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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912832
Clone id YMU001_000023_D06
Library
Length 565
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_D06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
TATTACCTGCAGGTACTCCCGCACTGTTGCGGGACAGTTTCATGGAGTGTCCCATCTATA
CTATCGCAAGCATAAAAAGTCAAAGGTCCACTGCAACTCTACAACGCGGACAATTCATCT
TTACACTCTTGTGTGCTACGTGCTTCCCCCCTCTTTGTCTTGACCCCTCTATTGGCCTTG
AATCAAACATGCCTTCCCCCTCCTCTACCTCCACCCTCTTTCATATCAGCCCTAGCCCAA
CAGCTCATGCACCTAATGTGCCTGTTGTACCTGTTTCCTTCCACTTGATAACCTCGCTCT
TTTGCTTACTTCCCTGATGCTATACGTTGTTGTCATCCACTGACCTGTTGGCTTAGCCCT
AGCTGTGATTGGTTGTCCAATGGGCCCAGTCTCAACAACTTCTCACATCATGGTGAACCT
TCCCATGAGTGGCCGTATGTGCCTATGGCAATTATTCCCTCCTCTACCCAAGCACTTTGT
GCTTCCATCCACACCGACTAGCAACCATTTACCATGGCAGTTCCCCTTGTCATTCGCTAG
GTGATGCCCGTGCTCTATGCCATCC
■■Homology search results ■■ -
sp_hit_id Q9NJ15
Definition sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5 OS=Branchiostoma californiensis
Align length 44
Score (bit) 32.3
E-value 1.7
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912832|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_D06.
         (565 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin typ...    32   1.7  
sp|P36363|FGF7_MOUSE Keratinocyte growth factor OS=Mus musculus ...    32   2.2  
sp|Q6P7C7|GPNMB_RAT Transmembrane glycoprotein NMB OS=Rattus nor...    31   4.8  
sp|Q54ZB3|COG1_DICDI Conserved oligomeric Golgi complex subunit ...    31   4.8  
sp|Q80W92|VAC14_RAT Protein VAC14 homolog OS=Rattus norvegicus G...    31   4.9  
sp|Q80WQ2|VAC14_MOUSE Protein VAC14 homolog OS=Mus musculus GN=V...    31   4.9  
sp|Q9A8G9|F16PA_CAUCR Fructose-1,6-bisphosphatase class 1 OS=Cau...    30   6.3  
sp|Q9BUN1|CA056_HUMAN Uncharacterized protein C1orf56 OS=Homo sa...    30   6.3  
sp|Q9SMH5|DYHC2_CHLRE Cytoplasmic dynein 2 heavy chain 1 OS=Chla...    30   8.2  
sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila m...    30   8.2  
sp|Q01870|WETA_PENCH Regulatory protein wetA OS=Penicillium chry...    30   8.3  

>sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5
            OS=Branchiostoma californiensis GN=PC6 PE=2 SV=1
          Length = 1696

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
 Frame = -3

Query: 137  STQECKDELSAL*SCSGPLTFYACDSIDGT-LHETVPQQCGSTC 9
            + +ECK   S+  +CSGP +F+     DG  LHE+    C STC
Sbjct: 1111 TNKECKPCDSSCFTCSGPASFHCLSCADGDFLHES---SCRSTC 1151


>sp|P36363|FGF7_MOUSE Keratinocyte growth factor OS=Mus musculus
           GN=Fgf7 PE=2 SV=1
          Length = 194

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = +3

Query: 123 TLLCATCFPPLCLDPSIGLESNMPSPSSTSTLFHISPSPTAHAPNVPVVPVSFHLITSLF 302
           TLL  +CF  +CL  +I L  N  SP  T+T  + S SP  H  +   +      +  LF
Sbjct: 12  TLLYRSCFHLVCLVGTISLACNDMSPEQTATSVNCS-SPERHTRSYDYMEGGDIRVRRLF 70

Query: 303 C 305
           C
Sbjct: 71  C 71


>sp|Q6P7C7|GPNMB_RAT Transmembrane glycoprotein NMB OS=Rattus
           norvegicus GN=Gpnmb PE=2 SV=1
          Length = 572

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 22/56 (39%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
 Frame = +3

Query: 108 GQFIFTLLCATCFPPLCLDPSIGLESNMPSPSS-TSTLFHISPSPTAHAPNVPVVP 272
           G F F L   T  P  C  P+       PSPSS TS     SPSPT   P+  ++P
Sbjct: 307 GTFNFNLTVQTAVPGPCPSPT-------PSPSSSTSPSPASSPSPTLSTPSPSLMP 355


>sp|Q54ZB3|COG1_DICDI Conserved oligomeric Golgi complex subunit 1
           OS=Dictyostelium discoideum GN=cog1 PE=3 SV=1
          Length = 1449

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 14/47 (29%), Positives = 24/47 (51%)
 Frame = +3

Query: 165 PSIGLESNMPSPSSTSTLFHISPSPTAHAPNVPVVPVSFHLITSLFC 305
           PS+ L S+  SP   +T   +  +PT      P  P+S++ + S+ C
Sbjct: 625 PSVSLTSSTSSPIIATTKATVLTTPTPTPTPTPTTPISWNRMFSIIC 671


>sp|Q80W92|VAC14_RAT Protein VAC14 homolog OS=Rattus norvegicus
           GN=Vac14 PE=2 SV=1
          Length = 783

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 371 GCPMGPVSTTSHIMVNLPMSGRMCLWQLFPPLPKHF-VLPSTPTSNHLPWQFPLS 532
           G P GP    +H  + +P SGR  L  L PP  K     PSTPT N   ++F ++
Sbjct: 482 GAPDGPDLQVNHSELQVPTSGRANL--LNPPNTKGLECSPSTPTMNSYFYKFMIN 534


>sp|Q80WQ2|VAC14_MOUSE Protein VAC14 homolog OS=Mus musculus
           GN=Vac14 PE=2 SV=1
          Length = 782

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
 Frame = +2

Query: 371 GCPMGPVSTTSHIMVNLPMSGRMCLWQLFPPLPKHFV-LPSTPTSNHLPWQFPLS 532
           G P GP    +H  + +P SGR  L  L PP  K     PSTPT N   ++F ++
Sbjct: 481 GAPDGPDLRVNHSELQVPTSGRANL--LNPPSTKGLEGSPSTPTMNSYFYKFMIN 533


>sp|Q9A8G9|F16PA_CAUCR Fructose-1,6-bisphosphatase class 1
           OS=Caulobacter crescentus GN=fbp PE=3 SV=1
          Length = 336

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
 Frame = +3

Query: 15  TPALLRDSFMEC-PIYTIASIKSQRSTATLQRGQFIFTLLCATCFPPLCLDPSIGLESNM 191
           T  +L D+   C P+  +AS + +    T + G ++ T      F PL  D S  ++ N+
Sbjct: 78  TNDMLSDALKACGPVAGLASEELEEVEPTGRVGGYLVT------FDPL--DGSSNIDVNV 129

Query: 192 PSPSSTSTLFHISPSPTAHAP 254
               S  T+F + P+P  HAP
Sbjct: 130 ----SVGTIFSVLPAPAGHAP 146


>sp|Q9BUN1|CA056_HUMAN Uncharacterized protein C1orf56 OS=Homo
           sapiens GN=C1orf56 PE=2 SV=1
          Length = 341

 Score = 30.4 bits (67), Expect = 6.3
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = +3

Query: 159 LDPSIGLESNMPSPSSTSTLFHISPSPTAHAPNVPVVP 272
           LD S+  ++N  S S+TST    +P PT H  + P +P
Sbjct: 264 LDTSLCTDTNCASQSTTSTRTTTTPFPTIHLRSSPSLP 301


>sp|Q9SMH5|DYHC2_CHLRE Cytoplasmic dynein 2 heavy chain 1
           OS=Chlamydomonas reinhardtii GN=DHC1B PE=1 SV=2
          Length = 4334

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -3

Query: 491 WMEAQSAWVEEGIIAIGTYGHSWEGSP*CEKLLR 390
           W++  +A VE+  + + T GH WEG+   +  +R
Sbjct: 319 WVQESTALVEDWRLGVDTGGHDWEGAAFADAYVR 352


>sp|Q9VJB6|CADN2_DROME Putative neural-cadherin 2 OS=Drosophila
            melanogaster GN=CadN2 PE=2 SV=2
          Length = 2215

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 18/64 (28%), Positives = 31/64 (48%)
 Frame = +3

Query: 18   PALLRDSFMECPIYTIASIKSQRSTATLQRGQFIFTLLCATCFPPLCLDPSIGLESNMPS 197
            PAL R+SF  CP      +K++ +    + G  + +L+ A C    C    +G   N+P+
Sbjct: 1377 PALARNSFPACPQTDEVCLKTEHTARCWEHGNCVASLVQAKCH---CQPGWMGPGCNVPT 1433

Query: 198  PSST 209
              +T
Sbjct: 1434 IPTT 1437
tr_hit_id B6HRP1
Definition tr|B6HRP1|B6HRP1_PENCH Pc22g25020 protein OS=Penicillium chrysogenum Wisconsin 54-1255
Align length 52
Score (bit) 29.6
E-value 0.41
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912832|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_D06.
         (565 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B6HRP1|B6HRP1_PENCH Pc22g25020 protein OS=Penicillium chrysog...    30   0.41 
tr|Q8NIT4|Q8NIT4_NEUCR Putative uncharacterized protein B13H18.2...    36   1.7  
tr|Q0TY70|Q0TY70_PHANO Putative uncharacterized protein OS=Phaeo...    36   1.7  
tr|Q4P323|Q4P323_USTMA Putative uncharacterized protein OS=Ustil...    35   3.7  
tr|A8HZN5|A8HZN5_CHLRE Predicted protein (Fragment) OS=Chlamydom...    33   8.3  

>tr|B6HRP1|B6HRP1_PENCH Pc22g25020 protein OS=Penicillium
           chrysogenum Wisconsin 54-1255 GN=Pc22g25020 PE=4 SV=1
          Length = 673

 Score = 29.6 bits (65), Expect(2) = 0.41
 Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 10/52 (19%)
 Frame = +3

Query: 147 PPLCLDPSIG----------LESNMPSPSSTSTLFHISPSPTAHAPNVPVVP 272
           PP  +DPS            L+ NMP+P+++    H+SP P + AP   V P
Sbjct: 40  PPPAIDPSAASMSQLPYRAFLQPNMPTPANS---VHLSPLPASPAPPSMVRP 88



 Score = 26.9 bits (58), Expect(2) = 0.41
 Identities = 17/51 (33%), Positives = 23/51 (45%)
 Frame = +2

Query: 362 AVIGCPMGPVSTTSHIMVNLPMSGRMCLWQLFPPLPKHFVLPSTPTSNHLP 514
           +V   PM    + + +    PM  R  L  L PP+P    L  TP + HLP
Sbjct: 97  SVFSFPMPGNRSPTEVRTPSPMMDRTALKAL-PPVPPGQALSPTPENIHLP 146


>tr|Q8NIT4|Q8NIT4_NEUCR Putative uncharacterized protein B13H18.270
           (Predicted protein) OS=Neurospora crassa GN=B13H18.270
           PE=4 SV=1
          Length = 1133

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 22/65 (33%), Positives = 34/65 (52%)
 Frame = +3

Query: 78  SQRSTATLQRGQFIFTLLCATCFPPLCLDPSIGLESNMPSPSSTSTLFHISPSPTAHAPN 257
           S +ST+ L+     ++++ A   PP    PS  +    P+P S  TL+  SPSP + + N
Sbjct: 417 SSKSTSPLK-----YSVMAAGHPPP---SPSASVRPEPPTPQSPPTLYRHSPSPPSKSSN 468

Query: 258 VPVVP 272
            PV P
Sbjct: 469 QPVSP 473


>tr|Q0TY70|Q0TY70_PHANO Putative uncharacterized protein
           OS=Phaeosphaeria nodorum GN=SNOG_15695 PE=4 SV=1
          Length = 178

 Score = 35.8 bits (81), Expect = 1.7
 Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 7/45 (15%)
 Frame = +3

Query: 165 PSIGLESNMPSPSSTSTLFHISPSPTAHAP-------NVPVVPVS 278
           P +GL SNMP+P+   T F +SP P+A  P         P+VP+S
Sbjct: 48  PGLGLPSNMPAPTDVPT-FTLSPLPSASIPASASSGATTPMVPIS 91


>tr|Q4P323|Q4P323_USTMA Putative uncharacterized protein OS=Ustilago
           maydis GN=UM05490.1 PE=4 SV=1
          Length = 813

 Score = 34.7 bits (78), Expect = 3.7
 Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
 Frame = +1

Query: 343 TCWLSP---SCDWLSNGPSLNNFSHHGEP 420
           T WLSP   SC W ++  S +NFSHH  P
Sbjct: 19  TPWLSPEASSCTWRTSSTSSSNFSHHSSP 47


>tr|A8HZN5|A8HZN5_CHLRE Predicted protein (Fragment)
           OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_93801 PE=4
           SV=1
          Length = 687

 Score = 33.5 bits (75), Expect = 8.3
 Identities = 16/34 (47%), Positives = 24/34 (70%)
 Frame = +2

Query: 353 LALAVIGCPMGPVSTTSHIMVNLPMSGRMCLWQL 454
           LAL+V+GCP+GP   T+   V+ P+S R+ +W L
Sbjct: 24  LALSVVGCPLGPDVFTA--AVSSPVSERVAVWLL 55