BP912850 [AcEST]

BP912850
Clone id	YMU001_000023_E12
Library	YMU01
Length	334
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000023_E12.
Accession	BP912850
Tissue type	prothallium
Developmental stage	-
Contig ID	CL3864Contig1
Sequence	CGACACACTGTGCAGTAATTACTCCATGAATCTCTGCCCAAGATTAAACAGGTCATTAAA AAATGCCAAGCTGCATGGACCTTCACTTCAGCCTTCAAAGAAAAGCCGCCACAATTGACT GCTCTCTGCAAGGACTGAGCTTGAAAGCTTAAACGATTGAATATAGCCCCACAACCATAA GACATGACTAAACCTCTTCATCACAGAACCAGTGCTTCACACGATATGTGATGTTGAGGC ACTAGCTCTGCTCACTGGGGCTTCCTGCTGTATTCATTAGCTCTCCAATCCGCTGACTGC AATGGCATCACATTCGACACACAGTACTCGTCCC
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	Q9Y5T5
Definition	sp\|Q9Y5T5\|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens
Align length	30
Score (bit)	29.3
E-value	6.4
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912850\|Adiantum capillus-veneris mRNA, clone: YMU001_000023_E12. (334 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|Q9Y5T5\|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 O... 29 6.4 sp\|Q1QXC7\|HEM1_CHRSD Glutamyl-tRNA reductase OS=Chromohalobacter... 29 8.4 >sp\|Q9Y5T5\|UBP16_HUMAN Ubiquitin carboxyl-terminal hydrolase 16 OS=Homo sapiens GN=USP16 PE=1 SV=1 Length = 823 Score = 29.3 bits (64), Expect = 6.4 Identities = 13/30 (43%), Positives = 17/30 (56%), Gaps = 5/30 (16%) Frame = -3 Query: 77 HAAWHFLMT-----CLILGRDSWSNYCTVC 3 HA H+L CL+L D+WS +C VC Sbjct: 90 HALKHYLTPRSEPHCLVLSLDNWSVWCYVC 119 >sp\|Q1QXC7\|HEM1_CHRSD Glutamyl-tRNA reductase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=hemA PE=3 SV=1 Length = 424 Score = 28.9 bits (63), Expect = 8.4 Identities = 17/37 (45%), Positives = 24/37 (64%), Gaps = 3/37 (8%) Frame = +2 Query: 41 RLNRSLKNAKLHGPSL---QPSKKSRHN*LLSARTEL 142 RL+R L N LHGP+L + S ++RH+ L +A T L Sbjct: 377 RLSRQLTNKLLHGPTLRLREASGEARHDILKAADTLL 413
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912850\|Adiantum capillus-veneris mRNA, clone: YMU001_000023_E12. (334 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****