BP912853
Clone id YMU001_000023_F03
Library
Length 530
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_F03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGTGCCAAAACAATGGTCATTTCATACCGAGGCTCTGTTGAGACAAAAAAACATGCAGA
GCGGTTCATAGCCAATATGGCATGTCTTTTCAAATACACCCATAAAGGGTAGTATGTCCT
CTTGATCCAAAATTTAACCCTTGATTGGGATCGGAACATGCCTAGACATCTGCACCGGAA
CTCCACTCTCCAAACTTGCTGAGAAAGGGGTTTTCAACAGAGCGCAGATACAAAATTCCA
GACATCACATTTTGATTTAATGCCACCCCTCAAGAATCTGTCTGCTCTTCAGACCCGTGT
TTTGCAAAATTTTCTCGATATTAAGTAAGGACTTTCAAGGAACCGCAATAAATGAGCCAA
GAGATGTACGAGGAACGCTAATAAGCCGATCCAACTCCCTGTCATTAGCCTCCGCATGGT
GTTCCTCCCCACCTTCATGCATCTTCAGCACGAAATCACTCTCTCTAGGTTTCATAGCTG
CCTGTTCAAAGGCCCCATGCCTGAGATAGGCACTGTGTTCCGTCCAGAAA
■■Homology search results ■■ -
sp_hit_id Q7VRQ7
Definition sp|Q7VRQ7|UNG_BLOFL Uracil-DNA glycosylase OS=Blochmannia floridanus
Align length 30
Score (bit) 30.8
E-value 4.2
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912853|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F03.
(530 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q7VRQ7|UNG_BLOFL Uracil-DNA glycosylase OS=Blochmannia florid... 31 4.2
sp|P91645|CAC1A_DROME Voltage-dependent calcium channel type A s... 31 4.2
sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20 OS=A... 30 5.5

>sp|Q7VRQ7|UNG_BLOFL Uracil-DNA glycosylase OS=Blochmannia
floridanus GN=ung PE=3 SV=1
Length = 221

Score = 30.8 bits (68), Expect = 4.2
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3

Query: 228 IQNSRHHILI*CHPSRICLLFRPVFCKIFS 317
I N +HHILI HPS I + + CK FS
Sbjct: 174 INNQKHHILITSHPSPISAKYGFLGCKHFS 203


>sp|P91645|CAC1A_DROME Voltage-dependent calcium channel type A
subunit alpha-1 OS=Drosophila melanogaster GN=cac PE=2
SV=3
Length = 1851

Score = 30.8 bits (68), Expect = 4.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -3

Query: 168 CLGMFRSQSRVKFWIKRTYYPLWVY 94
C G +R++ R +FWI+ T W Y
Sbjct: 420 CTGFWRAEKRFRFWIRHTVKTQWFY 444


>sp|Q93WV0|WRK20_ARATH Probable WRKY transcription factor 20
OS=Arabidopsis thaliana GN=WRKY20 PE=2 SV=1
Length = 557

Score = 30.4 bits (67), Expect = 5.5
Identities = 13/40 (32%), Positives = 24/40 (60%)
Frame = +2

Query: 161 PRHLHRNSTLQTC*ERGFQQSADTKFQTSHFDLMPPLKNL 280
PR +H +++ + RGF Q+ T+ ++S F+ PP N+
Sbjct: 89 PRPVHISASSSSYTGRGFHQNTFTEQKSSEFEFRPPASNM 128


tr_hit_id Q1E739
Definition tr|Q1E739|Q1E739_COCIM Predicted protein OS=Coccidioides immitis
Align length 69
Score (bit) 37.0
E-value 0.62
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP912853|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F03.
(530 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|Q1E739|Q1E739_COCIM Predicted protein OS=Coccidioides immitis... 37 0.62
tr|Q84T51|Q84T51_ORYSJ Putative copia-type pol polyprotein (Retr... 36 1.1
tr|Q17DG7|Q17DG7_AEDAE Voltage-dependent p/q type calcium channe... 34 5.3

>tr|Q1E739|Q1E739_COCIM Predicted protein OS=Coccidioides immitis
GN=CIMG_01624 PE=4 SV=1
Length = 111

Score = 37.0 bits (84), Expect = 0.62
Identities = 26/69 (37%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = -3

Query: 258 KSKC-DVWNFVSALC*KPLSQQVWRVEFRCRCLGMFRSQSRVKFWIKRTYYPLWVYLKRH 82
K++C DVW F+S S +WR R + LG SQ + I R+Y+PLW K
Sbjct: 26 KTRCPDVWRFLS-------SSVIWRENARRQDLGGGLSQHK----IPRSYFPLWQNDKMD 74

Query: 81 AILAMNRSA 55
A N SA
Sbjct: 75 TFKATNESA 83


>tr|Q84T51|Q84T51_ORYSJ Putative copia-type pol polyprotein
(Retrotransposon protein, putative, Ty1-copia subclass)
OS=Oryza sativa subsp. japonica GN=OSJNBa0031I04.6 PE=4
SV=1
Length = 2027

Score = 36.2 bits (82), Expect = 1.1
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = +2

Query: 383 KPIQLPVISLRMVFLPTFMHLQHEITLSRFHSCLFKGPMPEIGTVFRP 526
K + P +RM+ T + +H++T S+ H CL K P+P++ + P
Sbjct: 1874 KALVYPPHIMRMIETVTQLQFRHDVTHSQLHLCLLKAPVPQLLGTYPP 1921


>tr|Q17DG7|Q17DG7_AEDAE Voltage-dependent p/q type calcium channel
(Fragment) OS=Aedes aegypti GN=AAEL004201 PE=3 SV=1
Length = 1516

Score = 33.9 bits (76), Expect = 5.3
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = -3

Query: 189 RVEFRCRCLGMFRSQSRVKFWIKRTYYPLWVY 94
+V+ + +C+G +R++ R +FWI+ T W Y
Sbjct: 415 KVKTQGKCIGFWRAEKRFRFWIRHTVKTQWFY 446