BP912806
Clone id YMU001_000023_A12
Library
Length 145
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_A12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
AATTACAACCTTAGAAATGGTGAATTTAAATGCCCTTGCAGTCCATAGCCAGATTTGGGA
ATCACATGCAACTGCATCACGCAATGATGAGCCAACTCCACCGAAGCAATCTGGGGAGAA
TTGGCACAGCATGGCGTCGTCACAC
■■Homology search results ■■ -
sp_hit_id Q0VA04
Definition sp|Q0VA04|CQ071_XENTR UPF0487 protein C17orf71 homolog OS=Xenopus tropicalis
Align length 25
Score (bit) 29.6
E-value 4.8
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912806|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A12.
(145 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q0VA04|CQ071_XENTR UPF0487 protein C17orf71 homolog OS=Xenopu... 30 4.8

>sp|Q0VA04|CQ071_XENTR UPF0487 protein C17orf71 homolog OS=Xenopus
tropicalis PE=2 SV=1
Length = 915

Score = 29.6 bits (65), Expect = 4.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -3

Query: 86 HCVMQLHVIPKSGYGLQGHLNSPFL 12
HCV + H++PKSG ++ N P L
Sbjct: 496 HCVHKFHLLPKSGEKIEPERNPPIL 520


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912806|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_A12.
(145 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******