNICELQNEEMDPELRINLIDDEMIPEIPLR 458

Query: 300 SHLSLERRELIA 265
           S  S++ R+ IA
Sbjct: 459 STTSMKARDAIA 470


>tr|B6D1Q6|B6D1Q6_SOLLC Salt responsive protein 2 OS=Solanum
           lycopersicum GN=SlSRG2 PE=2 SV=1
          Length = 499

 Score = 70.5 bits (171), Expect = 4e-11
 Identities = 33/72 (45%), Positives = 46/72 (63%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           +K RW  L KR E+K+Q+LP +LGACCVLHNICE   E  +  L F + DD+   E +  
Sbjct: 414 MKARWSCLRKRTEVKLQDLPVVLGACCVLHNICEMRGEQLNPGLRFDLFDDEMVPENIVR 473

Query: 300 SHLSLERRELIA 265
           S  +++ R+ IA
Sbjct: 474 SMNAVQARDQIA 485


>tr|A7PE37|A7PE37_VITVI Chromosome chr11 scaffold_13, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00016518001
           PE=4 SV=1
          Length = 466

 Score = 68.9 bits (167), Expect = 1e-10
 Identities = 35/72 (48%), Positives = 44/72 (61%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDDDTCCERLPW 301
           LK RW  L KR E+K+ +LP +LGACCVLHNIC+  NE  D  L F + DD+   E    
Sbjct: 381 LKRRWSCLQKRTEVKLLDLPVVLGACCVLHNICQMRNEEMDPALQFELFDDEMIPENGLR 440

Query: 300 SHLSLERRELIA 265
           S  S + R+ IA
Sbjct: 441 SASSAQARDRIA 452


>tr|Q9SZQ1|Q9SZQ1_ARATH Putative uncharacterized protein F27B13.20
           (Putative uncharacterized protein AT4g29780)
           OS=Arabidopsis thaliana GN=F27B13.20 PE=4 SV=1
          Length = 515

 Score = 67.4 bits (163), Expect = 3e-10
 Identities = 31/51 (60%), Positives = 36/51 (70%)
 Frame = -2

Query: 480 LKGRWQYLTKRAEIKVQELPAILGACCVLHNICEQLNEPFDLDLYFPVQDD 328
           LKGRW  L KR E+K+Q+LP +LGACCVLHNICE   E    +L F V DD
Sbjct: 430 LKGRWACLQKRTEVKLQDLPYVLGACCVLHNICEMRKEEMLPELKFEVFDD 480