BP912825
Clone id YMU001_000023_C11
Library
Length 552
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_C11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
CGGGTGAGTAACGCGTAAGAACCTGCCCCTGGGAGGGGTACAACGGCTGGAAACGGTTGC
TAATACCCCATACGCTGAGGAGCAAAAGGGATGGATCCGCCCAAGGAGGGGCTTGCGTCT
GATTAGCTTGTTGGTGAGGCAATGGTTTACCAAGGCAACGATCAGTAGCTGGTCTGAGAG
GATGATCAGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGG
GAATCTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGCAGAAGGCTCA
CGGGTCGTAAACTCCTTTTCTCAGAGAAGAAGCAGTGACGGTATCTGAGGAATAAGCATC
GGCTAACTCTGTGCCAGCAGCCGCGGTAAGACAGGGGATGCAAGCGTTATCCGGAATGAT
TGGGCGTAAAGCGTCTGTAGGTGGCTCCTTAAGTCCGCTGTCAAATCCCAGAGCTCAACC
CCGGACAGGCGATGGAAACTACTGGGCTGGAGTACGGTAGGGGCGGAGGGAATTTCCGGT
GGAGCGGTGAAA
■■Homology search results ■■ -
sp_hit_id Q9P281
Definition sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1 OS=Homo sapiens
Align length 53
Score (bit) 31.2
E-value 3.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912825|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C11.
(552 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing prot... 31 3.5
sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic ... 30 7.8

>sp|Q9P281|BAHC1_HUMAN BAH and coiled-coil domain-containing protein 1
OS=Homo sapiens GN=BAHCC1 PE=1 SV=3
Length = 2608

Score = 31.2 bits (69), Expect = 3.5
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = -3

Query: 319 KRSLRPVSLLPPRGIAPSGFRPLRKIPHCCLP*E-SGPCLSPSVADHPLRPAT 164
K + +PV+L P APS K+P CC P + P SP+ P P T
Sbjct: 965 KSTHKPVALTPTAPGAPSPAAGPTKLPPCCHPPDPKPPASSPTPPPRPSAPCT 1017


>sp|Q4P8R9|PABP_USTMA Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Ustilago maydis GN=PAB1 PE=3 SV=1
Length = 651

Score = 30.0 bits (66), Expect = 7.8
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 6/70 (8%)
Frame = -3

Query: 286 PRGIAPSGFRPLRKIPHCCLP*ESGPCLSPSVADHPL------RPATDRCLGKPLPHQQA 125
P G+ P G+RP R P P +G P+ A P RPA G+P+P A
Sbjct: 486 PAGMMPQGYRPAR--PPRGAPNAAGGPAPPAGARPPTGVNGAPRPAGQPVPGQPMPRGPA 543

Query: 124 NQTQAPPWAD 95
+ P AD
Sbjct: 544 ARPAGRPEAD 553


tr_hit_id Q9F713
Definition tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum
Align length 121
Score (bit) 137.0
E-value 3.0e-31
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912825|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C11.
(552 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum P... 137 3e-31
tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, who... 109 9e-23
tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp. jap... 108 2e-22
tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas... 106 7e-22
tr|B3D9T0|B3D9T0_BURM1 Putative uncharacterized protein OS=Burkh... 93 8e-18
tr|A5Z511|A5Z511_9FIRM Putative uncharacterized protein OS=Eubac... 90 9e-17
tr|Q8CMB1|Q8CMB1_VIBVU Putative uncharacterized protein (Chlorob... 89 1e-16
tr|Q8D475|Q8D475_VIBVU Putative uncharacterized protein OS=Vibri... 88 3e-16
tr|A5KRL1|A5KRL1_9FIRM Putative uncharacterized protein OS=Rumin... 87 5e-16
tr|A9ZLL5|A9ZLL5_COXBU Putative uncharacterized protein (Fragmen... 87 8e-16
tr|B7PQ76|B7PQ76_IXOSC Putative uncharacterized protein (Fragmen... 83 1e-14
tr|Q86WC9|Q86WC9_HUMAN PG1 protein (Fragment) OS=Homo sapiens PE... 69 1e-14
tr|A4VYJ1|A4VYJ1_STRS2 Putative uncharacterized protein OS=Strep... 82 1e-14
tr|Q302M8|Q302M8_STRSU Putative uncharacterized protein OS=Strep... 82 1e-14
tr|A5KRL2|A5KRL2_9FIRM Putative uncharacterized protein OS=Rumin... 80 7e-14
tr|A5KR94|A5KR94_9FIRM Putative uncharacterized protein OS=Rumin... 79 2e-13
tr|B6QWP6|B6QWP6_9RHOB Putative uncharacterized protein OS=Pseud... 76 1e-12
tr|A5C517|A5C517_VITVI Putative uncharacterized protein OS=Vitis... 75 2e-12
tr|A5ZYU0|A5ZYU0_9FIRM Putative uncharacterized protein OS=Rumin... 72 2e-11
tr|Q8DEV3|Q8DEV3_VIBVU Putative uncharacterized protein OS=Vibri... 71 3e-11
tr|A7QBS3|A7QBS3_VITVI Chromosome chr1 scaffold_75, whole genome... 45 8e-10
tr|Q85WW0|Q85WW0_PINKO ORF40s OS=Pinus koraiensis PE=4 SV=1 65 3e-09
tr|B7R8V3|B7R8V3_9THEO Putative uncharacterized protein OS=Carbo... 63 1e-08
tr|A1YSF7|A1YSF7_STRSU Putative uncharacterized protein (Fragmen... 62 2e-08
tr|A1FB49|A1FB49_VIBCH Putative uncharacterized protein OS=Vibri... 61 3e-08
tr|Q4HIX0|Q4HIX0_CAMLA Putative uncharacterized protein OS=Campy... 61 4e-08
tr|A4QMA9|A4QMA9_PINKO ORF40t OS=Pinus koraiensis PE=4 SV=1 61 4e-08
tr|O57956|O57956_PYRHO Putative uncharacterized protein PH0217 O... 59 1e-07
tr|B5IUJ1|B5IUJ1_9EURY Putative uncharacterized protein OS=Therm... 47 2e-07
tr|Q9Y1P3|Q9Y1P3_BRUMA Putative uncharacterized protein (Fragmen... 58 3e-07

>tr|Q9F713|Q9F713_CHLTE Orf122 (Fragment) OS=Chlorobium tepidum PE=4
SV=1
Length = 121

Score = 137 bits (346), Expect = 3e-31
Identities = 76/121 (62%), Positives = 84/121 (69%), Gaps = 5/121 (4%)
Frame = -1

Query: 444 PPTDALRPIIPDNACIPCLTAAAGTELADAYSSDTVTA-----SSLRKGVYDP*AFCLHA 280
PP L P+ PDNAC PC+TAAAGTELA AYS TVTA SS KG Y P F +HA
Sbjct: 1 PPAHPLHPVNPDNACHPCITAAAGTELAVAYSQGTVTAGKPTSSSPAKGFYIPKNFIIHA 60

Query: 279 ALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLTNKLIRRKPLLG 100
ALLRQAFAHC F TAASRRSL RVSVP+WLIILSDQL +V LV TN L+ + +
Sbjct: 61 ALLRQAFAHCAIFLTAASRRSLDRVSVPMWLIILSDQLSVVGLVGRYPTNYLMEHRLIFW 120

Query: 99 R 97
R
Sbjct: 121 R 121


>tr|A7QL10|A7QL10_VITVI Chromosome undetermined scaffold_116, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00001373001 PE=4 SV=1
Length = 237

Score = 109 bits (273), Expect = 9e-23
Identities = 58/77 (75%), Positives = 64/77 (83%)
Frame = -1

Query: 378 AGTELADAYSSDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSV 199
A + L + +TV ASS K V+DP AF LHAALLRQAFAHCG+FPTAASRRSLGRVSV
Sbjct: 99 ASSVLPRLLAQNTVIASSPGKEVHDPWAFYLHAALLRQAFAHCGKFPTAASRRSLGRVSV 158

Query: 198 PVWLIILSDQLLIVALV 148
PVWLIILSDQLLI+ALV
Sbjct: 159 PVWLIILSDQLLIIALV 175



Score = 106 bits (265), Expect = 7e-22
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
FTAPPEIPSAPTVLQ SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 49 FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 108


>tr|Q5W7C9|Q5W7C9_ORYSJ Unknow protein OS=Oryza sativa subsp.
japonica GN=P0496H07.14 PE=4 SV=1
Length = 265

Score = 108 bits (270), Expect = 2e-22
Identities = 58/77 (75%), Positives = 63/77 (81%)
Frame = -1

Query: 378 AGTELADAYSSDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSV 199
A + L + +TV SS RK V DP AF LHAALLRQAFAHCG+FPTAASRRSLGRVSV
Sbjct: 118 ASSVLPRLLAQNTVIVSSPRKEVDDPWAFHLHAALLRQAFAHCGKFPTAASRRSLGRVSV 177

Query: 198 PVWLIILSDQLLIVALV 148
PVWLIILSDQLLI+ALV
Sbjct: 178 PVWLIILSDQLLIIALV 194



Score = 106 bits (265), Expect = 7e-22
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
FTAPPEIPSAPTVLQ SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 68 FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 127


>tr|A6H5N4|A6H5N4_CYCTA Putative uncharacterized protein OS=Cycas
taitungensis PE=4 SV=1
Length = 75

Score = 106 bits (265), Expect = 7e-22
Identities = 54/60 (90%), Positives = 55/60 (91%)
Frame = -2

Query: 551 FTAPPEIPSAPTVLQPSSFHRLSGVELWDLTADLRSHLQTLYAQSFRITLASPVLPRLLA 372
FTAPPEIPSAPTVLQ SFHRLS VE WDLTADL+SHLQTLYAQSFRITLAS VLPRLLA
Sbjct: 14 FTAPPEIPSAPTVLQLGSFHRLSRVEPWDLTADLKSHLQTLYAQSFRITLASSVLPRLLA 73


>tr|B3D9T0|B3D9T0_BURM1 Putative uncharacterized protein
OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=BMULJ_05098 PE=4 SV=1
Length = 62

Score = 93.2 bits (230), Expect = 8e-18
Identities = 47/61 (77%), Positives = 52/61 (85%)
Frame = -1

Query: 312 VYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLT 133
+Y+P AF HAALL QAFAHC +FPTAASRRSLGRVSVPVWL++LSDQLLIVALV T
Sbjct: 2 LYNPKAFFTHAALLDQAFAHCPKFPTAASRRSLGRVSVPVWLVVLSDQLLIVALVGLYPT 61

Query: 132 N 130
N
Sbjct: 62 N 62


>tr|A5Z511|A5Z511_9FIRM Putative uncharacterized protein
OS=Eubacterium ventriosum ATCC 27560 GN=EUBVEN_00788
PE=4 SV=1
Length = 92

Score = 89.7 bits (221), Expect = 9e-17
Identities = 48/70 (68%), Positives = 52/70 (74%)
Frame = -1

Query: 312 VYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVALVNHCLT 133
VY P F LHAA L Q F HC FPTAASRRSLGRVSVP+W I LS +LLIVALV LT
Sbjct: 5 VYIPKYFFLHAASLHQGFPHCAIFPTAASRRSLGRVSVPMWPITLSSRLLIVALVGRYLT 64

Query: 132 NKLIRRKPLL 103
N+LIRR +L
Sbjct: 65 NQLIRRGSIL 74


>tr|Q8CMB1|Q8CMB1_VIBVU Putative uncharacterized protein (Chlorobium
tepidum Orf122 like protein) (Orf122-like protein)
OS=Vibrio vulnificus GN=VV1_0924 PE=4 SV=1
Length = 76

Score = 89.4 bits (220), Expect = 1e-16
Identities = 50/71 (70%), Positives = 53/71 (74%)
Frame = -1

Query: 342 TVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLL 163
T SS K +Y+P AF HAA L QA AHC FPTAASRRSL RVSVPVWLIILSDQL
Sbjct: 6 TTPPSSQLKVLYNPKAFFTHAAWLHQACAHCAIFPTAASRRSLDRVSVPVWLIILSDQLG 65

Query: 162 IVALVNHCLTN 130
IVALV+ LTN
Sbjct: 66 IVALVSPYLTN 76


>tr|Q8D475|Q8D475_VIBVU Putative uncharacterized protein OS=Vibrio
vulnificus GN=VV2_1437 PE=4 SV=1
Length = 76

Score = 87.8 bits (216), Expect = 3e-16
Identities = 49/71 (69%), Positives = 52/71 (73%)
Frame = -1

Query: 342 TVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLL 163
T SS K +Y+P AF HAA L QA AHC FPTAASRRSL RVSVPVWLII SDQL
Sbjct: 6 TTPPSSQLKVLYNPKAFFTHAAWLHQACAHCAIFPTAASRRSLDRVSVPVWLIIFSDQLG 65

Query: 162 IVALVNHCLTN 130
IVALV+ LTN
Sbjct: 66 IVALVSPYLTN 76


>tr|A5KRL1|A5KRL1_9FIRM Putative uncharacterized protein
OS=Ruminococcus torques ATCC 27756 GN=RUMTOR_02906 PE=4
SV=1
Length = 103

Score = 87.4 bits (215), Expect = 5e-16
Identities = 48/78 (61%), Positives = 55/78 (70%)
Frame = -1

Query: 348 SDTVTASSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQ 169
S + SSL +Y P F HAA L Q F HC FPTAASRRSLGRVSVP+W + LS +
Sbjct: 4 SQVPSFSSLLIELYIPKYFFAHAASLHQGFPHCAIFPTAASRRSLGRVSVPMWPVTLSGR 63

Query: 168 LLIVALVNHCLTNKLIRR 115
LLIVALV+ LTN+LIRR
Sbjct: 64 LLIVALVSRYLTNQLIRR 81


>tr|A9ZLL5|A9ZLL5_COXBU Putative uncharacterized protein (Fragment)
OS=Coxiella burnetii RSA 334 GN=COXBURSA334_A0040 PE=4
SV=1
Length = 72

Score = 86.7 bits (213), Expect = 8e-16
Identities = 46/67 (68%), Positives = 50/67 (74%)
Frame = -1

Query: 330 SSLRKGVYDP*AFCLHAALLRQAFAHCGRFPTAASRRSLGRVSVPVWLIILSDQLLIVAL 151
SS KGVY P LHAALL Q HC FPTAASRRSL RVSVPV LIILSDQ+ ++AL
Sbjct: 6 SSPIKGVYTPKCVILHAALLHQTCVHCAIFPTAASRRSLDRVSVPVCLIILSDQVCVIAL 65

Query: 150 VNHCLTN 130
V+H LTN
Sbjct: 66 VSHYLTN 72