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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912825
Clone id YMU001_000023_C11
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CGGGTGAGTAACGCGTAAGAACCTGCCCCTGGGAGGGGTACAACGGCTGGAAACGGTTGC
TAATACCCCATACGCTGAGGAGCAAAAGGGATGGATCCGCCCAAGGAGGGGCTTGCGTCT
GATTAGCTTGTTGGTGAGGCAATGGTTTACCAAGGCAACGATCAGTAGCTGGTCTGAGAG
GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG
GAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGCAGAAGGCTCA
CGGGTCGTAAACTCCTTTTCTCAGAGAAGAAGCAGTGACGGTATCTGAGGAATAAGCATC
GGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGGGGATGCAAGCGTTATCCGGAATGAT
TGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTCCGCTGTCAAATCCCAGAGCTCAACC
CCGGACAGGCGATGGAAACTACTGGGCTGGAGTACGGTAGGGGCGGAGGGAATTTCCGGT
GGAGCGGTGAAA
■■Homology search results ■■ -
sp_hit_id Q9P281
Definition sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens
Align length 53
Score (bit) 31.2
E-value 3.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912825|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C11.
         (552 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing prot...    31   3.5  
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ...    30   7.8  

>sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1
            OS=Homo sapiens GN=BAHCC1 PE=1 SV=3
          Length = 2608

 Score = 31.2 bits (69), Expect = 3.5
 Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -3

Query: 319  KRSLRPVSLLPPRGIAPSGFRPLRKIPHCCLP*E-SGPCLSPSVADHPLRPAT 164
            K + +PV+L P    APS      K+P CC P +   P  SP+    P  P T
Sbjct: 965  KSTHKPVALTPTAPGAPSPAAGPTKLPPCCHPPDPKPPASSPTPPPRPSAPCT 1017


>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and
           nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1
          Length = 651

 Score = 30.0 bits (66), Expect = 7.8
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
 Frame = -3

Query: 286 PRGIAPSGFRPLRKIPHCCLP*ESGPCLSPSVADHPL------RPATDRCLGKPLPHQQA 125
           P G+ P G+RP R  P    P  +G    P+ A  P       RPA     G+P+P   A
Sbjct: 486 PAGMMPQGYRPAR--PPRGAPNAAGGPAPPAGARPPTGVNGAPRPAGQPVPGQPMPRGPA 543

Query: 124 NQTQAPPWAD 95
            +    P AD
Sbjct: 544 ARPAGRPEAD 553
tr_hit_id Q9F713
Definition tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum
Align length 121
Score (bit) 137.0
E-value 3.0e-31
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912825|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C11.
         (552 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum P...   137   3e-31
tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, who...   109   9e-23
tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. jap...   108   2e-22
tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas...   106   7e-22
tr|B3D9T0|B3D9T0_BURM1 Putative uncharacterized protein OS=Burkh...    93   8e-18
tr|A5Z511|A5Z511_9FIRM Putative uncharacterized protein OS=Eubac...    90   9e-17
tr|Q8CMB1|Q8CMB1_VIBVU Putative uncharacterized protein (Chlorob...    89   1e-16
tr|Q8D475|Q8D475_VIBVU Putative uncharacterized protein OS=Vibri...    88   3e-16
tr|A5KRL1|A5KRL1_9FIRM Putative uncharacterized protein OS=Rumin...    87   5e-16
tr|A9ZLL5|A9ZLL5_COXBU Putative uncharacterized protein (Fragmen...    87   8e-16
tr|B7PQ76|B7PQ76_IXOSC Putative uncharacterized protein (Fragmen...    83   1e-14
tr|Q86WC9|Q86WC9_HUMAN PG1 protein (Fragment) OS=Homo sapiens PE...    69   1e-14
tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein OS=Strep...    82   1e-14
tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein OS=Strep...    82   1e-14
tr|A5KRL2|A5KRL2_9FIRM Putative uncharacterized protein OS=Rumin...    80   7e-14
tr|A5KR94|A5KR94_9FIRM Putative uncharacterized protein OS=Rumin...    79   2e-13
tr|B6QWP6|B6QWP6_9RHOB Putative uncharacterized protein OS=Pseud...    76   1e-12
tr|A5C517|A5C517_VITVI Putative uncharacterized protein OS=Vitis...    75   2e-12
tr|A5ZYU0|A5ZYU0_9FIRM Putative uncharacterized protein OS=Rumin...    72   2e-11
tr|Q8DEV3|Q8DEV3_VIBVU Putative uncharacterized protein OS=Vibri...    71   3e-11
tr|A7QBS3|A7QBS3_VITVI Chromosome chr1 scaffold_75, whole genome...    45   8e-10
tr|Q85WW0|Q85WW0_PINKO ORF40s OS=Pinus koraiensis PE=4 SV=1            65   3e-09
tr|B7R8V3|B7R8V3_9THEO Putative uncharacterized protein OS=Carbo...    63   1e-08
tr|A1YSF7|A1YSF7_STRSU Putative uncharacterized protein (Fragmen...    62   2e-08
tr|A1FB49|A1FB49_VIBCH Putative uncharacterized protein OS=Vibri...    61   3e-08
tr|Q4HIX0|Q4HIX0_CAMLA Putative uncharacterized protein OS=Campy...    61   4e-08
tr|A4QMA9|A4QMA9_PINKO ORF40t OS=Pinus koraiensis PE=4 SV=1            61   4e-08
tr|O57956|O57956_PYRHO Putative uncharacterized protein PH0217 O...    59   1e-07
tr|B5IUJ1|B5IUJ1_9EURY Putative uncharacterized protein OS=Therm...    47   2e-07
tr|Q9Y1P3|Q9Y1P3_BRUMA Putative uncharacterized protein (Fragmen...    58   3e-07

>tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum PE=4
           SV=1
          Length = 121

 Score =  137 bits (346), Expect = 3e-31
 Identities = 76/121 (62%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
 Frame = -1

Query: 444 PPTDALRPIIPDNACIPCLTAAAGTELADAYSSDTVTA-----SSLRKGVYDP*AFCLHA 280
           PP   L P+ PDNAC PC+TAAAGTELA AYS  TVTA     SS  KG Y P  F +HA
Sbjct: 1   PPAHPLHPVNPDNACHPCITAAAGTELAVAYSQGTVTAGKPTSSSPAKGFYIPKNFIIHA 60

Query: 279 ALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLTNKLIRRKPLLG 100
           ALLRQAFAHC  F TAASRRSL RVSVP+WLIILSDQL +V LV    TN L+  + +  
Sbjct: 61  ALLRQAFAHCAIFLTAASRRSLDRVSVPMWLIILSDQLSVVGLVGRYPTNYLMEHRLIFW 120

Query: 99  R 97
           R
Sbjct: 121 R 121


>tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00001373001 PE=4 SV=1
          Length = 237

 Score =  109 bits (273), Expect = 9e-23
 Identities = 58/77 (75%), Positives = 64/77 (83%)
 Frame = -1

Query: 378 AGTELADAYSSDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSV 199
           A + L    + +TV ASS  K V+DP AF LHAALLRQAFAHCG+FPTAASRRSLGRVSV
Sbjct: 99  ASSVLPRLLAQNTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 158

Query: 198 PVWLIILSDQLLIVALV 148
           PVWLIILSDQLLI+ALV
Sbjct: 159 PVWLIILSDQLLIIALV 175



 Score =  106 bits (265), Expect = 7e-22
 Identities = 54/60 (90%), Positives = 55/60 (91%)
 Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
           FTAPPEIPSAPTVLQ  SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 49  FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 108


>tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp.
           japonica GN=P0496H07.14 PE=4 SV=1
          Length = 265

 Score =  108 bits (270), Expect = 2e-22
 Identities = 58/77 (75%), Positives = 63/77 (81%)
 Frame = -1

Query: 378 AGTELADAYSSDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSV 199
           A + L    + +TV  SS RK V DP AF LHAALLRQAFAHCG+FPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177

Query: 198 PVWLIILSDQLLIVALV 148
           PVWLIILSDQLLI+ALV
Sbjct: 178 PVWLIILSDQLLIIALV 194



 Score =  106 bits (265), Expect = 7e-22
 Identities = 54/60 (90%), Positives = 55/60 (91%)
 Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
           FTAPPEIPSAPTVLQ  SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 68  FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 127


>tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas
           taitungensis PE=4 SV=1
          Length = 75

 Score =  106 bits (265), Expect = 7e-22
 Identities = 54/60 (90%), Positives = 55/60 (91%)
 Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
           FTAPPEIPSAPTVLQ  SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 14  FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 73


>tr|B3D9T0|B3D9T0_BURM1 Putative uncharacterized protein
           OS=Burkholderia multivorans (strain ATCC 17616 / 249)
           GN=BMULJ_05098 PE=4 SV=1
          Length = 62

 Score = 93.2 bits (230), Expect = 8e-18
 Identities = 47/61 (77%), Positives = 52/61 (85%)
 Frame = -1

Query: 312 VYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLT 133
           +Y+P AF  HAALL QAFAHC +FPTAASRRSLGRVSVPVWL++LSDQLLIVALV    T
Sbjct: 2   LYNPKAFFTHAALLDQAFAHCPKFPTAASRRSLGRVSVPVWLVVLSDQLLIVALVGLYPT 61

Query: 132 N 130
           N
Sbjct: 62  N 62


>tr|A5Z511|A5Z511_9FIRM Putative uncharacterized protein
           OS=Eubacterium ventriosum ATCC 27560 GN=EUBVEN_00788
           PE=4 SV=1
          Length = 92

 Score = 89.7 bits (221), Expect = 9e-17
 Identities = 48/70 (68%), Positives = 52/70 (74%)
 Frame = -1

Query: 312 VYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLT 133
           VY P  F LHAA L Q F HC  FPTAASRRSLGRVSVP+W I LS +LLIVALV   LT
Sbjct: 5   VYIPKYFFLHAASLHQGFPHCAIFPTAASRRSLGRVSVPMWPITLSSRLLIVALVGRYLT 64

Query: 132 NKLIRRKPLL 103
           N+LIRR  +L
Sbjct: 65  NQLIRRGSIL 74


>tr|Q8CMB1|Q8CMB1_VIBVU Putative uncharacterized protein (Chlorobium
           tepidum Orf122 like protein) (Orf122-like protein)
           OS=Vibrio vulnificus GN=VV1_0924 PE=4 SV=1
          Length = 76

 Score = 89.4 bits (220), Expect = 1e-16
 Identities = 50/71 (70%), Positives = 53/71 (74%)
 Frame = -1

Query: 342 TVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLL 163
           T   SS  K +Y+P AF  HAA L QA AHC  FPTAASRRSL RVSVPVWLIILSDQL 
Sbjct: 6   TTPPSSQLKVLYNPKAFFTHAAWLHQACAHCAIFPTAASRRSLDRVSVPVWLIILSDQLG 65

Query: 162 IVALVNHCLTN 130
           IVALV+  LTN
Sbjct: 66  IVALVSPYLTN 76


>tr|Q8D475|Q8D475_VIBVU Putative uncharacterized protein OS=Vibrio
           vulnificus GN=VV2_1437 PE=4 SV=1
          Length = 76

 Score = 87.8 bits (216), Expect = 3e-16
 Identities = 49/71 (69%), Positives = 52/71 (73%)
 Frame = -1

Query: 342 TVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLL 163
           T   SS  K +Y+P AF  HAA L QA AHC  FPTAASRRSL RVSVPVWLII SDQL 
Sbjct: 6   TTPPSSQLKVLYNPKAFFTHAAWLHQACAHCAIFPTAASRRSLDRVSVPVWLIIFSDQLG 65

Query: 162 IVALVNHCLTN 130
           IVALV+  LTN
Sbjct: 66  IVALVSPYLTN 76


>tr|A5KRL1|A5KRL1_9FIRM Putative uncharacterized protein
           OS=Ruminococcus torques ATCC 27756 GN=RUMTOR_02906 PE=4
           SV=1
          Length = 103

 Score = 87.4 bits (215), Expect = 5e-16
 Identities = 48/78 (61%), Positives = 55/78 (70%)
 Frame = -1

Query: 348 SDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQ 169
           S   + SSL   +Y P  F  HAA L Q F HC  FPTAASRRSLGRVSVP+W + LS +
Sbjct: 4   SQVPSFSSLLIELYIPKYFFAHAASLHQGFPHCAIFPTAASRRSLGRVSVPMWPVTLSGR 63

Query: 168 LLIVALVNHCLTNKLIRR 115
           LLIVALV+  LTN+LIRR
Sbjct: 64  LLIVALVSRYLTNQLIRR 81


>tr|A9ZLL5|A9ZLL5_COXBU Putative uncharacterized protein (Fragment)
           OS=Coxiella burnetii RSA 334 GN=COXBURSA334_A0040 PE=4
           SV=1
          Length = 72

 Score = 86.7 bits (213), Expect = 8e-16
 Identities = 46/67 (68%), Positives = 50/67 (74%)
 Frame = -1

Query: 330 SSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVAL 151
           SS  KGVY P    LHAALL Q   HC  FPTAASRRSL RVSVPV LIILSDQ+ ++AL
Sbjct: 6   SSPIKGVYTPKCVILHAALLHQTCVHCAIFPTAASRRSLDRVSVPVCLIILSDQVCVIAL 65

Query: 150 VNHCLTN 130
           V+H LTN
Sbjct: 66  VSHYLTN 72