BP912812 |
Clone id |
YMU001_000023_B07 |
Library |
YMU01 |
Length |
575 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000023_B07. |
Accession |
BP912812 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2610Contig1 |
Sequence |
ACAATCCGTTGACCTTGACCAGTTCAATTATCGCCCATGCCTTCTGTTCAGTCTCCATAA CTGCACGAGCTCTCTTACGACCTATCTTTTTCATTTGAGAAGTCGATACGCTCCCAGAAT TTACAAGATCTGAGCGAAGCGTCAGATCCAAAAGTCCCATCACTCTTCACGACATCAAGT ATACGGGCAGTTACATGATCTCCAACTTTGACTTCCAAGTCTAGTTGATGATGTGTCACA AATCCAACAACATCCTTCAGATTCTGCACATTGACAATAACACCATATTCTTTGATATCT TGTATTTCCCCTTCTATACTTTTCCCACACCAATATCTTTTCCCCATTCCAACTCCGCTC CATCCGATTTGGAAGCTTGCAGTTCAGCAATCTTTTCCTCTTCAAGAAAATAACCCTTCA AGAAGGTCGTGTCTGTAGAGTAGCAATGTGATTGCTTCAAAGATAAATTGAATCTCCCAG CCAATAAATTTACCTCTAAAACCTTGGCTCGCACCGATTGTCCTACTGCAAAATGTTTGA ATGGGCTATGCACAAAGCCATCCAGTAACTGTGGA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9JZ44 |
Definition |
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B |
Align length |
103 |
Score (bit) |
31.6 |
E-value |
0.039 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912812|Adiantum capillus-veneris mRNA, clone: YMU001_000023_B07. (575 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria mening... 32 0.039 sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdc... 37 0.092 sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic OS=P... 37 0.092 sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium melilo... 29 0.14 sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDC... 35 0.35 sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD1... 34 0.46 sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexner... 31 0.81 sp|P0AG67|RS1_ECOLI 30S ribosomal protein S1 OS=Escherichia coli... 31 0.81 sp|P0AG68|RS1_ECOL6 30S ribosomal protein S1 OS=Escherichia coli... 31 0.81 sp|P0AG69|RS1_ECO57 30S ribosomal protein S1 OS=Escherichia coli... 31 0.81 sp|P14128|RS1_PROSP 30S ribosomal protein S1 (Fragment) OS=Provi... 31 0.83 sp|Q86B09|PMM2_DICDI Phosphomannomutase 2 OS=Dictyostelium disco... 33 1.0 sp|O14638|ENPP3_HUMAN Ectonucleotide pyrophosphatase/phosphodies... 33 1.0 sp|P51345|RR1_PORPU 30S ribosomal protein S1, chloroplastic OS=P... 33 1.3 sp|O06000|RS1H_BACC1 30S ribosomal protein S1 homolog OS=Bacillu... 32 2.3 sp|Q6IRM9|ZWILC_XENLA Protein zwilch homolog OS=Xenopus laevis G... 32 3.0 sp|Q8KEF9|SYFB_CHLTE Phenylalanyl-tRNA synthetase beta chain OS=... 31 3.9 sp|Q57581|IF2A_METJA Translation initiation factor 2 subunit alp... 31 5.1 sp|A2AG58|CX023_MOUSE Uncharacterized protein CXorf23 homolog OS... 31 5.1 sp|O33698|RS1_SYNE7 30S ribosomal protein S1 OS=Synechococcus el... 30 6.6 sp|P56008|RS1_HELPY 30S ribosomal protein S1 OS=Helicobacter pyl... 30 6.6 sp|O74835|RRP5_SCHPO rRNA biogenesis protein rrp5 OS=Schizosacch... 30 6.6 sp|Q3IUE5|SYV_NATPD Valyl-tRNA synthetase OS=Natronomonas pharao... 30 8.6 sp|Q6NDP1|RS1_RHOPA 30S ribosomal protein S1 OS=Rhodopseudomonas... 30 8.6 sp|A7HCH7|RPOB_ANADF DNA-directed RNA polymerase subunit beta OS... 30 8.6 sp|Q5E7L1|PNP_VIBF1 Polyribonucleotide nucleotidyltransferase OS... 30 8.6 sp|A0LE14|PNP_MAGSM Polyribonucleotide nucleotidyltransferase OS... 30 8.6 sp|P80870|GS13_BACSU General stress protein 13 OS=Bacillus subti... 30 8.6
>sp|Q9JZ44|RS1_NEIMB 30S ribosomal protein S1 OS=Neisseria meningitidis serogroup B GN=rpsA PE=1 SV=1 Length = 561
Score = 31.6 bits (70), Expect(2) = 0.039 Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 11/103 (10%) Frame = -1
Query: 362 WSGVGMGKRYWCGKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLE---------V 210 WSG + +RY G + G++ ++ +YG V ++ + + G V ++D V Sbjct: 268 WSG--LTRRYPQGTRLFGKVSNLTDYGAFVEIE--QGIEGLVHVSEMDWTNKNVHPSKVV 323
Query: 209 KVGDHVTARILDVVKSDGTFGSDASLRSCKF--WERIDFSNEK 87 ++GD V IL++ +G ++ C+ WE ++ K Sbjct: 324 QLGDEVEVMILEI--DEGRRRISLGMKQCQANPWEEFAANHNK 364
Score = 25.4 bits (54), Expect(2) = 0.039 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V P + VGQ V AKVL+ + R +L +KQ Sbjct: 229 VKHPSEVLEVGQEVEAKVLKFDQEKQRVSLGMKQ 262
>sp|Q6NS46|RRP5_MOUSE Protein RRP5 homolog OS=Mus musculus GN=Pdcd11 PE=2 SV=2 Length = 1862
Score = 36.6 bits (83), Expect = 0.092 Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 3/51 (5%) Frame = -2
Query: 562 DGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCY---STDTTFL 419 D FV +P +HF GQ+V AKV V+ R LSL+ S C S T+FL Sbjct: 763 DKFVTTPSEHFVEGQTVVAKVTNVDESKQRMLLSLRLSDCSLGDSASTSFL 813
>sp|Q1XDE2|RR1_PORYE 30S ribosomal protein S1, chloroplastic OS=Porphyra yezoensis GN=rps1 PE=3 SV=2 Length = 263
Score = 36.6 bits (83), Expect = 0.092 Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 5/62 (8%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVV-----GFVTHHQLDLEVKVGDHVTARILDVVKS 162 G IEG I I YG+ + V NLK +V Q+ + K+GD + A I+ V K Sbjct: 192 GNIIEGIINQITPYGLFIKVGNLKGLVHISEINIKNLEQISSQFKIGDTIKAVIIHVDKK 251
Query: 161 DG 156 G Sbjct: 252 QG 253
>sp|P14129|RS1_RHIME 30S ribosomal protein S1 OS=Rhizobium meliloti GN=rpsA PE=3 SV=2 Length = 568
Score = 29.3 bits (64), Expect(2) = 0.14 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -1
Query: 350 GMGKRYWCGKSIEGEIQDIKEYGVIVNVQ 264 G+G +Y GK I G + +I +YG V ++ Sbjct: 275 GIGAKYPVGKKISGTVTNITDYGAFVELE 303
Score = 25.8 bits (55), Expect(2) = 0.14 Identities = 10/34 (29%), Positives = 20/34 (58%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V+ P + +GQ V+ +++ +N R +L +KQ Sbjct: 234 VNHPSEILNIGQQVKVQIIRINQETHRISLGMKQ 267
>sp|Q14690|RRP5_HUMAN Protein RRP5 homolog OS=Homo sapiens GN=PDCD11 PE=1 SV=3 Length = 1871
Score = 34.7 bits (78), Expect = 0.35 Identities = 25/66 (37%), Positives = 32/66 (48%) Frame = -2
Query: 562 DGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAE 383 D FV S HF GQ+V AKV V+ R LSL+ S C D + L + + E Sbjct: 763 DKFVTSTSDHFVEGQTVAAKVTNVDEEKQRMLLSLRLSDCGLGDLA-ITSLLLLNQCLEE 821
Query: 382 LQASKS 365 LQ +S Sbjct: 822 LQGVRS 827
>sp|A7MB10|RRP5_BOVIN Protein RRP5 homolog OS=Bos taurus GN=PDCD11 PE=2 SV=1 Length = 1874
Score = 34.3 bits (77), Expect = 0.46 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 4/78 (5%) Frame = -2
Query: 568 LLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHC----YSTDTTFLKGYFLE 401 L D FV S HF GQ+V AKV V+ R LSL+ S C +T + L LE Sbjct: 759 LSDKFVTSTSDHFVEGQTVVAKVTNVDEEKQRMLLSLRLSDCTLGDLATTSLLLLSQCLE 818
Query: 400 EEKIAELQASKSDGAELE 347 E + S D ++ Sbjct: 819 ERQGVRSLMSNRDSVLIQ 836
>sp|P0AG70|RS1_SHIFL 30S ribosomal protein S1 OS=Shigella flexneri GN=rpsA PE=3 SV=1 Length = 557
Score = 31.2 bits (69), Expect(2) = 0.81 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%) Frame = -1
Query: 353 VGMGKRYWCGKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLE---------VKVG 201 V + KRY G + G + ++ +YG V ++ + V G V ++D V VG Sbjct: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVG 325
Query: 200 DHVTARILDVVKSDGTFGSDASLRSCKF--WERI-DFSNEKDR 81 D V +LD+ + L+ CK W++ + N+ DR Sbjct: 326 DVVEVMVLDIDEERRRI--SLGLKQCKANPWQQFAETHNKGDR 366
Score = 21.2 bits (43), Expect(2) = 0.81 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V P + VG + KVL+ + R +L LKQ Sbjct: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261
Score = 30.0 bits (66), Expect = 8.6 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQ-------NLKDVVGFVTHHQLDLEVKVGDHVTARILDV 171 G +EG+I+ I ++G+ + + +L D+ V + E K GD + A +L V Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422
>sp|P0AG67|RS1_ECOLI 30S ribosomal protein S1 OS=Escherichia coli (strain K12) GN=rpsA PE=1 SV=1 Length = 557
Score = 31.2 bits (69), Expect(2) = 0.81 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%) Frame = -1
Query: 353 VGMGKRYWCGKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLE---------VKVG 201 V + KRY G + G + ++ +YG V ++ + V G V ++D V VG Sbjct: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVG 325
Query: 200 DHVTARILDVVKSDGTFGSDASLRSCKF--WERI-DFSNEKDR 81 D V +LD+ + L+ CK W++ + N+ DR Sbjct: 326 DVVEVMVLDIDEERRRI--SLGLKQCKANPWQQFAETHNKGDR 366
Score = 21.2 bits (43), Expect(2) = 0.81 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V P + VG + KVL+ + R +L LKQ Sbjct: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261
Score = 30.0 bits (66), Expect = 8.6 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQ-------NLKDVVGFVTHHQLDLEVKVGDHVTARILDV 171 G +EG+I+ I ++G+ + + +L D+ V + E K GD + A +L V Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422
>sp|P0AG68|RS1_ECOL6 30S ribosomal protein S1 OS=Escherichia coli O6 GN=rpsA PE=3 SV=1 Length = 557
Score = 31.2 bits (69), Expect(2) = 0.81 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%) Frame = -1
Query: 353 VGMGKRYWCGKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLE---------VKVG 201 V + KRY G + G + ++ +YG V ++ + V G V ++D V VG Sbjct: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVG 325
Query: 200 DHVTARILDVVKSDGTFGSDASLRSCKF--WERI-DFSNEKDR 81 D V +LD+ + L+ CK W++ + N+ DR Sbjct: 326 DVVEVMVLDIDEERRRI--SLGLKQCKANPWQQFAETHNKGDR 366
Score = 21.2 bits (43), Expect(2) = 0.81 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V P + VG + KVL+ + R +L LKQ Sbjct: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261
Score = 30.0 bits (66), Expect = 8.6 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQ-------NLKDVVGFVTHHQLDLEVKVGDHVTARILDV 171 G +EG+I+ I ++G+ + + +L D+ V + E K GD + A +L V Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422
>sp|P0AG69|RS1_ECO57 30S ribosomal protein S1 OS=Escherichia coli O157:H7 GN=rpsA PE=3 SV=1 Length = 557
Score = 31.2 bits (69), Expect(2) = 0.81 Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 12/103 (11%) Frame = -1
Query: 353 VGMGKRYWCGKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLE---------VKVG 201 V + KRY G + G + ++ +YG V ++ + V G V ++D V VG Sbjct: 268 VAIAKRYPEGTKLTGRVTNLTDYGCFVEIE--EGVEGLVHVSEMDWTNKNIHPSKVVNVG 325
Query: 200 DHVTARILDVVKSDGTFGSDASLRSCKF--WERI-DFSNEKDR 81 D V +LD+ + L+ CK W++ + N+ DR Sbjct: 326 DVVEVMVLDIDEERRRI--SLGLKQCKANPWQQFAETHNKGDR 366
Score = 21.2 bits (43), Expect(2) = 0.81 Identities = 12/34 (35%), Positives = 17/34 (50%) Frame = -2
Query: 553 VHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQ 452 V P + VG + KVL+ + R +L LKQ Sbjct: 228 VKHPSEIVNVGDEITVKVLKFDRERTRVSLGLKQ 261
Score = 30.0 bits (66), Expect = 8.6 Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 7/59 (11%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQ-------NLKDVVGFVTHHQLDLEVKVGDHVTARILDV 171 G +EG+I+ I ++G+ + + +L D+ V + E K GD + A +L V Sbjct: 364 GDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVLQV 422
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A9SPX0 |
Definition |
tr|A9SPX0|A9SPX0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
Align length |
77 |
Score (bit) |
86.3 |
E-value |
3.0e-36 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912812|Adiantum capillus-veneris mRNA, clone: YMU001_000023_B07. (575 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|A9SPX0|A9SPX0_PHYPA Predicted protein OS=Physcomitrella paten... 86 3e-36 tr|A7PW23|A7PW23_VITVI Chromosome chr8 scaffold_34, whole genome... 77 2e-22 tr|A3BHL4|A3BHL4_ORYSJ Putative uncharacterized protein OS=Oryza... 61 3e-18 tr|B8B884|B8B884_ORYSI Putative uncharacterized protein OS=Oryza... 61 3e-18 tr|Q7XB75|Q7XB75_ORYSJ Putative pre-rRNA processing protein RRP5... 61 3e-18 tr|Q9SF02|Q9SF02_ARATH Putative pre-rRNA processing protein, 5' ... 71 5e-11 tr|Q9LHM6|Q9LHM6_ARATH Pre-rRNA processing protein RRP5 OS=Arabi... 71 5e-11 tr|Q9C7B6|Q9C7B6_ARATH RRNA biogenesis protein, putative, 3' par... 71 5e-11 tr|Q010S4|Q010S4_OSTTA rRNA processing protein Rrp5 (ISS) OS=Ost... 40 3e-05 tr|A8IBR0|A8IBR0_CHLRE RNA binding rRNA processing protein OS=Ch... 47 7e-04 tr|A5AKW3|A5AKW3_VITVI Putative uncharacterized protein OS=Vitis... 47 7e-04 tr|B6K2R4|B6K2R4_SCHJP U3 snoRNP-associated protein Rrp5 OS=Schi... 34 0.055 tr|Q1NNS6|Q1NNS6_9DELT Ribosomal protein S1 OS=delta proteobacte... 33 0.058 tr|Q7NTK8|Q7NTK8_CHRVO 30S ribosomal protein S1 OS=Chromobacteri... 33 0.058 tr|Q1NPI0|Q1NPI0_9DELT Ribosomal protein S1 (Fragment) OS=delta ... 33 0.058 tr|A4S384|A4S384_OSTLU Predicted protein OS=Ostreococcus lucimar... 40 0.070 tr|B2IKW4|B2IKW4_BEII9 Ribosomal protein S1 OS=Beijerinckia indi... 33 0.096 tr|Q7NDT8|Q7NDT8_GLOVI Glr4144 protein OS=Gloeobacter violaceus ... 40 0.12 tr|Q82TD6|Q82TD6_NITEU Ribosomal protein S1:S1 RNA binding domai... 34 0.16 tr|Q0AIZ3|Q0AIZ3_NITEC SSU ribosomal protein S1P OS=Nitrosomonas... 34 0.21 tr|A5V0B5|A5V0B5_ROSS1 RNA binding S1 domain protein OS=Roseifle... 30 0.21 tr|B8EP59|B8EP59_METSI Ribosomal protein S1 OS=Methylocella silv... 32 0.27 tr|A2WBS0|A2WBS0_9BURK Ribosomal protein S1 OS=Burkholderia dolo... 31 0.34 tr|A2VRY7|A2VRY7_9BURK Ribosomal protein S1 OS=Burkholderia ceno... 31 0.34 tr|Q46Y53|Q46Y53_RALEJ SSU ribosomal protein S1P OS=Ralstonia eu... 32 0.34 tr|B2JF06|B2JF06_BURP8 Ribosomal protein S1 OS=Burkholderia phym... 31 0.34 tr|Q13VC4|Q13VC4_BURXL SSU ribosomal protein S1P OS=Burkholderia... 31 0.34 tr|B2T628|B2T628_BURPP Ribosomal protein S1 OS=Burkholderia phyt... 31 0.34 tr|B5WMW9|B5WMW9_9BURK Ribosomal protein S1 OS=Burkholderia sp. ... 31 0.34 tr|B1G2W0|B1G2W0_9BURK Ribosomal protein S1 OS=Burkholderia gram... 31 0.34
>tr|A9SPX0|A9SPX0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_133341 PE=4 SV=1 Length = 1785
Score = 86.3 bits (212), Expect(3) = 3e-36 Identities = 43/77 (55%), Positives = 56/77 (72%) Frame = -2
Query: 574 PQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEE 395 PQ+ D FV P HF+VGQSVRA+VLEV G+F+L LKQS C+STD + ++GYFLEE+ Sbjct: 670 PQVADEFVSDPSNHFSVGQSVRAQVLEVYHDTGKFSLCLKQSVCFSTDVSLIQGYFLEED 729
Query: 394 KIAELQASKSDGAELEW 344 KI E S+ ++LEW Sbjct: 730 KIVE----ASEASDLEW 742
Score = 75.5 bits (184), Expect(3) = 3e-36 Identities = 36/56 (64%), Positives = 44/56 (78%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLEVKVGDHVTARILDVVKSD 159 G GE+Q+IK+YGVIV + N KDVVGFVTH+QL V+VGD V AR+LDVVK+D Sbjct: 749 GACTGGEVQEIKDYGVIVKLPNYKDVVGFVTHYQLGTPVEVGDSVQARVLDVVKAD 804
Score = 34.7 bits (78), Expect(3) = 3e-36 Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 2/49 (4%) Frame = -2
Query: 154 LLDLTLRSDLVNSGSVSTSQMKKIGRKRARAVM--ETEQKAWAIIELVK 14 ++DLT+R +L+ +++ K+ +KR+ VM E QK A+IELVK Sbjct: 806 IVDLTVRPELLQVNKHDSTKKKEKNKKRSHPVMALELHQKVSAVIELVK 854
Score = 37.0 bits (84), Expect = 0.77 Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 8/83 (9%) Frame = -2
Query: 571 QLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTF--------LK 416 ++ D + KH+ VG VRA+VL+V+ R +L LK+S+ +T+T +K Sbjct: 1354 EVADHYFKDIDKHYKVGDRVRARVLKVDNTKQRISLGLKESYFSNTETHVQPVTEEDDMK 1413
Query: 415 GYFLEEEKIAELQASKSDGAELE 347 E+E + + + S+ D + E Sbjct: 1414 VTNEEDELVDDCEESEEDDVDEE 1436
>tr|A7PW23|A7PW23_VITVI Chromosome chr8 scaffold_34, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00025446001 PE=4 SV=1 Length = 1799
Score = 77.4 bits (189), Expect(2) = 2e-22 Identities = 38/67 (56%), Positives = 50/67 (74%) Frame = -2
Query: 544 PFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKS 365 P + F +GQSVR+ +L+VN GR LSLKQS C STD +F++ YFL EEKIA+LQ S S Sbjct: 700 PSEAFFIGQSVRSNILDVNSETGRITLSLKQSCCSSTDASFIQEYFLLEEKIAKLQLSDS 759
Query: 364 DGAELEW 344 + +EL+W Sbjct: 760 EHSELKW 766
Score = 52.0 bits (123), Expect(2) = 2e-22 Identities = 25/56 (44%), Positives = 37/56 (66%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQLDLEVKVGDHVTARILDVVKSD 159 G IEG+I D K++GV+++ + DV GF+TH+QL E G V A +LDV K++ Sbjct: 773 GTVIEGKIHDAKDFGVVISFEKYNDVFGFITHYQLTAE--RGSTVQAVVLDVAKTE 826
>tr|A3BHL4|A3BHL4_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_022536 PE=4 SV=1 Length = 1912
Score = 60.8 bits (146), Expect(2) = 3e-18 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVR+ +L VN + R LSL+QS C S D +F++GYFL ++KI EL+ S + Sbjct: 792 FYVGQSVRSHILNVNAESARVKLSLQQSMCSSADCSFVQGYFLLDQKITELKYSDPSSSF 851
Query: 352 LEW 344 +W Sbjct: 852 HDW 854
Score = 54.7 bits (130), Expect(2) = 3e-18 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQL-DLEVKVGDHVTARILDVVKSDG 156 G +EGE+ I+EYGVI+N Q+ DVVG + HHQL D V+VG V ++D+ SDG Sbjct: 861 GNLVEGEVGAIEEYGVILNFQSHPDVVGLIEHHQLGDSSVEVGSSVKGLVIDL--SDG 916
>tr|B8B884|B8B884_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25303 PE=4 SV=1 Length = 1848
Score = 60.8 bits (146), Expect(2) = 3e-18 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVR+ +L VN + R LSL+QS C S D +F++GYFL ++KI EL+ S + Sbjct: 786 FYVGQSVRSHILNVNAESARVKLSLQQSMCSSADCSFVQGYFLLDQKITELKYSDPSSSF 845
Query: 352 LEW 344 +W Sbjct: 846 HDW 848
Score = 54.7 bits (130), Expect(2) = 3e-18 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQL-DLEVKVGDHVTARILDVVKSDG 156 G +EGE+ I+EYGVI+N Q+ DVVG + HHQL D V+VG V ++D+ SDG Sbjct: 855 GNLVEGEVGAIEEYGVILNFQSHPDVVGLIEHHQLGDSSVEVGSSVKGLVIDL--SDG 910
>tr|Q7XB75|Q7XB75_ORYSJ Putative pre-rRNA processing protein RRP5 OS=Oryza sativa subsp. japonica GN=P0431A02.12 PE=4 SV=1 Length = 1668
Score = 60.8 bits (146), Expect(2) = 3e-18 Identities = 30/63 (47%), Positives = 42/63 (66%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVR+ +L VN + R LSL+QS C S D +F++GYFL ++KI EL+ S + Sbjct: 571 FYVGQSVRSHILNVNAESARVKLSLQQSMCSSADCSFVQGYFLLDQKITELKYSDPSSSF 630
Query: 352 LEW 344 +W Sbjct: 631 HDW 633
Score = 54.7 bits (130), Expect(2) = 3e-18 Identities = 29/58 (50%), Positives = 39/58 (67%), Gaps = 1/58 (1%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQL-DLEVKVGDHVTARILDVVKSDG 156 G +EGE+ I+EYGVI+N Q+ DVVG + HHQL D V+VG V ++D+ SDG Sbjct: 640 GNLVEGEVGAIEEYGVILNFQSHPDVVGLIEHHQLGDSSVEVGSSVKGLVIDL--SDG 695
>tr|Q9SF02|Q9SF02_ARATH Putative pre-rRNA processing protein, 5' partial (Fragment) OS=Arabidopsis thaliana GN=F26K24.26 PE=4 SV=1 Length = 1111
Score = 70.9 bits (172), Expect = 5e-11 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVRA +++VN R LSLKQS C S D +F++ YFL +EKI++LQ+S ++ Sbjct: 13 FFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSD 72
Query: 352 LEWXXXXXXXXXXXXXXXXXKNM-VLLSMCRI*RML--LDL*HIIN*TWKSKLEIM*LPV 182 W ++ V+++ I +L + H+ T + V Sbjct: 73 CSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGGATLVPGSVVN--AV 130
Query: 181 YLMS*RVMGLLDLTLRSDLVNSGSVSTSQMKKIGRKRA-RAVMETEQKAWAIIELVK 14 L R L+DL+LR +L+N+ + S K RKR +E Q+ A++E+VK Sbjct: 131 VLDISRAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVK 187
>tr|Q9LHM6|Q9LHM6_ARATH Pre-rRNA processing protein RRP5 OS=Arabidopsis thaliana PE=4 SV=1 Length = 1765
Score = 70.9 bits (172), Expect = 5e-11 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVRA +++VN R LSLKQS C S D +F++ YFL +EKI++LQ+S ++ Sbjct: 667 FFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSD 726
Query: 352 LEWXXXXXXXXXXXXXXXXXKNM-VLLSMCRI*RML--LDL*HIIN*TWKSKLEIM*LPV 182 W ++ V+++ I +L + H+ T + V Sbjct: 727 CSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGGATLVPGSVVN--AV 784
Query: 181 YLMS*RVMGLLDLTLRSDLVNSGSVSTSQMKKIGRKRA-RAVMETEQKAWAIIELVK 14 L R L+DL+LR +L+N+ + S K RKR +E Q+ A++E+VK Sbjct: 785 VLDISRAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVK 841
>tr|Q9C7B6|Q9C7B6_ARATH RRNA biogenesis protein, putative, 3' partial; 75505-85642 (Fragment) OS=Arabidopsis thaliana GN=T21B14.19 PE=4 SV=1 Length = 1396
Score = 70.9 bits (172), Expect = 5e-11 Identities = 57/177 (32%), Positives = 89/177 (50%), Gaps = 4/177 (2%) Frame = -2
Query: 532 FAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEEKIAELQASKSDGAE 353 F VGQSVRA +++VN R LSLKQS C S D +F++ YFL +EKI++LQ+S ++ Sbjct: 797 FFVGQSVRANIVDVNQEKSRITLSLKQSSCASVDASFVQEYFLMDEKISDLQSSDITKSD 856
Query: 352 LEWXXXXXXXXXXXXXXXXXKNM-VLLSMCRI*RML--LDL*HIIN*TWKSKLEIM*LPV 182 W ++ V+++ I +L + H+ T + V Sbjct: 857 CSWVEKFSIGSLIKGTIQEQNDLGVVVNFDNINNVLGFIPQHHMGGATLVPGSVVN--AV 914
Query: 181 YLMS*RVMGLLDLTLRSDLVNSGSVSTSQMKKIGRKRA-RAVMETEQKAWAIIELVK 14 L R L+DL+LR +L+N+ + S K RKR +E Q+ A++E+VK Sbjct: 915 VLDISRAERLVDLSLRPELLNNLTKEVSNSSKKKRKRGISKELEVHQRVSAVVEIVK 971
>tr|Q010S4|Q010S4_OSTTA rRNA processing protein Rrp5 (ISS) OS=Ostreococcus tauri GN=Ot10g00010 PE=4 SV=1 Length = 1947
Score = 40.0 bits (92), Expect(2) = 3e-05 Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%) Frame = -1
Query: 326 GKSIEGEIQDIKEYGVIVNVQNLKDVVGFVTHHQL--DLEVKVGDHVTARILDVVKSDGT 153 G ++ + + KEYGV++++ + VG VT HQL +E + GD V +LDV + +G Sbjct: 894 GTWMDVTVNETKEYGVLMDMAIDSNAVGLVTPHQLPESVEFESGDAVKCYVLDVSRREGV 953
Query: 152 FGSDASLRS 126 D +RS Sbjct: 954 V--DMGMRS 960
Score = 31.2 bits (69), Expect(2) = 3e-05 Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 4/74 (5%) Frame = -2
Query: 571 QLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAG--RFNLSLKQSHCYS--TDTTFLKGYFL 404 QL+DG F VG++V A VL V+ R +LSLK S S +D ++ +F Sbjct: 807 QLVDGVSADIHDMFPVGKTVNALVLAVDTSTSPPRLSLSLKLSATSSPLSDAPLIRSFFN 866
Query: 403 EEEKIAELQASKSD 362 + E + E A+ D Sbjct: 867 DIELLDERVANADD 880
>tr|A8IBR0|A8IBR0_CHLRE RNA binding rRNA processing protein OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_165854 PE=4 SV=1 Length = 1280
Score = 47.0 bits (110), Expect = 7e-04 Identities = 30/71 (42%), Positives = 39/71 (54%) Frame = -2
Query: 574 PQLLDGFVHSPFKHFAVGQSVRAKVLEVNLLAGRFNLSLKQSHCYSTDTTFLKGYFLEEE 395 PQL D FV +P + FA GQSVR V V+ RF + L+ S S+D +L YF E Sbjct: 401 PQLSDVFVSNPRELFAEGQSVRCLVATVDAARQRFTVLLRPSATASSDAAYLIDYFRE-- 458
Query: 394 KIAELQASKSD 362 +A LQ + D Sbjct: 459 -MAALQVLRGD 468
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