BP912826
Clone id YMU001_000023_C12
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_C12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGGGATGATACTGGTGTCGGCACTCTAGTATGAAGGTTCCGACTACATGTGTGCACTCCA
AGGGCTCACCGCATGCAACACACATACCAAACACCGGAATCACATTTACCGAATCATTAA
CCTGGGGCCTAAGATATAGCAGGAACCTCTTCCCAAGCGTGATATCAGACAACATCTCCT
TCACAAATAGGGTATGCTCTTGACCTTCCTTCCATTTTTTCTCCAGAGTGTCATACTCAG
CCTGTTGATAACCAGCGGTCCCAATTAGTTTCAAAAACTACCAAGAAGTCATATCGAGAC
TGTTACTTCTAAGTACTGTACTACCAAACAGAACCCAAACTACCAAAACCACCAAAACTA
CCAAAAACTACCAAACTCGGGAATCATATAGTACCAAAAACATATAAATACCCTCAATGC
AGAACTAAACTACCCAAACCTTATTAAAACTACCAAAAGCCACTTTTTGCAGCACTTTCA
AATAGTACCTAAAAGTA
■■Homology search results ■■ -
sp_hit_id Q4KKX4
Definition sp|Q4KKX4|NCOR1_XENTR Nuclear receptor corepressor 1 OS=Xenopus tropicalis
Align length 32
Score (bit) 31.6
E-value 2.1
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912826|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C12.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q4KKX4|NCOR1_XENTR Nuclear receptor corepressor 1 OS=Xenopus ... 32 2.1
sp|P0A285|RECO_SALTY DNA repair protein recO OS=Salmonella typhi... 30 6.1
sp|P0A286|RECO_SALTI DNA repair protein recO OS=Salmonella typhi... 30 6.1
sp|A9N1T3|RECO_SALPB DNA repair protein recO OS=Salmonella parat... 30 6.1
sp|Q5PIG3|RECO_SALPA DNA repair protein recO OS=Salmonella parat... 30 6.1
sp|Q57LD2|RECO_SALCH DNA repair protein recO OS=Salmonella chole... 30 6.1
sp|Q65KT8|METE_BACLD 5-methyltetrahydropteroyltriglutamate--homo... 30 6.1
sp|Q87JE8|CATA_VIBPA Catalase OS=Vibrio parahaemolyticus GN=VPA0... 30 6.1
sp|Q9KRQ1|CATA_VIBCH Catalase OS=Vibrio cholerae GN=VC_1585 PE=3... 30 6.1

>sp|Q4KKX4|NCOR1_XENTR Nuclear receptor corepressor 1 OS=Xenopus
tropicalis GN=ncor1 PE=2 SV=1
Length = 2494

Score = 31.6 bits (70), Expect = 2.1
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1

Query: 163 YQTTSPSQIGYALDLPSIFSPECHTQPVDNQR 258
+Q+T+PS S FSPE QPV NQR
Sbjct: 2145 FQSTNPSSTPVRTKASSRFSPESQVQPVHNQR 2176


>sp|P0A285|RECO_SALTY DNA repair protein recO OS=Salmonella
typhimurium GN=recO PE=3 SV=1
Length = 242

Score = 30.0 bits (66), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3

Query: 78 THIPNTGITFTESLTWGLRYSRNLFPSVISDNISFTNR 191
TH +G +++T+ R + F SV+ DN +FT R
Sbjct: 149 THCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGR 186


>sp|P0A286|RECO_SALTI DNA repair protein recO OS=Salmonella typhi
GN=recO PE=3 SV=1
Length = 242

Score = 30.0 bits (66), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3

Query: 78 THIPNTGITFTESLTWGLRYSRNLFPSVISDNISFTNR 191
TH +G +++T+ R + F SV+ DN +FT R
Sbjct: 149 THCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGR 186


>sp|A9N1T3|RECO_SALPB DNA repair protein recO OS=Salmonella
paratyphi B (strain ATCC BAA-1250 / SPB7) GN=recO PE=3
SV=1
Length = 242

Score = 30.0 bits (66), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3

Query: 78 THIPNTGITFTESLTWGLRYSRNLFPSVISDNISFTNR 191
TH +G +++T+ R + F SV+ DN +FT R
Sbjct: 149 THCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGR 186


>sp|Q5PIG3|RECO_SALPA DNA repair protein recO OS=Salmonella
paratyphi A GN=recO PE=3 SV=1
Length = 242

Score = 30.0 bits (66), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3

Query: 78 THIPNTGITFTESLTWGLRYSRNLFPSVISDNISFTNR 191
TH +G +++T+ R + F SV+ DN +FT R
Sbjct: 149 THCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGR 186


>sp|Q57LD2|RECO_SALCH DNA repair protein recO OS=Salmonella
choleraesuis GN=recO PE=3 SV=1
Length = 242

Score = 30.0 bits (66), Expect = 6.1
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3

Query: 78 THIPNTGITFTESLTWGLRYSRNLFPSVISDNISFTNR 191
TH +G +++T+ R + F SV+ DN +FT R
Sbjct: 149 THCAGSGERVDDTMTYRYREEKGFFASVVIDNNTFTGR 186


>sp|Q65KT8|METE_BACLD
5-methyltetrahydropteroyltriglutamate--homocysteine
methyltransferase OS=Bacillus licheniformis (strain DSM
13 / ATCC 14580) GN=metE PE=3 SV=1
Length = 762

Score = 30.0 bits (66), Expect = 6.1
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -2

Query: 229 TLEKKWKEGQEHTLFVKEMLSDITLGKRFLLYLRPQVNDSVNVIPV 92
+LE WK + F+KEM ++FL L+ Q++ +++IPV
Sbjct: 23 SLEAYWKGNTDRETFLKEM------DEQFLAALQTQLDQQIDIIPV 62


>sp|Q87JE8|CATA_VIBPA Catalase OS=Vibrio parahaemolyticus GN=VPA0305
PE=3 SV=2
Length = 504

Score = 30.0 bits (66), Expect = 6.1
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3

Query: 42 TTCVHSKGSPHATHIPNTGIT--FTESLTWGLRYSRNLFPSVISDNISFTNRVCS 200
+T +HSKGSP P T +TE W L NL I D+I F + V S
Sbjct: 111 STVIHSKGSPETLRDPRGFATKFYTEQGNWDL-VGNNLPVFFIRDSIKFPDMVHS 164


>sp|Q9KRQ1|CATA_VIBCH Catalase OS=Vibrio cholerae GN=VC_1585 PE=3
SV=2
Length = 503

Score = 30.0 bits (66), Expect = 6.1
Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Frame = +3

Query: 42 TTCVHSKGSPHATHIPNTGIT--FTESLTWGLRYSRNLFPSVISDNISFTNRVCS 200
+T +HSKGSP P T +TE W L NL I D+I F + V S
Sbjct: 111 STVIHSKGSPETLRDPRGFATKFYTEQGNWDL-VGNNLPVFFIRDSIKFPDMVHS 164


tr_hit_id Q5AHA7
Definition tr|Q5AHA7|Q5AHA7_CANAL Putative uncharacterized protein THI20 OS=Candida albicans
Align length 100
Score (bit) 35.8
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912826|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_C12.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q5AHA7|Q5AHA7_CANAL Putative uncharacterized protein THI20 OS... 36 1.2
tr|Q4SB66|Q4SB66_TETNG Chromosome undetermined SCAF14677, whole ... 33 7.5
tr|A2E2R5|A2E2R5_TRIVA PIKK family atypical protein kinase OS=Tr... 33 7.5

>tr|Q5AHA7|Q5AHA7_CANAL Putative uncharacterized protein THI20
OS=Candida albicans GN=THI20 PE=4 SV=1
Length = 573

Score = 35.8 bits (81), Expect = 1.2
Identities = 27/100 (27%), Positives = 41/100 (41%)
Frame = -2

Query: 322 STVLRSNSLDMTSW*FLKLIGTAGYQQAEYDTLEKKWKEGQEHTLFVKEMLSDITLGKRF 143
S + SNS+ T FL G + + WK EH FVK++ + +F
Sbjct: 323 SVIKTSNSMPTT---FLNQSGEFLDYLINHPDVNNNWKNYTEHK-FVKDLAENNLPFNKF 378

Query: 142 LLYLRPQVNDSVNVIPVFGMCVACGEPLECTHVVGTFILE 23
L +L+ + VN V G+ + + TH T I E
Sbjct: 379 LYFLKQDYHYLVNYAQVHGLAASLAPTYQQTHAQATIIAE 418


>tr|Q4SB66|Q4SB66_TETNG Chromosome undetermined SCAF14677, whole
genome shotgun sequence OS=Tetraodon nigroviridis
GN=GSTENG00021113001 PE=4 SV=1
Length = 201

Score = 33.1 bits (74), Expect = 7.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = -2

Query: 73 CGEPLECTHVVGTFILECRHQY 8
CG+ EC + VG+F ECRH Y
Sbjct: 126 CGQDRECVNTVGSFRCECRHGY 147


>tr|A2E2R5|A2E2R5_TRIVA PIKK family atypical protein kinase
OS=Trichomonas vaginalis G3 GN=TVAG_212750 PE=4 SV=1
Length = 2178

Score = 33.1 bits (74), Expect = 7.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +1

Query: 163 YQTTSPSQIGYALDLPSIFSPECHTQPVDNQRSQLVSKTTKKSYRDC 303
YQ + + L S+F Q + NQ SQL+++ K S+ DC
Sbjct: 1601 YQAQNQGNFAEIIQLLSLFFATADNQKIFNQTSQLINRIAKSSFIDC 1647