BP912852 |
Clone id |
YMU001_000023_F02 |
Library |
YMU01 |
Length |
536 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000023_F02. |
Accession |
BP912852 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
CGTTGCTTGTATGGCGAACGGTGATGGGAGGCATTGTCAGAAAAGACTGGGATGTGGCCC GGCAAGCGAAGCATGAGATTGAGGAAAGGCAAAGGGACCTTGCTAAGAGGAGGAAGATGG AAGGCAAAGTCTGGTTGCCAAGGCATTTTGTGGAGGTGGCTGACGGAGAGGACCGCTGGC ATTGGCGACACATCGGCGAGAGCGTACCGCGAGCACCATTAATGGTGCCGTCCCATCATA ACATCTCCGTAGAGGGCTGTCATGAGGTGTTTTCTCTTTCGAGCTCATGATGACTAGCTT TGTACATGCTGACTCTGTGCAATCAATCCTCTATGTGCCAGGGGAACTCTGACGCTATCA ACGATCCTGCCGATTGATACTGACGACAATGCATGCATGCTTATTCTCTCTTGATTTCTA TTCTTTCTTGTAAGTGAGATTCTTCTTCCATGAGTTAAAAGTCACTGGCGGTTTCTTCTG CATAATCAAGTGGAAATAATGAAGTAGCCAGTGGTTTACTCCAGTCAATAACTTCA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q54NM4 |
Definition |
sp|Q54NM4|OSB10_DICDI Oxysterol-binding protein 10 OS=Dictyostelium discoideum |
Align length |
56 |
Score (bit) |
46.2 |
E-value |
0.0001 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q9SVZ9 |
Definition |
tr|Q9SVZ9|Q9SVZ9_ARATH Putative uncharacterized protein AT4g25860 OS=Arabidopsis thaliana |
Align length |
74 |
Score (bit) |
79.7 |
E-value |
9.0e-14 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912852|Adiantum capillus-veneris mRNA, clone: YMU001_000023_F02. (536 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q9SVZ9|Q9SVZ9_ARATH Putative uncharacterized protein AT4g2586... 80 9e-14 tr|Q9SW00|Q9SW00_ARATH Putative uncharacterized protein AT4g2585... 73 8e-12 tr|Q9LVD4|Q9LVD4_ARATH Oxysterol-binding protein-like OS=Arabido... 73 8e-12 tr|B6UG37|B6UG37_MAIZE Putative uncharacterized protein OS=Zea m... 70 5e-11 tr|B6U0I9|B6U0I9_MAIZE Oxysterol-binding protein OBPa OS=Zea may... 70 9e-11 tr|B4FLU8|B4FLU8_MAIZE Putative uncharacterized protein OS=Zea m... 70 9e-11 tr|Q84Z91|Q84Z91_ORYSJ Oxysterol-binding protein-like (Putative ... 69 2e-10 tr|Q7EZA3|Q7EZA3_ORYSJ Os08g0517700 protein OS=Oryza sativa subs... 69 2e-10 tr|A2YX30|A2YX30_ORYSI Putative uncharacterized protein OS=Oryza... 69 2e-10 tr|A7QLA6|A7QLA6_VITVI Chromosome chr11 scaffold_118, whole geno... 66 1e-09 tr|A5AVM6|A5AVM6_VITVI Putative uncharacterized protein OS=Vitis... 66 1e-09 tr|A2Q1Y1|A2Q1Y1_MEDTR Oxysterol-binding protein OS=Medicago tru... 65 3e-09 tr|Q2HUM2|Q2HUM2_MEDTR Oxysterol-binding protein OS=Medicago tru... 64 6e-09 tr|A9U021|A9U021_PHYPA Predicted protein OS=Physcomitrella paten... 60 9e-08 tr|A2QDL9|A2QDL9_ASPNC Function: KES1 of S. cerevisae plays a ro... 49 1e-04 tr|Q4P315|Q4P315_USTMA Putative uncharacterized protein OS=Ustil... 47 5e-04 tr|Q0UEM6|Q0UEM6_PHANO Putative uncharacterized protein OS=Phaeo... 47 6e-04 tr|Q2UKN5|Q2UKN5_ASPOR Oxysterol-binding protein OS=Aspergillus ... 46 0.001 tr|B8N1L8|B8N1L8_ASPFL Oxysterol binding protein (Osh5), putativ... 46 0.001 tr|B2WL28|B2WL28_PYRTR Oxysterol binding protein OS=Pyrenophora ... 46 0.001 tr|B3RLE9|B3RLE9_TRIAD Putative uncharacterized protein OS=Trich... 44 0.004 tr|A6QRJ7|A6QRJ7_AJECN Putative uncharacterized protein OS=Ajell... 44 0.004 tr|B8M544|B8M544_9EURO Oxysterol binding protein (Osh5), putativ... 44 0.005 tr|A8P5I0|A8P5I0_COPC7 Putative uncharacterized protein OS=Copri... 44 0.005 tr|A7TSJ5|A7TSJ5_VANPO Putative uncharacterized protein OS=Vande... 44 0.005 tr|Q4RUE4|Q4RUE4_TETNG Oxysterol-binding protein (Fragment) OS=T... 44 0.007 tr|B5VJS7|B5VJS7_YEAS6 YHR001Wp-like protein OS=Saccharomyces ce... 44 0.007 tr|B3LSB8|B3LSB8_YEAS1 Putative uncharacterized protein OS=Sacch... 44 0.007 tr|Q5I038|Q5I038_XENLA Oxysterol-binding protein (Fragment) OS=X... 43 0.009 tr|Q4T754|Q4T754_TETNG Chromosome undetermined SCAF8309, whole g... 43 0.009
>tr|Q9SVZ9|Q9SVZ9_ARATH Putative uncharacterized protein AT4g25860 OS=Arabidopsis thaliana GN=AT4g25860 PE=2 SV=1 Length = 380
Score = 79.7 bits (195), Expect = 9e-14 Identities = 35/74 (47%), Positives = 53/74 (71%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V GI++KDW+ AR+AK +EE+QR+ K+R+ G+ W+P+HF V DG+D WH Sbjct: 305 IVWSEVSEGILKKDWERAREAKILVEEKQREALKQREASGESWVPKHFSVVKDGKD-WHC 363
Query: 186 RHIGESVPRAPLMV 227 + +VPRAPL++ Sbjct: 364 SPLQPTVPRAPLVI 377
>tr|Q9SW00|Q9SW00_ARATH Putative uncharacterized protein AT4g25850 (Oxysterol-binding protein-like) OS=Arabidopsis thaliana GN=AT4g25850 PE=2 SV=1 Length = 378
Score = 73.2 bits (178), Expect = 8e-12 Identities = 33/74 (44%), Positives = 51/74 (68%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V GI++KDW+ AR+AK +EE+QR K+R+ G+ W+P+HF+ V DG+D W Sbjct: 305 MVWSEVSEGILKKDWERAREAKIVVEEKQRASLKQREASGESWVPKHFLVVKDGKD-WDC 363
Query: 186 RHIGESVPRAPLMV 227 + +VP APL++ Sbjct: 364 SPLQPTVPPAPLVI 377
>tr|Q9LVD4|Q9LVD4_ARATH Oxysterol-binding protein-like OS=Arabidopsis thaliana GN=At5g57240/MJB24_5 PE=2 SV=1 Length = 379
Score = 73.2 bits (178), Expect = 8e-12 Identities = 32/75 (42%), Positives = 50/75 (66%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V GIV +W+ AR+AK ++EE+QR+ ++RK G+ W+P+HF G+D W Sbjct: 305 VVWGEVSEGIVTNNWEKAREAKRDVEEKQRESLRKRKASGQSWIPKHFSVARTGKD-WDC 363
Query: 186 RHIGESVPRAPLMVP 230 + +VPRAP++VP Sbjct: 364 VPLQPTVPRAPIVVP 378
>tr|B6UG37|B6UG37_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 Length = 87
Score = 70.5 bits (171), Expect = 5e-11 Identities = 33/76 (43%), Positives = 43/76 (56%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V I+ KDW+ ARQAK +EE R L K R G+VW P HF + W Sbjct: 10 VVWAEVSAAILNKDWEAARQAKRRVEETARRLTKERNERGEVWTPSHFSLWQNKHGDWEC 69
Query: 186 RHIGESVPRAPLMVPS 233 + +SVP AP++VPS Sbjct: 70 WPLEDSVPPAPIVVPS 85
>tr|B6U0I9|B6U0I9_MAIZE Oxysterol-binding protein OBPa OS=Zea mays PE=2 SV=1 Length = 409
Score = 69.7 bits (169), Expect = 9e-11 Identities = 32/81 (39%), Positives = 47/81 (58%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V I++KDW+ A+QAK +E+ R AK R G+VW P+HF + W Sbjct: 329 VVWGEVSNAILKKDWETAQQAKRRVEDTARRFAKERNDRGEVWTPKHFSLSQNKSGDWEC 388
Query: 186 RHIGESVPRAPLMVPSHHNIS 248 + +SVP AP++VPS + S Sbjct: 389 WPLEDSVPPAPIVVPSSSSSS 409
>tr|B4FLU8|B4FLU8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 Length = 400
Score = 69.7 bits (169), Expect = 9e-11 Identities = 32/81 (39%), Positives = 47/81 (58%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V I++KDW+ A+QAK +E+ R AK R G+VW P+HF + W Sbjct: 320 VVWGEVSNAILKKDWETAQQAKRRVEDTARRFAKERNDRGEVWTPKHFSLSQNKSGDWEC 379
Query: 186 RHIGESVPRAPLMVPSHHNIS 248 + +SVP AP++VPS + S Sbjct: 380 WPLEDSVPPAPIVVPSSSSSS 400
>tr|Q84Z91|Q84Z91_ORYSJ Oxysterol-binding protein-like (Putative uncharacterized protein) OS=Oryza sativa subsp. japonica GN=P0700D12.114-1 PE=3 SV=1 Length = 391
Score = 68.6 bits (166), Expect = 2e-10 Identities = 30/77 (38%), Positives = 47/77 (61%) Frame = +3
Query: 3 LLVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWH 182 ++VW V I++KDW+ + QAK +E+ R L + R +G+VW+P+HF D W Sbjct: 315 VVVWGEVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWE 374
Query: 183 WRHIGESVPRAPLMVPS 233 + +SVP AP++VPS Sbjct: 375 CSPLEKSVPPAPIIVPS 391
>tr|Q7EZA3|Q7EZA3_ORYSJ Os08g0517700 protein OS=Oryza sativa subsp. japonica GN=P0700D12.114-2 PE=2 SV=1 Length = 388
Score = 68.6 bits (166), Expect = 2e-10 Identities = 30/77 (38%), Positives = 47/77 (61%) Frame = +3
Query: 3 LLVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWH 182 ++VW V I++KDW+ + QAK +E+ R L + R +G+VW+P+HF D W Sbjct: 312 VVVWGEVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWE 371
Query: 183 WRHIGESVPRAPLMVPS 233 + +SVP AP++VPS Sbjct: 372 CSPLEKSVPPAPIIVPS 388
>tr|A2YX30|A2YX30_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_29892 PE=3 SV=1 Length = 391
Score = 68.6 bits (166), Expect = 2e-10 Identities = 30/77 (38%), Positives = 47/77 (61%) Frame = +3
Query: 3 LLVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWH 182 ++VW V I++KDW+ + QAK +E+ R L + R +G+VW+P+HF D W Sbjct: 315 VVVWGEVSDAILKKDWERSSQAKRRVEDTARRLDRERNDKGEVWIPKHFSLSQDKNGSWE 374
Query: 183 WRHIGESVPRAPLMVPS 233 + +SVP AP++VPS Sbjct: 375 CSPLEKSVPPAPIIVPS 391
>tr|A7QLA6|A7QLA6_VITVI Chromosome chr11 scaffold_118, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00001513001 PE=3 SV=1 Length = 391
Score = 66.2 bits (160), Expect = 1e-09 Identities = 30/75 (40%), Positives = 45/75 (60%) Frame = +3
Query: 6 LVWRTVMGGIVRKDWDVARQAKHEIEERQRDLAKRRKMEGKVWLPRHFVEVADGEDRWHW 185 +VW V GI+ KDW+ A+ AK IEE++R+ + RK G+ W+P+HF + E W Sbjct: 316 VVWGEVSQGIMNKDWEKAKAAKTAIEEKEREGLRERKSRGETWVPKHFKLFSGKEGGWDC 375
Query: 186 RHIGESVPRAPLMVP 230 I + VP AP+ +P Sbjct: 376 LPIQDLVPPAPIALP 390
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