BP912846 |
Clone id |
YMU001_000023_E08 |
Library |
YMU01 |
Length |
563 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000023_E08. |
Accession |
BP912846 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL3639Contig1 |
Sequence |
GTAGAGAGTTCTAGCAAAAGAAGTAAATCCGTGATGCCCCGGTGAGCCGCAACGACCTCG ACCACTTGCCTTGTGCAACACGGCTCATTGCGACCTTTGACAAGGGACTGCTCTTCATGC TTCTCTTTCTTCTTGGAAGGCCAGGAAGTTTGAATATTCTTAAACCCAGCATGCGTAGAT ATAATCTCACAATATGGTGAGTCTGTCTCCACCATCATCCTCTCAGCCGGTATCTCAGAC ACAACTTCAAGATTTTCGTTGGTCTTCAACGAGCAACCATTAATACCTATCATCAAGGAA AAAGGATAATTCCTTCAACCCAACCAGATATATAACTAGGTGAATCCTAGAAACCCCCAA ATTCTCCTTGCAAGGAAAGTCCGTGTTATAGCCAATTATTTGCAAAACAATATAACCATC AATGCCCAATAAATACTGGATGTAGACCTAGGTACATATATGCTCCATCGAGCATAGCAC TGACTGCATACCTAGGAAATCCTCACTCAGGCATCAATGCCCAATACTGGATGTAGACCT ACGTATAACATAGAGGTCTGTGT |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q6GML7 |
Definition |
sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio |
Align length |
86 |
Score (bit) |
101.0 |
E-value |
2.0e-21 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912846|Adiantum capillus-veneris mRNA, clone: YMU001_000023_E08. (563 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio... 101 2e-21 sp|Q9UUF1|YNF8_SCHPO Uncharacterized deoxyribonuclease C17A3.08 ... 100 5e-21 sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenop... 97 7e-20 sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus m... 97 7e-20 sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo ... 96 1e-19 sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos t... 96 1e-19 sp|P34220|YBF5_YEAST Uncharacterized deoxyribonuclease YBL055C O... 86 1e-16 sp|P44718|Y454_HAEIN Uncharacterized deoxyribonuclease HI0454 OS... 38 0.039 sp|Q42884|AROC1_SOLLC Chorismate synthase 1, chloroplastic OS=So... 34 0.43 sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=So... 32 2.2 sp|Q9IBG7|CRIM2_XENLA Cysteine-rich motor neuron 2 protein OS=Xe... 32 2.8 sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease yabD OS=B... 31 4.8 sp|Q61001|LAMA5_MOUSE Laminin subunit alpha-5 OS=Mus musculus GN... 31 4.8 sp|P27859|TATD_ECOLI Deoxyribonuclease tatD OS=Escherichia coli ... 30 6.3 sp|A6MMG9|YCF1_CHLSC Putative membrane protein ycf1 OS=Chloranth... 30 8.2
>sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2 SV=1 Length = 298
Score = 101 bits (252), Expect = 2e-21 Identities = 53/86 (61%), Positives = 66/86 (76%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKH 117 L IGINGCSLKT ENLEV+ IP++R+M+ETD+P+C I +THAG K I+TS+P+KK K Sbjct: 191 LYIGINGCSLKTAENLEVMKSIPSDRLMIETDAPWCGIKNTHAGAKLIKTSFPTKK--KW 248
Query: 116 EEQSLVKGRNEPCCTRQVVEVVAAHR 39 E VK RNEPC QV+EV+AA R Sbjct: 249 ETGHCVKDRNEPCHIIQVLEVMAAVR 274
>sp|Q9UUF1|YNF8_SCHPO Uncharacterized deoxyribonuclease C17A3.08 OS=Schizosaccharomyces pombe GN=SPBC17A3.08 PE=2 SV=1 Length = 312
Score = 100 bits (249), Expect = 5e-21 Identities = 48/91 (52%), Positives = 68/91 (74%), Gaps = 2/91 (2%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWP--SKKKE 123 L +G+NGCSLKT ENLEVV IP E+M++ETD+P+CE+ +HAG + ++T P S KKE Sbjct: 204 LYVGVNGCSLKTEENLEVVRAIPLEKMLLETDAPWCEVRPSHAGHQFLKTKLPFDSCKKE 263
Query: 122 KHEEQSLVKGRNEPCCTRQVVEVVAAHRGIT 30 + +E +++GRNEPC T V E+VAA + I+ Sbjct: 264 RFKEGCMIRGRNEPCNTYIVAEIVAALKDIS 294
>sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2 SV=1 Length = 297
Score = 96.7 bits (239), Expect = 7e-20 Identities = 46/86 (53%), Positives = 65/86 (75%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKH 117 L IGINGCSLKT NL+V+ IP+ER+M+ETD+P+C + +THAG K ++T++P+KK K Sbjct: 191 LYIGINGCSLKTESNLDVLKSIPSERLMIETDAPWCGVKNTHAGSKLVKTTFPTKK--KW 248
Query: 116 EEQSLVKGRNEPCCTRQVVEVVAAHR 39 E +K RNEPC QV+E++A+ R Sbjct: 249 ESGHCLKDRNEPCHIIQVLEIMASAR 274
>sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=2 SV=1 Length = 295
Score = 96.7 bits (239), Expect = 7e-20 Identities = 47/86 (54%), Positives = 63/86 (73%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKH 117 L IG NGCSLKT NLEV+ IP+E++M+ETD+P+C + STHAG K I TS+P+KK K Sbjct: 191 LYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYINTSFPTKK--KW 248
Query: 116 EEQSLVKGRNEPCCTRQVVEVVAAHR 39 E +K RNEPC Q++E+++A R Sbjct: 249 ENGHCLKDRNEPCHIIQILEIMSAVR 274
>sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1 SV=2 Length = 297
Score = 95.9 bits (237), Expect = 1e-19 Identities = 46/86 (53%), Positives = 64/86 (74%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKH 117 L IG NGCSLKT NLEV+ IP+E++M+ETD+P+C + STHAG K I+T++P+KK K Sbjct: 191 LYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKK--KW 248
Query: 116 EEQSLVKGRNEPCCTRQVVEVVAAHR 39 E +K RNEPC Q++E+++A R Sbjct: 249 ESGHCLKDRNEPCHIIQILEIMSAVR 274
>sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1 Length = 297
Score = 95.9 bits (237), Expect = 1e-19 Identities = 46/86 (53%), Positives = 64/86 (74%) Frame = -1
Query: 296 LMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKH 117 L IG NGCSLKT NLEV+ IP+E++M+ETD+P+C + +THAG K I+TS+P+KK K Sbjct: 191 LYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKNTHAGSKYIKTSFPTKK--KW 248
Query: 116 EEQSLVKGRNEPCCTRQVVEVVAAHR 39 E +K RNEPC Q++E+++A R Sbjct: 249 ENGHCLKDRNEPCHIIQILEIMSAVR 274
>sp|P34220|YBF5_YEAST Uncharacterized deoxyribonuclease YBL055C OS=Saccharomyces cerevisiae GN=YBL055C PE=1 SV=1 Length = 418
Score = 86.3 bits (212), Expect = 1e-16 Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 16/113 (14%) Frame = -1
Query: 299 SLMIGINGCSLKTNENLEVVSEIPAERMMVETDSPYCEIISTHAGFKNI----------Q 150 ++ IG+NGCSL+T ENL VV +IP ER+++ETD+P+CEI THA F+ + Sbjct: 295 NIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEY 354
Query: 149 TSWPSKKKEK------HEEQSLVKGRNEPCCTRQVVEVVAAHRGITDLLLLLE 9 ++ S KK K EE +VKGRNEPC QV VV+ + + DL L++ Sbjct: 355 PAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDV-DLATLID 406
>sp|P44718|Y454_HAEIN Uncharacterized deoxyribonuclease HI0454 OS=Haemophilus influenzae GN=HI0454 PE=3 SV=1 Length = 260
Score = 37.7 bits (86), Expect = 0.039 Identities = 24/73 (32%), Positives = 35/73 (47%) Frame = -1
Query: 248 EVVSEIPAERMMVETDSPYCEIISTHAGFKNIQTSWPSKKKEKHEEQSLVKGRNEPCCTR 69 EV+ +P ER++VETDSPY + P + KE N+P TR Sbjct: 191 EVIRYVPMERLLVETDSPYLAPV-------------PYRGKE-----------NQPAYTR 226
Query: 68 QVVEVVAAHRGIT 30 +V E VA +G++ Sbjct: 227 EVCEYVATLKGVS 239
>sp|Q42884|AROC1_SOLLC Chorismate synthase 1, chloroplastic OS=Solanum lycopersicum GN=CS1 PE=2 SV=1 Length = 440
Score = 34.3 bits (77), Expect = 0.43 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%) Frame = -1
Query: 188 EIISTHAGFKNIQTSWPSKK-----KEKHEEQSLVKGRNEPCCTRQVVEVVAA 45 E+I+ GFK TS S+K ++KHE + + +GR++PC + V +V A Sbjct: 349 EVINMRIGFK--PTSTISRKQQTVTRDKHETELIARGRHDPCVVPRAVPMVEA 399
>sp|Q42885|AROC2_SOLLC Chorismate synthase 2, chloroplastic OS=Solanum lycopersicum GN=CS2 PE=2 SV=1 Length = 431
Score = 32.0 bits (71), Expect = 2.2 Identities = 16/51 (31%), Positives = 27/51 (52%), Gaps = 3/51 (5%) Frame = -1
Query: 188 EIISTHAGFKNIQT---SWPSKKKEKHEEQSLVKGRNEPCCTRQVVEVVAA 45 EII+ FK T + ++KHE + + +GR++PC + V +V A Sbjct: 343 EIINMRVAFKPTSTIARKQHTVSRDKHETELIARGRHDPCVVPRAVPMVEA 393
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SVC1 |
Definition |
tr|Q9SVC1|Q9SVC1_ARATH Putative uncharacterized protein F22O6_230 OS=Arabidopsis thaliana |
Align length |
91 |
Score (bit) |
137.0 |
E-value |
4.0e-31 |
Report |
|