BP912815 |
Clone id |
YMU001_000023_B12 |
Library |
YMU01 |
Length |
503 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000023_B12. |
Accession |
BP912815 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
TTTTTTTTTTTTTTTTGATCTCTAATGTTGTTCCTGCAATCCTTTAATTGATTGTTAATA CAAGTTTGGCCTCAATATAATCATGTACAAAATCGAGAATGTTTTAAACACTAGCTTTTA ATATTTTGTACAATGGCAAAATTGTGAGGTATCTCTGCTATAAAATCCTCATTGTGTGGG AGAGGTGGCTATGAGGTAATGCTTCGCTCAAGGATGCTGCAAGCCTCCGCGTCTGCCAGC CTTGTCTCAGAGGCAGTGGCACTTTGGGCCACTGCAATGGCCTTGATAAGGGCACCTTCT TTCAAGGCTGCGCTCTTCATCTCATCTGCCTCTGGTGCCCACTTCACTACAAGCAACACG ATGTGAACAGCATGGTGAGCTGCCCTCTCGGACACCGAACTCATATGCTTCACTACTGTC GTTAGAATGCTTGGCTCTGCTGCAACTGTTGCCCGGCCTTCCGCGCATTGGCAGATAACC TCCAAAGCTCTTAATATCATCTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9Y3Q7 |
Definition |
sp|Q9Y3Q7|ADA18_HUMAN ADAM 18 OS=Homo sapiens |
Align length |
77 |
Score (bit) |
37.4 |
E-value |
0.036 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B4Q2R2 |
Definition |
tr|B4Q2R2|B4Q2R2_DROYA GE16123 OS=Drosophila yakuba |
Align length |
67 |
Score (bit) |
37.0 |
E-value |
0.5 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912815|Adiantum capillus-veneris mRNA, clone: YMU001_000023_B12. (487 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B4Q2R2|B4Q2R2_DROYA GE16123 OS=Drosophila yakuba GN=GE16123 P... 37 0.50 tr|Q2QXD4|Q2QXD4_ORYSJ Os12g0161100 protein OS=Oryza sativa subs... 37 0.65 tr|A9TX73|A9TX73_PHYPA Predicted protein (Fragment) OS=Physcomit... 37 0.65 tr|Q4R6P9|Q4R6P9_MACFA Testis cDNA, clone: QtsA-17441, similar t... 36 0.82 tr|A7NUB3|A7NUB3_VITVI Chromosome chr18 scaffold_1, whole genome... 36 0.85 tr|A9NXN2|A9NXN2_PICSI Putative uncharacterized protein OS=Picea... 36 1.1 tr|Q259M5|Q259M5_ORYSA H0723C07.7 protein OS=Oryza sativa GN=H07... 35 1.4 tr|Q9VUZ4|Q9VUZ4_DROME CG5151, isoform A OS=Drosophila melanogas... 35 2.4 tr|Q7KUP1|Q7KUP1_DROME CG5151, isoform B OS=Drosophila melanogas... 35 2.4 tr|B4QLU9|B4QLU9_DROSI GD12510 OS=Drosophila simulans GN=GD12510... 35 2.4 tr|B4PI28|B4PI28_DROYA GE22583 OS=Drosophila yakuba GN=GE22583 P... 35 2.4 tr|B4HJ26|B4HJ26_DROSE GM24441 OS=Drosophila sechellia GN=GM2444... 35 2.4 tr|B3NI56|B3NI56_DROER GG13492 OS=Drosophila erecta GN=GG13492 P... 35 2.4 tr|Q0V3H4|Q0V3H4_PHANO Putative uncharacterized protein OS=Phaeo... 35 2.5 tr|Q7XTM1|Q7XTM1_ORYSJ Os04g0686000 protein OS=Oryza sativa subs... 34 4.2 tr|A2ANM0|A2ANM0_MOUSE Odd Oz/ten-m homolog 1 (Drosophila) OS=Mu... 33 5.3 tr|A2ANL9|A2ANL9_MOUSE Odd Oz/ten-m homolog 1 (Drosophila) OS=Mu... 33 5.3 tr|B3M953|B3M953_DROAN GF10318 OS=Drosophila ananassae GN=GF1031... 33 5.3 tr|B7ZMH4|B7ZMH4_HUMAN ODZ1 protein OS=Homo sapiens GN=ODZ1 PE=2... 33 5.3 tr|B2RTR5|B2RTR5_HUMAN ODZ1 protein OS=Homo sapiens GN=ODZ1 PE=2... 33 5.3 tr|Q8S5X3|Q8S5X3_ORYSJ Putative uncharacterized protein OJ1175C1... 33 5.5 tr|Q10PI9|Q10PI9_ORYSJ cDNA clone:J013146E12, full insert sequen... 33 5.5 tr|Q0DTQ5|Q0DTQ5_ORYSJ Os03g0232600 protein OS=Oryza sativa subs... 33 5.5 tr|B8AJM7|B8AJM7_ORYSI Putative uncharacterized protein OS=Oryza... 33 5.5 tr|A6N0D6|A6N0D6_ORYSI Ubiquitin-protein ligase (Fragment) OS=Or... 33 5.5 tr|A5B995|A5B995_VITVI Putative uncharacterized protein OS=Vitis... 33 5.5 tr|A3AFT0|A3AFT0_ORYSJ Putative uncharacterized protein OS=Oryza... 33 5.5 tr|A9RVE2|A9RVE2_PHYPA Predicted protein OS=Physcomitrella paten... 33 7.0 tr|Q6ILG3|Q6ILG3_DROME HDC09484 OS=Drosophila melanogaster GN=HD... 33 7.0 tr|A7QHS6|A7QHS6_VITVI Chromosome chr8 scaffold_99, whole genome... 33 7.2
>tr|B4Q2R2|B4Q2R2_DROYA GE16123 OS=Drosophila yakuba GN=GE16123 PE=4 SV=1 Length = 346
Score = 37.0 bits (84), Expect = 0.50 Identities = 21/67 (31%), Positives = 35/67 (52%) Frame = -1
Query: 307 EMKSAALKEGALIKAIAVAQSATASETRLADAEACSILERSITS*PPLPHNEDFIAEIPH 128 E++S+A E A A A A +A + L D +A L+ +T+ P PH+ I + H Sbjct: 117 EIRSSAAAEAAAANAAAAAAAAATGDNDL-DVDALEELDCPLTNHPSPPHSHSHIHNLSH 175
Query: 127 NFAIVQN 107 + + +QN Sbjct: 176 SHSQIQN 182
>tr|Q2QXD4|Q2QXD4_ORYSJ Os12g0161100 protein OS=Oryza sativa subsp. japonica GN=Os12g0161100 PE=4 SV=1 Length = 437
Score = 36.6 bits (83), Expect = 0.65 Identities = 16/38 (42%), Positives = 24/38 (63%) Frame = -1
Query: 487 EMILRALEVICQCAEGRATVAAEPSILTTVVKHMSSVS 374 E ++ L +C CAEGRA VA+ P+ +T V + + VS Sbjct: 322 EAVMALLAELCACAEGRAAVASHPAGITVVARRVLRVS 359
>tr|A9TX73|A9TX73_PHYPA Predicted protein (Fragment) OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_32641 PE=4 SV=1 Length = 388
Score = 36.6 bits (83), Expect = 0.65 Identities = 21/98 (21%), Positives = 44/98 (44%) Frame = -1
Query: 487 EMILRALEVICQCAEGRATVAAEPSILTTVVKHMSSVSERXXXXXXXXXXXXVKWAPEAD 308 ++ LE++ CAEGR ++ + + +VK M VS+R + +A + Sbjct: 291 DLAFEVLEIMANCAEGREAISNHATAIPMIVKSMLGVSQRVTECAVSTLWVVLSYASNRN 350
Query: 307 EMKSAALKEGALIKAIAVAQSATASETRLADAEACSIL 194 + + AL+ GA + + S + T+ ++ +L Sbjct: 351 VI-NTALQAGAFTNLLVLLPSECSQRTKQKARDSLKLL 387
>tr|Q4R6P9|Q4R6P9_MACFA Testis cDNA, clone: QtsA-17441, similar to human a disintegrin and metalloproteinase domain 18 (ADAM18),mRNA, RefSeq: NM_014237.1 OS=Macaca fascicularis PE=2 SV=1 Length = 523
Score = 36.2 bits (82), Expect = 0.82 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = -3
Query: 377 VREGSSPCCSHRVACSEVGTRGR*DEERSLERRCPYQGHCSGPKCHCL*DKAGRRGGL 204 V+ GS PCC+ + S VGT R +S++ C + +C+G C+ D G L Sbjct: 361 VKCGSGPCCTSKCELSIVGTPCR----KSVDPECDFTEYCNGTSSDCVPDTYALNGHL 414
>tr|A7NUB3|A7NUB3_VITVI Chromosome chr18 scaffold_1, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00014982001 PE=4 SV=1 Length = 452
Score = 36.2 bits (82), Expect = 0.85 Identities = 29/104 (27%), Positives = 44/104 (42%) Frame = -1
Query: 487 EMILRALEVICQCAEGRATVAAEPSILTTVVKHMSSVSERXXXXXXXXXXXXVKWAPEAD 308 E+ L LEV+ +GR + P+++ VVK + VSE K APE Sbjct: 337 ELALYILEVLSTLPQGRLALKDCPNMIPNVVKLLMRVSESCTQLALAILSAVCKLAPE-- 394
Query: 307 EMKSAALKEGALIKAIAVAQSATASETRLADAEACSILERSITS 176 E S A++ G K + V QS + AE + + T+ Sbjct: 395 ECASLAVEAGLAAKLLLVIQSGCNPVLKQRAAELLKLCSLNYTA 438
>tr|A9NXN2|A9NXN2_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 417
Score = 35.8 bits (81), Expect = 1.1 Identities = 22/88 (25%), Positives = 42/88 (47%) Frame = -1
Query: 487 EMILRALEVICQCAEGRATVAAEPSILTTVVKHMSSVSERXXXXXXXXXXXXVKWAPEAD 308 E +L L+++C+CAEGRAT + ++ K + VS+ K++P Sbjct: 300 EKMLCLLDILCECAEGRATTIDHAMGIASISKKIFRVSQVATEKAIRILWSLCKFSP-TP 358
Query: 307 EMKSAALKEGALIKAIAVAQSATASETR 224 + + ++ GA+ K + Q S+T+ Sbjct: 359 RLLNEMVQIGAVYKLCVLLQLECTSKTK 386
>tr|Q259M5|Q259M5_ORYSA H0723C07.7 protein OS=Oryza sativa GN=H0723C07.7 PE=4 SV=1 Length = 413
Score = 35.4 bits (80), Expect = 1.4 Identities = 34/112 (30%), Positives = 51/112 (45%), Gaps = 2/112 (1%) Frame = -1
Query: 487 EMILRALEVICQCAEGRATVAAEPSILTTVVKHMSSVSERXXXXXXXXXXXXVKWAPEAD 308 E+ L AL+ +C CAEGRA + + + + V + + VSE + A A Sbjct: 295 ELALAALDRMCGCAEGRAALVSHGAGVAVVGRKVLRVSEVASEKAVRVLRSVARHAATAA 354
Query: 307 EMKSAALKEGALIKAIAVAQSATASE-TRLADAEACSILERSITS*PPL-PH 158 ++ A + GA+ K VAQS E TR E + R+ + P L PH Sbjct: 355 VVQEMA-QTGAVEKLCVVAQSEQCGERTRERARETLRLHARAWRNSPCLQPH 405
>tr|Q9VUZ4|Q9VUZ4_DROME CG5151, isoform A OS=Drosophila melanogaster GN=CG5151 PE=2 SV=3 Length = 493
Score = 34.7 bits (78), Expect = 2.4 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -3
Query: 437 GNSCSRAK-HSNDSSEAYEFGVREGSSPCCSHRVAC--SEVGTRGR*DEERSLERRCPYQ 267 G+SCS + HSND + Y++ +++ +P C H V SE G ++R L+ R YQ Sbjct: 173 GSSCSSLQSHSNDHHQHYQYQLQQQQTPRCPHHVPLPDSEYG------QDRHLQIRSSYQ 226
>tr|Q7KUP1|Q7KUP1_DROME CG5151, isoform B OS=Drosophila melanogaster GN=CG5151 PE=2 SV=1 Length = 695
Score = 34.7 bits (78), Expect = 2.4 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -3
Query: 437 GNSCSRAK-HSNDSSEAYEFGVREGSSPCCSHRVAC--SEVGTRGR*DEERSLERRCPYQ 267 G+SCS + HSND + Y++ +++ +P C H V SE G ++R L+ R YQ Sbjct: 375 GSSCSSLQSHSNDHHQHYQYQLQQQQTPRCPHHVPLPDSEYG------QDRHLQIRSSYQ 428
>tr|B4QLU9|B4QLU9_DROSI GD12510 OS=Drosophila simulans GN=GD12510 PE=4 SV=1 Length = 697
Score = 34.7 bits (78), Expect = 2.4 Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 3/60 (5%) Frame = -3
Query: 437 GNSCSRAK-HSNDSSEAYEFGVREGSSPCCSHRVAC--SEVGTRGR*DEERSLERRCPYQ 267 G+SCS + HSND + Y++ +++ +P C H V SE G ++R L+ R YQ Sbjct: 377 GSSCSSLQSHSNDHHQHYQYQLQQQQTPRCPHHVPLPDSEYG------QDRHLQIRSSYQ 430
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