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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912844
Clone id YMU001_000023_E06
Library
Length 449
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_E06.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence 
GCAGGTACTCGCATGAGGGGTGAGGGGGATGGAACTATAATGGATGTGGAACTATATGCG
TAAGGGAGTATAAATAAAGAGAGTCCGTACAAGGTGCAAGTTGGGTTAGAGAAGGCCATG
TATATCTCTCTGTCTGGTTTGCTTATGTTGTAGTCGGATCTCCCAAATTGCCTTGTAAAT
CTTGGGATTGTACCTACGAAGTTAAAATTTCTCTCCTTCATTATCGATCTGGGCAGCTCT
CTGAAAGAAGTCCCTATGTCTATGAATCTCTAGTAATGAGGGACCCGGTTGTCTTTGATT
TTTCCACTCCAATAGTACTTATGTGTGGGTTGTCCTTTGAGAATGGATGTATTTCCTTTC
CATGTCCGCGTGTTTGCATGTCCTTTTGTCCTTGTGAACTTGTGATGGCCCAATCTCTAG
CATATGAGATGAGACCTTGAGCTATCCAA
■■Homology search results ■■ -
sp_hit_id Q6MI59
Definition sp|Q6MI59|SYD_BDEBA Aspartyl-tRNA synthetase OS=Bdellovibrio bacteriovorus
Align length 43
Score (bit) 30.8
E-value 2.8
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912844|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E06.
         (449 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q6MI59|SYD_BDEBA Aspartyl-tRNA synthetase OS=Bdellovibrio bac...    31   2.8  
sp|Q21LV6|PANC_SACD2 Pantothenate synthetase OS=Saccharophagus d...    30   4.7  
sp|Q6HCI1|TRMB_BACHK tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  
sp|Q632Z1|TRMB_BACCZ tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  
sp|P59717|TRMB_BACCR tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  
sp|Q72Z28|TRMB_BACC1 tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  
sp|P59716|TRMB_BACAN tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  
sp|A0RJT7|TRMB_BACAH tRNA (guanine-N(7)-)-methyltransferase OS=B...    29   8.0  

>sp|Q6MI59|SYD_BDEBA Aspartyl-tRNA synthetase OS=Bdellovibrio
           bacteriovorus GN=aspS PE=3 SV=1
          Length = 642

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 19/43 (44%), Positives = 21/43 (48%)
 Frame = -1

Query: 260 DIGTSFRELPRSIMKERNFNFVGTIPRFTRQFGRSDYNISKPD 132
           DI     +L R+I KE     VG IPR T Q     Y I KPD
Sbjct: 288 DIMEMNEKLLRTIWKEIKGIDVGAIPRMTYQEAMDRYGIDKPD 330


>sp|Q21LV6|PANC_SACD2 Pantothenate synthetase OS=Saccharophagus
           degradans (strain 2-40 / ATCC 43961 / DSM 17024) GN=panC
           PE=3 SV=1
          Length = 284

 Score = 30.0 bits (66), Expect = 4.7
 Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 9/56 (16%)
 Frame = -2

Query: 448 WIAQGLISYARDWAITSSQGQKDMQTRG---------HGKEIHPFSKDNPHISTIG 308
           W+ Q ++   RD+ +  S+ +K ++T G         + K + P + D+  I+ +G
Sbjct: 210 WVKQAILDGRRDFDVLESEAKKQIETAGFRPDYLSISNSKTLEPAANDDTDITVLG 265


>sp|Q6HCI1|TRMB_BACHK tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus thuringiensis subsp. konkukian GN=trmB PE=3
           SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70


>sp|Q632Z1|TRMB_BACCZ tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus cereus (strain ZK / E33L) GN=trmB PE=3 SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70


>sp|P59717|TRMB_BACCR tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=trmB
           PE=3 SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70


>sp|Q72Z28|TRMB_BACC1 tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus cereus (strain ATCC 10987) GN=trmB PE=3 SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70


>sp|P59716|TRMB_BACAN tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus anthracis GN=trmB PE=3 SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70


>sp|A0RJT7|TRMB_BACAH tRNA (guanine-N(7)-)-methyltransferase
           OS=Bacillus thuringiensis (strain Al Hakam) GN=trmB PE=3
           SV=1
          Length = 217

 Score = 29.3 bits (64), Expect = 8.0
 Identities = 11/23 (47%), Positives = 17/23 (73%)
 Frame = -2

Query: 367 GHGKEIHPFSKDNPHISTIGVEK 299
           G G+ ++  +K NPHI+ IG+EK
Sbjct: 48  GRGRFMYDMAKANPHINYIGIEK 70
tr_hit_id B7QL20
Definition tr|B7QL20|B7QL20_IXOSC Putative uncharacterized protein (Fragment) OS=Ixodes scapularis
Align length 59
Score (bit) 34.7
E-value 2.5
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912844|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E06.
         (449 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|B7QL20|B7QL20_IXOSC Putative uncharacterized protein (Fragmen...    35   2.5  
tr|Q7ZVU8|Q7ZVU8_DANRE Sulfatase 2 OS=Danio rerio GN=sulf2 PE=2 ...    33   9.4  
tr|A5WUS2|A5WUS2_DANRE Sulfatase 2 OS=Danio rerio GN=sulf2 PE=4 ...    33   9.4  
tr|Q6C0T5|Q6C0T5_YARLI YALI0F21901p OS=Yarrowia lipolytica GN=YA...    33   9.4  

>tr|B7QL20|B7QL20_IXOSC Putative uncharacterized protein (Fragment)
           OS=Ixodes scapularis GN=IscW_ISCW013785 PE=4 SV=1
          Length = 83

 Score = 34.7 bits (78), Expect = 2.5
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -3

Query: 408 PSQVHKDKRTCKHADMERKYIHSQRTTHT*VLLEWKNQRQPGPSLLEIHRHRDFFQRAA 232
           P +  ++    +  ++ER+ +H QRT H  ++L   +   P P     H+HRD+ QR +
Sbjct: 9   PCRPKQENHRSQTTEVERRALHVQRTHHPHLVLRCSSPPPPLPR----HQHRDYLQRTS 63


>tr|Q7ZVU8|Q7ZVU8_DANRE Sulfatase 2 OS=Danio rerio GN=sulf2 PE=2
           SV=1
          Length = 873

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 404 HKFTRTKGHANTRTWKGNTSILKGQPTHKYYWSGKIKDNRVPHY*RFIDI 255
           + FTR   +   + W+ +  + +G+P HK     +++ N +P Y R  D+
Sbjct: 399 NSFTRFHSYKKAKLWRDSFLVERGKPLHKLADGKEVEQNSLPKYQRVRDL 448


>tr|A5WUS2|A5WUS2_DANRE Sulfatase 2 OS=Danio rerio GN=sulf2 PE=4
           SV=1
          Length = 873

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 13/50 (26%), Positives = 26/50 (52%)
 Frame = -1

Query: 404 HKFTRTKGHANTRTWKGNTSILKGQPTHKYYWSGKIKDNRVPHY*RFIDI 255
           + FTR   +   + W+ +  + +G+P HK     +++ N +P Y R  D+
Sbjct: 399 NSFTRFHSYKKAKLWRDSFLVERGKPLHKLADGKEVEQNSLPKYQRVRDL 448


>tr|Q6C0T5|Q6C0T5_YARLI YALI0F21901p OS=Yarrowia lipolytica
           GN=YALI0F21901g PE=4 SV=1
          Length = 520

 Score = 32.7 bits (73), Expect = 9.4
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
 Frame = +3

Query: 93  GASWVREGHVYL----SVWFAYVVVGSPKLPCKSWDCTYEVKISLLHYRSGQL----SER 248
           G S V EGH  L    +++  Y++  S  L  K W     +  SL  Y SG L    ++R
Sbjct: 430 GTSKVLEGHSKLVRSINLYDDYIISSSYDLSIKIWTIEGRLLTSLTGYHSGSLITAKADR 489

Query: 249 SPYVYESLVMRDPVVFDF 302
              V  SL    PV+FDF
Sbjct: 490 QKIVSTSLGC-SPVIFDF 506