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NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912849
Clone id YMU001_000023_E11
Library
Length 604
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_E11.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
AATTCGCGGCCGCGAATGGTTACAGGGAGCTTTGGATACAGGTTTCTTCTGTGGTTACAA
AACATGTATTTTGACTGTGGGACAGCCATGCATATGGTTGTGGTTTGAGTGGGAGCTTCT
ACTCTTCTGGGCAGTCTGTTTATGCGTGTTCTTGAGCTACAGGTTTACATCATCTATGTA
TATTGATGGATGTGGATATGGCAGTTTGACAGACACTCTTTATGCATGATATTGTGGAGA
TTTGGTTCACTTATACGTAAAGCGGGTTTGCTCTTGCTTGCAGTGTTGCGGTTTGAGTAC
GGACAGGTACTTGGTTGACAGTAGAGATTGGACTTCGTTGAGCTTGTGCATTGGTTATAT
GCTCACTTGGATCCATTTATGCTCACGGATTTGTGTAAGCTTGGTCAGCTTATGTCTCTA
TTGTGGTTATTCAGACATGGAGTATGTTTATGCCTCTATGACAGTTCATTGTTGATGCAT
TTTGTGGCACGGTTTGCCTAGGCCGGTTGAGTTACAGATGTCACGGGTTTATGCATTTGT
TTGTGGATTTCTACGTACGTTGTTTGACCATATTATGGGCTGATTTATACTCTATGCGTT
TGCT
■■Homology search results ■■ -
sp_hit_id Q697L2
Definition sp|Q697L2|T2R38_HYLKL Taste receptor type 2 member 38 OS=Hylobates klossii
Align length 64
Score (bit) 32.0
E-value 2.3
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912849|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E11.
         (587 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q697L2|T2R38_HYLKL Taste receptor type 2 member 38 OS=Hylobat...    32   2.3  
sp|A2AIW0|SDCG3_MOUSE Serologically defined colon cancer antigen...    31   4.0  
sp|Q40424|LCYB_NARPS Lycopene beta cyclase, chloroplastic/chromo...    31   4.0  
sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo sa...    31   5.2  
sp|Q4R381|EZH2_MACFA Histone-lysine N-methyltransferase EZH2 OS=...    31   5.2  
sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2 OS=...    31   5.2  
sp|Q5R4N7|REV1_PONAB DNA repair protein REV1 OS=Pongo abelii GN=...    30   6.8  
sp|Q9UBZ9|REV1_HUMAN DNA repair protein REV1 OS=Homo sapiens GN=...    30   6.8  
sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus mus...    30   6.8  
sp|Q94361|GEI17_CAEEL E3 SUMO-protein ligase gei-17 OS=Caenorhab...    30   6.8  
sp|Q9PT62|FZD4_XENLA Frizzled-4 OS=Xenopus laevis GN=fzd4 PE=2 SV=1    30   8.9  

>sp|Q697L2|T2R38_HYLKL Taste receptor type 2 member 38 OS=Hylobates
           klossii GN=TAS2R38 PE=3 SV=1
          Length = 333

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
 Frame = +3

Query: 231 HLYVKRVCSCLQCCGL--STDRYLVDSRDWTSLSLCIGYMLTWIHLCSRICVSLVSLCLY 404
           +L++    S L C  L  S+  +L+    W S  +C   ML  I LCS IC     LC++
Sbjct: 106 NLWLATCLSLLYCSKLIRSSHTFLICLASWVSRKIC--QMLLGIILCSCIC---TVLCVW 160

Query: 405 CGYS 416
           C +S
Sbjct: 161 CYFS 164


>sp|A2AIW0|SDCG3_MOUSE Serologically defined colon cancer antigen 3
           homolog OS=Mus musculus GN=Sdccag3 PE=2 SV=1
          Length = 432

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 17/53 (32%), Positives = 24/53 (45%)
 Frame = -3

Query: 324 STKSNLYCQPSTCPYSNRNTASKSKPALRISEPNLHNIMHKECLSNCHIHIHQ 166
           S  S L C  S  P++  +T S+  PA     PN     H+E L + H+   Q
Sbjct: 214 SNSSELACPESLPPWTLSDTDSRISPASPAGSPNADFAAHEESLGDRHLRTLQ 266


>sp|Q40424|LCYB_NARPS Lycopene beta cyclase,
           chloroplastic/chromoplastic OS=Narcissus pseudonarcissus
           GN=LCY1 PE=2 SV=1
          Length = 503

 Score = 31.2 bits (69), Expect = 4.0
 Identities = 15/39 (38%), Positives = 25/39 (64%)
 Frame = -3

Query: 276 NRNTASKSKPALRISEPNLHNIMHKECLSNCHIHIHQYT 160
           +R+T + S+P  R++  NL + M K+C+SN  +  HQ T
Sbjct: 156 DRSTKNLSRPYARVNRKNLKSKMMKKCVSN-GVRFHQAT 193


>sp|Q5JVF3|PCID2_HUMAN PCI domain-containing protein 2 OS=Homo
           sapiens GN=PCID2 PE=1 SV=2
          Length = 399

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +3

Query: 219 GDLVHLYVKRVCSCLQCCGLSTDRYLVDSRDWTSLSLC-----IGYMLTWIHLCSRICVS 383
           GD++    + + SC + C   T   + DS+ W  L L      I + +  +HLC  +  +
Sbjct: 135 GDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRA 194

Query: 384 LVSLCLYCGYSDMEYV 431
           + S  L   YS  + V
Sbjct: 195 IDSSNLKDDYSTAQRV 210


>sp|Q4R381|EZH2_MACFA Histone-lysine N-methyltransferase EZH2
           OS=Macaca fascicularis GN=EZH2 PE=2 SV=1
          Length = 746

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 400 RHKLTKLTQIREHKWIQVSI*PMHKLNEVQSLLSTKYLSV 281
           R K+ + T+I   +W Q  I P+H L  V SL  T+  SV
Sbjct: 46  RQKILERTEILNQEWKQRRIQPVHILTSVSSLRGTRECSV 85


>sp|Q15910|EZH2_HUMAN Histone-lysine N-methyltransferase EZH2
           OS=Homo sapiens GN=EZH2 PE=1 SV=2
          Length = 746

 Score = 30.8 bits (68), Expect = 5.2
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 400 RHKLTKLTQIREHKWIQVSI*PMHKLNEVQSLLSTKYLSV 281
           R K+ + T+I   +W Q  I P+H L  V SL  T+  SV
Sbjct: 46  RQKILERTEILNQEWKQRRIQPVHILTSVSSLRGTRECSV 85


>sp|Q5R4N7|REV1_PONAB DNA repair protein REV1 OS=Pongo abelii
           GN=REV1 PE=2 SV=1
          Length = 1250

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = -3

Query: 462 CINNELS*RHKHTPCLNNHNR--DIS*PSLHKSVSINGSK*AYNQCTSSTKSNLYCQPST 289
           C   +L    ++T  L N +R    S   LH +  ING+  +  Q  SSTKS        
Sbjct: 274 CTLQQLQQSTRNTDALRNPHRTNSFSLSPLHSNTKINGAHHSTVQGPSSTKST------- 326

Query: 288 CPYSNRNTASKSKPALRISEPNLHNIMHKECLSNCHIHIHQYT*MM*TCSSRTRINRLPR 109
              S+ +T SK+ P++  S+P+  N      +SN + H   +   M  C     +N L R
Sbjct: 327 ---SSVSTFSKAAPSVP-SKPSDCNF-----ISNFYSHSRLHHISMWKCELTEFVNTLQR 377

Query: 108 R 106
           +
Sbjct: 378 Q 378


>sp|Q9UBZ9|REV1_HUMAN DNA repair protein REV1 OS=Homo sapiens
           GN=REV1 PE=1 SV=1
          Length = 1251

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = -3

Query: 462 CINNELS*RHKHTPCLNNHNR--DIS*PSLHKSVSINGSK*AYNQCTSSTKSNLYCQPST 289
           C   +L    ++T  L N +R    S   LH +  ING+  +  Q  SSTKS        
Sbjct: 274 CTLQQLQQSTRNTDALRNPHRTNSFSLSPLHSNTKINGAHHSTVQGPSSTKST------- 326

Query: 288 CPYSNRNTASKSKPALRISEPNLHNIMHKECLSNCHIHIHQYT*MM*TCSSRTRINRLPR 109
              S+ +T SK+ P++  S+P+  N      +SN + H   +   M  C     +N L R
Sbjct: 327 ---SSVSTFSKAAPSVP-SKPSDCNF-----ISNFYSHSRLHHISMWKCELTEFVNTLQR 377

Query: 108 R 106
           +
Sbjct: 378 Q 378


>sp|Q8BFV2|PCID2_MOUSE PCI domain-containing protein 2 OS=Mus
           musculus GN=Pcid2 PE=2 SV=1
          Length = 399

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 19/76 (25%), Positives = 34/76 (44%), Gaps = 5/76 (6%)
 Frame = +3

Query: 219 GDLVHLYVKRVCSCLQCCGLSTDRYLVDSRDWTSLSLC-----IGYMLTWIHLCSRICVS 383
           GD++    + + SC + C   T   + DS+ W  L L      I + +  +HLC  +  +
Sbjct: 135 GDMLEKAAELLMSCFRVCASDTRAGIEDSKKWGMLFLVNQLFKIYFKINKLHLCKPLIRA 194

Query: 384 LVSLCLYCGYSDMEYV 431
           + S  L   YS  + +
Sbjct: 195 IDSSNLKDDYSTAQRI 210


>sp|Q94361|GEI17_CAEEL E3 SUMO-protein ligase gei-17
           OS=Caenorhabditis elegans GN=gei-17 PE=1 SV=3
          Length = 793

 Score = 30.4 bits (67), Expect = 6.8
 Identities = 15/55 (27%), Positives = 29/55 (52%)
 Frame = -3

Query: 330 TSSTKSNLYCQPSTCPYSNRNTASKSKPALRISEPNLHNIMHKECLSNCHIHIHQ 166
           TS  +S+ Y  PS    SN +  +      +  +P  HN++H++ +++ H H+ Q
Sbjct: 105 TSQVRSHPYVLPSRSGASN-HLVNHHYQQQQQQQPQPHNLLHQQMMASHHSHLQQ 158
tr_hit_id Q6Z2M3
Definition tr|Q6Z2M3|Q6Z2M3_ORYSJ Putative phosphatidate cytidylyltransferase domain-containing protein (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica
Align length 59
Score (bit) 38.1
E-value 0.37
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912849|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_E11.
         (587 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q6Z2M3|Q6Z2M3_ORYSJ Putative phosphatidate cytidylyltransfera...    38   0.37 
tr|Q0E4B8|Q0E4B8_ORYSJ Os02g0126900 protein OS=Oryza sativa subs...    38   0.37 
tr|A2X0E5|A2X0E5_ORYSI Putative uncharacterized protein OS=Oryza...    38   0.37 
tr|B6TRR1|B6TRR1_MAIZE Phosphatidate cytidylyltransferase OS=Zea...    37   0.82 
tr|Q9M001|Q9M001_ARATH Phosphatidate cytidylyltransferase OS=Ara...    37   1.1  
tr|B6TI87|B6TI87_MAIZE Phosphatidate cytidylyltransferase OS=Zea...    37   1.1  
tr|A7PYF5|A7PYF5_VITVI Chromosome chr15 scaffold_37, whole genom...    35   3.1  
tr|B1KUS8|B1KUS8_CLOBM Proton-dependent oligopeptide transporter...    35   4.1  
tr|B1QRB3|B1QRB3_CLOBO Pts system N-acetylglucosamine-specific e...    35   4.1  
tr|B1QBR3|B1QBR3_CLOBO Proton-dependent oligopeptide transporter...    35   4.1  
tr|Q62097|Q62097_MOUSE Mus musculus ORFs (putative primordial pr...    32   5.5  
tr|Q94A03|Q94A03_ARATH Phosphatidate cytidylyltransferase OS=Ara...    34   7.0  
tr|Q7XJM7|Q7XJM7_ARATH Phosphatidate cytidylyltransferase OS=Ara...    34   7.0  
tr|Q3E7Q0|Q3E7Q0_ARATH Phosphatidate cytidylyltransferase OS=Ara...    34   7.0  
tr|Q3E6W1|Q3E6W1_ARATH Uncharacterized protein At2g45150.2 OS=Ar...    34   7.0  
tr|B4JZU8|B4JZU8_DROGR GH24007 OS=Drosophila grimshawi GN=GH2400...    34   7.0  
tr|Q4PEP2|Q4PEP2_USTMA Putative uncharacterized protein (Alterna...    34   7.0  
tr|A2BUG4|A2BUG4_PROM5 Arginyl-tRNA synthetase OS=Prochlorococcu...    33   9.1  

>tr|Q6Z2M3|Q6Z2M3_ORYSJ Putative phosphatidate cytidylyltransferase
           domain-containing protein (Putative uncharacterized
           protein) OS=Oryza sativa subsp. japonica GN=P0482F12.20
           PE=4 SV=1
          Length = 362

 Score = 38.1 bits (87), Expect = 0.37
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G+ D+   +++  +    +L  G PR  +L  S    F CG+L
Sbjct: 152 VCSAICALMPILTLYYGHMDVTVTFSAFLIAISLLLQRGNPRFAQLTSSVFGLFYCGYL 210


>tr|Q0E4B8|Q0E4B8_ORYSJ Os02g0126900 protein OS=Oryza sativa subsp.
           japonica GN=Os02g0126900 PE=4 SV=1
          Length = 381

 Score = 38.1 bits (87), Expect = 0.37
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G+ D+   +++  +    +L  G PR  +L  S    F CG+L
Sbjct: 152 VCSAICALMPILTLYYGHMDVTVTFSAFLIAISLLLQRGNPRFAQLTSSVFGLFYCGYL 210


>tr|A2X0E5|A2X0E5_ORYSI Putative uncharacterized protein OS=Oryza
           sativa subsp. indica GN=OsI_05683 PE=4 SV=1
          Length = 362

 Score = 38.1 bits (87), Expect = 0.37
 Identities = 19/59 (32%), Positives = 30/59 (50%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G+ D+   +++  +    +L  G PR  +L  S    F CG+L
Sbjct: 152 VCSAICALMPILTLYYGHMDVTVTFSAFLIAISLLLQRGNPRFAQLTSSVFGLFYCGYL 210


>tr|B6TRR1|B6TRR1_MAIZE Phosphatidate cytidylyltransferase OS=Zea
           mays PE=2 SV=1
          Length = 369

 Score = 37.0 bits (84), Expect = 0.82
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G  D+   +++  +    +L  G PR  +L  S    F CG+L
Sbjct: 138 VCSAICALMPILTLYYGRMDVTVAFSAFVIAIALLLQRGNPRFAQLTSSVFGLFYCGYL 196


>tr|Q9M001|Q9M001_ARATH Phosphatidate cytidylyltransferase
           OS=Arabidopsis thaliana GN=T4C21_30 PE=2 SV=1
          Length = 399

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 20/59 (33%), Positives = 29/59 (49%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G+ D+    A+  V    +L  G PR  +L  +    F CG+L
Sbjct: 172 VCSIICALMPILTLYFGHIDISITSAAFVVAMALLLQRGNPRFSQLSSTMFGLFYCGYL 230


>tr|B6TI87|B6TI87_MAIZE Phosphatidate cytidylyltransferase OS=Zea
           mays PE=2 SV=1
          Length = 369

 Score = 36.6 bits (83), Expect = 1.1
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = +3

Query: 363 CSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           CS IC  +  L LY G  D+   +++  +    +L  G PR  +L  S    F CG+L
Sbjct: 139 CSAICALMPILTLYYGRMDVTVAFSAFVIAIALLLQRGNPRFAQLTSSVFGLFYCGYL 196


>tr|A7PYF5|A7PYF5_VITVI Chromosome chr15 scaffold_37, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00026419001
           PE=4 SV=1
          Length = 397

 Score = 35.0 bits (79), Expect = 3.1
 Identities = 20/59 (33%), Positives = 28/59 (47%)
 Frame = +3

Query: 360 LCSRICVSLVSLCLYCGYSDMEYVYASMTVHC*CILWHGLPRPVELQMSRVYAFVCGFL 536
           +CS IC  +  L LY G  D+    A+  V    +L  G PR  +L  +    F CG+L
Sbjct: 166 VCSVICAVMPLLTLYFGNIDVSVTSAAFFVAMALLLQRGNPRFAQLSSAMFGLFYCGYL 224


>tr|B1KUS8|B1KUS8_CLOBM Proton-dependent oligopeptide transporter
           OS=Clostridium botulinum (strain Loch Maree / Type A3)
           GN=CLK_1482 PE=4 SV=1
          Length = 451

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
 Frame = +2

Query: 359 FMLTDLCKLGQLMSLLWLFRHGVCLCLYD---SSLLMHFVARFA*AG*VTDVTGLCICLW 529
           F + D+ + GQL+SL WL   GV L L +   S L   FV++F+ A  +T    + + +W
Sbjct: 330 FAMADVTRGGQLISLGWLVVFGVVLSLGEMVFSPLGNSFVSKFSPAKLLT----IMMSVW 385

Query: 530 I-STYVV*PYYGLIY 571
           + S++V    YG IY
Sbjct: 386 VFSSFVAAKAYGWIY 400


>tr|B1QRB3|B1QRB3_CLOBO Pts system N-acetylglucosamine-specific
           eiicba component OS=Clostridium botulinum Bf GN=CBB_2312
           PE=4 SV=1
          Length = 451

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
 Frame = +2

Query: 359 FMLTDLCKLGQLMSLLWLFRHGVCLCLYD---SSLLMHFVARFA*AG*VTDVTGLCICLW 529
           F + D+ + GQL+SL WL   GV L L +   S L   FV++F+ A  +T    + + +W
Sbjct: 330 FAMADVTRGGQLISLGWLVVFGVVLSLGEMVFSPLGNSFVSKFSPAKLLT----IMMSVW 385

Query: 530 I-STYVV*PYYGLIY 571
           + S++V    YG IY
Sbjct: 386 VFSSFVAAKAYGWIY 400


>tr|B1QBR3|B1QBR3_CLOBO Proton-dependent oligopeptide transporter
           OS=Clostridium botulinum NCTC 2916 GN=CBN_2096 PE=4 SV=1
          Length = 451

 Score = 34.7 bits (78), Expect = 4.1
 Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
 Frame = +2

Query: 359 FMLTDLCKLGQLMSLLWLFRHGVCLCLYD---SSLLMHFVARFA*AG*VTDVTGLCICLW 529
           F + D+ + GQL+SL WL   GV L L +   S L   FV++F+ A  +T    + + +W
Sbjct: 330 FAMADVTRGGQLISLGWLVVFGVVLSLGEMVFSPLGNSFVSKFSPAKLLT----IMMSVW 385

Query: 530 I-STYVV*PYYGLIY 571
           + S++V    YG IY
Sbjct: 386 VFSSFVAAKAYGWIY 400