BP912847
Clone id YMU001_000023_E09
Library
Length 622
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
GTTTAGGCAGGGAGCAGGTCCCTTTGCTCCATTTGAGCTGTTTTGCAACACCCGCAATGG
GCTGTGGTAGAAGTCTTTAGCATTGGGGATTGAGCAGTTCACTCAACAGGAAAGATTAGG
TGTGGCAGGACATTATTGTTTTCAGCGAGCGGGTTTTGTGCGTCCTTTTGAGCAGTGAGT
GGTTGCGCTCGTAACGGGCTGTGGATTCCCCCATTGGATTTGGGGTTGTTTTGGTCTTTT
CGGACGAGAGACATTGCATTACAGGTTTTGCTTTTTGCAGGACTTCAAGAGCCAGGTCGA
GGGAGCCGAGGTGTGCCCTCTCACTCTCTTTGCATTGATCTTGACTACCCGCAGTGGGTT
GTGGATTCTCTGCCCAGTCGGAAGTCTTGGCTGTTTACTTTGGTATTCATTACGCCGCCC
TGCAAGGCCAAATATTGCAGGTTAGAGCAAGCGCCCTCCACGAGTTATGTATTGGAGGCC
GTCTAGTCTTAGTGGAGCCAGAGTGTGCTGAGTTTTTGAGGATATTACAGGTTCTTTGTG
TGGATCGCGAAACCCATATTTTGTATGCTAGTTGATGTACGAGCCATAGAGCTCCTGATT
CATATCATTCAGATTGTTGAGC
■■Homology search results ■■ -
sp_hit_id Q5NCY0
Definition sp|Q5NCY0|JMJD3_MOUSE Histone demethylase JMJD3 OS=Mus musculus
Align length 42
Score (bit) 31.2
E-value 4.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912847|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E09.
(622 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q5NCY0|JMJD3_MOUSE Histone demethylase JMJD3 OS=Mus musculus ... 31 4.5
sp|Q23883|NDUS2_DICDI NADH-ubiquinone oxidoreductase 49 kDa subu... 30 7.7
sp|Q2LCR5|NDUS2_DICCI NADH-ubiquinone oxidoreductase 49 kDa subu... 30 7.7
sp|A4TE23|LEUC_MYCGI 3-isopropylmalate dehydratase large subunit... 30 7.7

>sp|Q5NCY0|JMJD3_MOUSE Histone demethylase JMJD3 OS=Mus musculus
GN=Jmjd3 PE=2 SV=1
Length = 1641

Score = 31.2 bits (69), Expect = 4.5
Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = -1

Query: 331 KESERAHLGSLDLALEVLQ---KAKPVMQCLSSEKTKTTPNP 215
KE R LG+LDL E +Q KA+P + +S KT T P P
Sbjct: 1009 KEKSRRVLGNLDLQSEEIQGREKARPDVGGVSKVKTPTAPAP 1050


>sp|Q23883|NDUS2_DICDI NADH-ubiquinone oxidoreductase 49 kDa subunit
OS=Dictyostelium discoideum GN=nad7 PE=3 SV=1
Length = 406

Score = 30.4 bits (67), Expect = 7.7
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1

Query: 322 ERAHLGSLDLALEVLQKAKPVMQCLSSEKTKTTPNPMGEST 200
ER +L SLD+ LE+ Q+AK V++ L SE T+ + M +T
Sbjct: 93 ERLYLDSLDIELEIPQRAK-VIRVLFSEITRVLNHIMATTT 132


>sp|Q2LCR5|NDUS2_DICCI NADH-ubiquinone oxidoreductase 49 kDa subunit
OS=Dictyostelium citrinum GN=nad7 PE=3 SV=1
Length = 406

Score = 30.4 bits (67), Expect = 7.7
Identities = 18/41 (43%), Positives = 27/41 (65%)
Frame = -1

Query: 322 ERAHLGSLDLALEVLQKAKPVMQCLSSEKTKTTPNPMGEST 200
ER +L SLD+ LE+ Q+AK V++ L SE T+ + M +T
Sbjct: 93 ERLYLDSLDIELEIPQRAK-VIRVLFSEITRVLNHIMATTT 132


>sp|A4TE23|LEUC_MYCGI 3-isopropylmalate dehydratase large subunit
OS=Mycobacterium gilvum (strain PYR-GCK) GN=leuC PE=3
SV=1
Length = 481

Score = 30.4 bits (67), Expect = 7.7
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3

Query: 363 GFSAQSEVLAVYFGIHYAALQGQILQVRASALHELCIGGRLVL 491
G SA+ +LAV I QG +++ R SA+ L + GR+ +
Sbjct: 187 GVSAKDVILAVIAKIGTGGGQGHVIEYRGSAIESLSMEGRMTI 229


tr_hit_id Q4QEN4
Definition tr|Q4QEN4|Q4QEN4_LEIMA Putative uncharacterized protein OS=Leishmania major
Align length 77
Score (bit) 36.6
E-value 1.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912847|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E09.
(622 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q4QEN4|Q4QEN4_LEIMA Putative uncharacterized protein OS=Leish... 37 1.2
tr|Q5CFF9|Q5CFF9_CRYHO Putative uncharacterized protein OS=Crypt... 34 6.1
tr|Q5AL64|Q5AL64_CANAL Putative uncharacterized protein OS=Candi... 34 6.2
tr|A2QET4|A2QET4_ASPNC Contig An02c0390, complete genome OS=Aspe... 34 6.2
tr|A8JK15|A8JK15_CHLRE Zygote-specific protein EZY2 (Fragment) O... 34 7.9

>tr|Q4QEN4|Q4QEN4_LEIMA Putative uncharacterized protein
OS=Leishmania major GN=LmjF16.1330 PE=4 SV=1
Length = 1341

Score = 36.6 bits (83), Expect = 1.2
Identities = 26/77 (33%), Positives = 33/77 (42%)
Frame = -3

Query: 239 KDQNNPKSNGGIHSPLRAQPLTAQKDAQNPLAENNNVLPHLIFPVE*TAQSPMLKTSTTA 60
KD+N S HSPL A ++N + V PHL+ AQ P
Sbjct: 261 KDKNKISSTSSSHSPLSA----PASSSENGSTRHPEVSPHLV------AQDP-------- 302

Query: 59 HCGCCKTAQMEQRDLLP 9
HCG +T Q EQ+ L P
Sbjct: 303 HCGLPRTVQPEQQQLRP 319


>tr|Q5CFF9|Q5CFF9_CRYHO Putative uncharacterized protein
OS=Cryptosporidium hominis GN=Chro.50089 PE=4 SV=1
Length = 668

Score = 34.3 bits (77), Expect = 6.1
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = -3

Query: 410 MNTKVNSQDFRLGRESTTHCG*SRSMQRE*EGTPRLPRPGS*SPAKSKT-CNAMSLVRKD 234
MNTK+N Q+ RL ++S++ C S+S R + +P S S ++SK+ + S +
Sbjct: 539 MNTKLNIQNSRLEKKSSSSCSKSKSRSRSRSKSRSRSKPRSKSRSRSKSHSRSRSKSKTR 598

Query: 233 QNNPKSNGGIHSP 195
+ S I SP
Sbjct: 599 SKSYSSRSSISSP 611


>tr|Q5AL64|Q5AL64_CANAL Putative uncharacterized protein OS=Candida
albicans GN=CaO19.12379 PE=4 SV=1
Length = 1209

Score = 34.3 bits (77), Expect = 6.2
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 12/72 (16%)
Frame = -2

Query: 441 PAIFGLAGRRNEYQSKQPRLPTGQRI--HNPLRVVKI----------NAKRVRGHTSAPS 298
P+ + G+ N+ K P L + ++ HN LRV KI K ++ PS
Sbjct: 1108 PSYLKIGGKSNKKIKKLPELESSIKLTSHNMLRVSKILNYLVEKFANTTKEMKDKNLIPS 1167

Query: 297 TWLLKSCKKQNL 262
WL+ CK Q L
Sbjct: 1168 DWLVLQCKGQEL 1179


>tr|A2QET4|A2QET4_ASPNC Contig An02c0390, complete genome
OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513)
GN=An02g12170 PE=4 SV=1
Length = 1015

Score = 34.3 bits (77), Expect = 6.2
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Frame = -2

Query: 438 AIFGLAGRRNEYQSKQPRLPTGQRIHNPLRVVKINAKRVRGHTSAPSTWLLKSCKKQNL* 259
++FG ++NE + K P PTG + ++ A+ + T PST + KK+ +
Sbjct: 765 SMFGTVKKKNEPEPKPPMKPTGSAVAAARAALEDKARAAQEQTIRPSTNGKPTLKKKPVP 824

Query: 258 CN--VSRPK-----RPKQPQIQWGNPQP 196
V PK +P +P +Q P+P
Sbjct: 825 ITVPVEAPKPAESPKPAEPAVQEKAPKP 852


>tr|A8JK15|A8JK15_CHLRE Zygote-specific protein EZY2 (Fragment)
OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_23466 PE=4
SV=1
Length = 420

Score = 33.9 bits (76), Expect = 7.9
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Frame = -3

Query: 245 VRKDQNNPKSNGGIHSPLRAQPLTAQKDAQNPLAENNNVLPHLIFPVE*TAQSPMLKTST 66
+ + NNP S+GG+++ L +T +K A LP + P + T+ S K S+
Sbjct: 96 ITTNNNNPASHGGVYTALTGTEVTGKKPA---------ALPEDLLPADATSTSSTGKISS 146

Query: 65 TAHC----GCCKTAQM 30
A C C AQ+
Sbjct: 147 AAVCCGLLAHCSAAQL 162