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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
NBDC - LSDB Archive
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AcEST | BlastX Result : Swiss-Prot | BlastX Result : TrEMBL | AcESTcontig | About Libraries
BP912855
Clone id YMU001_000023_F05
Library
Length 543
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000023_F05.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCAAGTCATTCGCACGCTGCACTCCAAGCCGATTTCTCTTCTTGAGCAACATGGCTGTAC
ACTGACAACAGCTGCTCTAAGCAACTGGTACTGCGGGCCTGCAAGAGTATGTGAACTGCA
ACCTCATGTAGCTGAGGAGTCTCTGCACCATAGTCCTCCCAGCATAGTGCAGACCCTACC
TCGAAAGCGGTCCAGCCAATCAAGCCAGTGCTCCCCCTCTTCTCTCTGTAGATCTATAAC
TGGTTTTTGATTGTGCATGCACCTTAGGTCCTCATCCTTTGGGTAGAGTTTCTCCCGGAA
GCCTTCCATGACTTCAGCATCCTGTGTTTTCCTCTACCTTGAAACTATGGATCTACCATA
AAGGAATCAGCATGTATAGGGGAGTGGTACTCAATCCACCTCTTCACACACAGCCTTTTC
ACCTCTTTGTACTGAGCCGGCAACACTTGCTCTTTAATCTTGACCTTGAATTTCTCTATC
ATGCTATCTATGCCCTCATACACCTTCCCAATGCAGGGCCGTGAAGAGTCCACATCTCTT
AAG
■■Homology search results ■■ -
sp_hit_id A9MPK1
Definition sp|A9MPK1|DGTP_SALAR Deoxyguanosinetriphosphate triphosphohydrolase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Align length 57
Score (bit) 29.6
E-value 9.9
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912855|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F05.
         (543 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|A9MPK1|DGTP_SALAR Deoxyguanosinetriphosphate triphosphohydrol...    30   9.9  

>sp|A9MPK1|DGTP_SALAR Deoxyguanosinetriphosphate triphosphohydrolase
           OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86
           / RSK2980) GN=dgt PE=3 SV=1
          Length = 505

 Score = 29.6 bits (65), Expect = 9.9
 Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
 Frame = -1

Query: 321 DAEVMEGFREKLYPKD-EDLRCMHNQKPVIDLQREEGEHWLDWLDR-FRGRVCTMLG 157
           +A + + FR++LYP+D E     H++  V  L+ +EGE  L+ + R  R  +C   G
Sbjct: 129 EAAINDWFRQRLYPEDAESQPLTHDRCVVSSLRLQEGEESLNDIRRKVRQDICYFEG 185
tr_hit_id A5C171
Definition tr|A5C171|A5C171_VITVI Putative uncharacterized protein OS=Vitis vinifera
Align length 161
Score (bit) 50.4
E-value 4.0e-06
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP912855|Adiantum capillus-veneris mRNA, clone:
YMU001_000023_F05.
         (543 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|A5C171|A5C171_VITVI Putative uncharacterized protein OS=Vitis...    50   4e-06
tr|Q9SQN5|Q9SQN5_ARATH Putative uncharacterized protein F19K16.2...    54   5e-06
tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis...    53   1e-05
tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, who...    52   2e-05
tr|B8AAM6|B8AAM6_ORYSI Putative uncharacterized protein OS=Oryza...    44   0.004
tr|Q6RZV0|Q6RZV0_MUSAC Transposase-like protein OS=Musa acuminat...    44   0.007
tr|Q5NB62|Q5NB62_ORYSJ HAT dimerisation domain-containing protei...    42   0.016
tr|Q0JPH5|Q0JPH5_ORYSJ cDNA clone:J013170M12, full insert sequen...    42   0.016
tr|A2ZQT3|A2ZQT3_ORYSJ Putative uncharacterized protein OS=Oryza...    42   0.016
tr|A7QEL3|A7QEL3_VITVI Chromosome chr17 scaffold_85, whole genom...    42   0.021
tr|A5AXS2|A5AXS2_VITVI Putative uncharacterized protein OS=Vitis...    41   0.036
tr|A7QG01|A7QG01_VITVI Chromosome chr9 scaffold_90, whole genome...    40   0.079
tr|A7QKN8|A7QKN8_VITVI Chromosome chr2 scaffold_113, whole genom...    40   0.10 
tr|A7P6V7|A7P6V7_VITVI Chromosome chr9 scaffold_7, whole genome ...    40   0.10 
tr|A5B3V6|A5B3V6_VITVI Putative uncharacterized protein OS=Vitis...    40   0.10 
tr|A3BRV8|A3BRV8_ORYSJ Putative uncharacterized protein OS=Oryza...    40   0.10 
tr|A7PR20|A7PR20_VITVI Chromosome chr6 scaffold_25, whole genome...    39   0.14 
tr|A5BAA6|A5BAA6_VITVI Putative uncharacterized protein OS=Vitis...    39   0.18 
tr|A7QJZ0|A7QJZ0_VITVI Chromosome undetermined scaffold_109, who...    39   0.23 
tr|A5B5G2|A5B5G2_VITVI Putative uncharacterized protein OS=Vitis...    39   0.23 
tr|A3BRP1|A3BRP1_ORYSJ Putative uncharacterized protein OS=Oryza...    39   0.23 
tr|A7QLC0|A7QLC0_VITVI Chromosome chr11 scaffold_118, whole geno...    38   0.39 
tr|A7Q5M1|A7Q5M1_VITVI Chromosome undetermined scaffold_53, whol...    38   0.39 
tr|A7PRW6|A7PRW6_VITVI Chromosome chr14 scaffold_27, whole genom...    38   0.39 
tr|A5B3G6|A5B3G6_VITVI Putative uncharacterized protein OS=Vitis...    38   0.39 
tr|A5AWE7|A5AWE7_VITVI Putative uncharacterized protein OS=Vitis...    38   0.39 
tr|Q2R1C3|Q2R1C3_ORYSJ HAT family dimerisation domain containing...    37   0.67 
tr|A7PBM6|A7PBM6_VITVI Chromosome chr16 scaffold_10, whole genom...    37   0.67 
tr|A7PAM2|A7PAM2_VITVI Chromosome chr14 scaffold_9, whole genome...    37   0.67 
tr|A5ASJ2|A5ASJ2_VITVI Putative uncharacterized protein OS=Vitis...    37   0.67 

>tr|A5C171|A5C171_VITVI Putative uncharacterized protein OS=Vitis
            vinifera GN=VITISV_044224 PE=4 SV=1
          Length = 926

 Score = 50.4 bits (119), Expect(2) = 4e-06
 Identities = 46/161 (28%), Positives = 72/161 (44%), Gaps = 9/161 (5%)
 Frame = -2

Query: 542  LRDVDSSRPCIGKVYEGIDSMIEKFKVKIKEQVLPAQYKEVKRLCVKRW-IEYHSPIHAD 366
            LR VD   P +G +YEGI+    K  +K     +  +Y  +  +  +RW ++ HSP+HA 
Sbjct: 682  LRIVDGDMPAMGYIYEGIER--AKIAIKXYYNSIEEKYMPIWDIIDRRWNVQLHSPLHAA 739

Query: 365  SFMVDP-*FQG---RGKHRMLKSWKASGRNSTQRMRT*GACTIKNQL*IYREKRGSTG-- 204
            +  ++P  F G   +   RM   ++ + R      R      I  +  IY   +G+ G  
Sbjct: 740  AAFLNPSIFYGPNFKVDLRMRNGFQEAMRKMATEDR--DKIEITKEHPIYINAQGALGTE 797

Query: 203  --LIGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARST 87
              ++G T    G    W  YG E P L   A+ IL Q  S+
Sbjct: 798  FAIMGRTLNAAGD--WWAGYGYEIPTLQRAAIRILSQPCSS 836



 Score = 23.1 bits (48), Expect(2) = 4e-06
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 55  AMLLKKRNRLGVQRANDL 2
           A+  KKRNR+ +++ NDL
Sbjct: 848 ALHTKKRNRMELEKLNDL 865


>tr|Q9SQN5|Q9SQN5_ARATH Putative uncharacterized protein F19K16.28
           (F20B17.17) OS=Arabidopsis thaliana GN=At1g79740 PE=4
           SV=1
          Length = 518

 Score = 53.9 bits (128), Expect = 5e-06
 Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 7/178 (3%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVKIKEQVLPAQ--YKEVKRLCVKRWIEY-HSPIH 372
           LR+V + +P +G +YE    ++ K K  I+   +  +  +K    +    W E+ HSP+H
Sbjct: 259 LREVSTGKPAVGSIYE----LMSKAKESIRTYYIMDENKHKVFSDIVDTNWCEHLHSPLH 314

Query: 371 ADSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GAC--TIKNQL*IYREKRGSTG-- 204
           A +  ++P  Q   + + L S K       +++         I NQ+  +   +G  G  
Sbjct: 315 AAAAFLNPSIQYNPEIKFLTSLKEDFFKVLEKLLPTSDLRRDITNQIFTFTRAKGMFGCN 374

Query: 203 LIGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
           L       V   L WE +G   P L  VA+ IL Q  S   LE+  S +  +  E ++
Sbjct: 375 LAMEARDSVSPGLWWEQFGDSAPVLQRVAIRILSQVCSGYNLERQWSTFQQMHWERRN 432


>tr|A5BF00|A5BF00_VITVI Putative uncharacterized protein OS=Vitis
           vinifera GN=VITISV_003006 PE=4 SV=1
          Length = 635

 Score = 52.8 bits (125), Expect = 1e-05
 Identities = 41/167 (24%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVKIKEQVLPAQYKEVKRLCVKRWIEYHSPIHADS 363
           L  +D  +  +G V+      +E  K K  + +L     +++ L   +W    SP+HA  
Sbjct: 400 LTTLDIEKSVMGDVFNWRVQALEAVKSKGVDDIL---LNQLELLIESKWDMLFSPLHASG 456

Query: 362 FMVDP*FQGRGKHR---MLKSWKAS-----GRNSTQRMRT*GACTIKNQL*IYREKRGST 207
           ++++P + G+G+ +   +++ WKA+       ++T+R+       ++ QL  Y    GS 
Sbjct: 457 YILNPKYFGKGQSKDKTIMRGWKATLDRYESDSATRRV-------LREQLSSYWRLEGSF 509

Query: 206 GLIGWTAF--EVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQ 72
           G         ++     WE++G ETP L  +A+ IL Q  S S  ++
Sbjct: 510 GEEDAVDCRDKMDPVAWWENFGFETPHLQTLAIKILSQVSSVSMYQE 556


>tr|A7QTU3|A7QTU3_VITVI Chromosome undetermined scaffold_171, whole
           genome shotgun sequence OS=Vitis vinifera
           GN=GSVIVT00006487001 PE=4 SV=1
          Length = 633

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 44/178 (24%), Positives = 79/178 (44%), Gaps = 7/178 (3%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVKIKEQVL--PAQYKEVKRLCVKRWI-EYHSPIH 372
           LR+V   +P +G +YE    ++ K K  I+   +   ++ K    +   RW  + HSP+H
Sbjct: 372 LREVSGGKPAVGSIYE----LMTKAKESIRTYYIMDESKCKAFLDIVDGRWRNQLHSPLH 427

Query: 371 ADSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GACT--IKNQL*IYREKRGSTG-- 204
           A +  ++P  Q   + + + + K       +++         I NQ+ ++    G  G  
Sbjct: 428 AAAAFLNPSIQYNPEIKFIGAIKEDFFKVLEKLLPTSDMRRDITNQILLFTRATGMFGCN 487

Query: 203 LIGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
           L       V   L WE +G   P L  VA+ IL Q  STS  E+  + +  +  E+++
Sbjct: 488 LAREARDTVPPGLWWEQFGDSAPVLQRVAIRILSQVCSTSTFERHWNTFQQIHSEKRN 545


>tr|B8AAM6|B8AAM6_ORYSI Putative uncharacterized protein OS=Oryza
            sativa subsp. indica GN=OsI_00947 PE=4 SV=1
          Length = 1045

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
 Frame = -2

Query: 542  LRDVDSSRPCIGKVYEGIDSMIEKFKVK-IKEQVLPAQYKEVKRLCVKRW-IEYHSPIHA 369
            +RDV   +  IG +YE +  +++  +   I ++    + K    +  ++W +E HSP+H+
Sbjct: 785  MRDVSGGKAAIGYIYESMTKVMDSIRTYYIMDE---GKCKSFLDIVEQKWQVELHSPLHS 841

Query: 368  DSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GACT--IKNQL*IYREKRGSTG--L 201
             +  ++P  Q   + +   S K    +   ++ T       I  +L  +R+ +G  G  +
Sbjct: 842  AAAFLNPSIQYNPEVKFFSSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQGMFGSNI 901

Query: 200  IGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
                       + WE YG   P L   AV I+ Q  ST   ++  S+      E+++
Sbjct: 902  AKEARNNTSPGMWWEQYGDSAPSLQHAAVRIVSQVCSTLTFQRDWSIIVRNHSEKRN 958


>tr|Q6RZV0|Q6RZV0_MUSAC Transposase-like protein OS=Musa acuminata
           GN=H9-4 PE=4 SV=1
          Length = 670

 Score = 43.5 bits (101), Expect = 0.007
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 16/181 (8%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVKIKEQVLPAQYKEVKRLCVKRW-IEYHSPIHA- 369
           LR VD   P +G +YEGI+    K  +K   +    +Y  V  +  +RW +  HS +HA 
Sbjct: 430 LRLVDGDMPAMGYIYEGIER--AKMAIKAFYKGCEEKYMSVLEIIERRWSMHCHSHLHAA 487

Query: 368 -----DSFMVDP*FQ-----GRGKHRMLKSWKASGRNSTQRMRT*GACTIKNQL*IYREK 219
                 S   DP F+       G H  +  WK     + +         IK+Q  +Y + 
Sbjct: 488 AAFLNPSIFYDPSFKFDVNMRNGFHAAM--WKMFPEENDR------IELIKDQP-VYIKA 538

Query: 218 RGSTG----LIGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSH 51
           +G+ G    ++G T    G    W  YG E P L   AV IL Q  S+   +   S + +
Sbjct: 539 QGALGSKFAIMGRTLNSPGD--WWATYGYEIPVLQRAAVRILSQPCSSYWFKWNWSAFEN 596

Query: 50  V 48
           +
Sbjct: 597 I 597


>tr|Q5NB62|Q5NB62_ORYSJ HAT dimerisation domain-containing
           protein-like OS=Oryza sativa subsp. japonica
           GN=P0443E05.15 PE=4 SV=1
          Length = 679

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVK-IKEQVLPAQYKEVKRLCVKRW-IEYHSPIHA 369
           +RDV   +  IG +YE +  +++  +   I ++    + K    +  ++W +E HSP+H+
Sbjct: 419 MRDVLGGKAAIGYIYESMTKVMDSIRTYYIMDE---GKCKSFLDIVEQKWQVELHSPLHS 475

Query: 368 DSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GACT--IKNQL*IYREKRGSTG--L 201
            +  ++P  Q   + +   S K    +   ++ T       I  +L  +R+ +G  G  +
Sbjct: 476 AAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQGMFGSNI 535

Query: 200 IGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
                      + WE YG   P L   AV I+ Q  ST   ++  S+      E+++
Sbjct: 536 AKEARNNTSPGMWWEQYGDSAPSLQHAAVRIVSQVCSTLTFQRDWSIIVRNHSEKRN 592


>tr|Q0JPH5|Q0JPH5_ORYSJ cDNA clone:J013170M12, full insert sequence
           OS=Oryza sativa subsp. japonica GN=Os01g0222700 PE=2
           SV=1
          Length = 692

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVK-IKEQVLPAQYKEVKRLCVKRW-IEYHSPIHA 369
           +RDV   +  IG +YE +  +++  +   I ++    + K    +  ++W +E HSP+H+
Sbjct: 432 MRDVLGGKAAIGYIYESMTKVMDSIRTYYIMDE---GKCKSFLDIVEQKWQVELHSPLHS 488

Query: 368 DSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GACT--IKNQL*IYREKRGSTG--L 201
            +  ++P  Q   + +   S K    +   ++ T       I  +L  +R+ +G  G  +
Sbjct: 489 AAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQGMFGSNI 548

Query: 200 IGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
                      + WE YG   P L   AV I+ Q  ST   ++  S+      E+++
Sbjct: 549 AKEARNNTSPGMWWEQYGDSAPSLQHAAVRIVSQVCSTLTFQRDWSIIVRNHSEKRN 605


>tr|A2ZQT3|A2ZQT3_ORYSJ Putative uncharacterized protein OS=Oryza
           sativa subsp. japonica GN=OsJ_000905 PE=4 SV=1
          Length = 721

 Score = 42.4 bits (98), Expect = 0.016
 Identities = 39/177 (22%), Positives = 77/177 (43%), Gaps = 6/177 (3%)
 Frame = -2

Query: 542 LRDVDSSRPCIGKVYEGIDSMIEKFKVK-IKEQVLPAQYKEVKRLCVKRW-IEYHSPIHA 369
           +RDV   +  IG +YE +  +++  +   I ++    + K    +  ++W +E HSP+H+
Sbjct: 461 MRDVLGGKAAIGYIYESMTKVMDSIRTYYIMDE---GKCKSFLDIVEQKWQVELHSPLHS 517

Query: 368 DSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT*GACT--IKNQL*IYREKRGSTG--L 201
            +  ++P  Q   + +   S K    +   ++ T       I  +L  +R+ +G  G  +
Sbjct: 518 AAAFLNPSIQYNPEVKFFTSIKEEFYHVLDKVLTVPDQRQGITVELHAFRKAQGMFGSNI 577

Query: 200 IGWTAFEVGSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEKS 30
                      + WE YG   P L   AV I+ Q  ST   ++  S+      E+++
Sbjct: 578 AKEARNNTSPGMWWEQYGDSAPSLQHAAVRIVSQVCSTLTFQRDWSIIVRNHSEKRN 634


>tr|A7QEL3|A7QEL3_VITVI Chromosome chr17 scaffold_85, whole genome
           shotgun sequence OS=Vitis vinifera GN=GSVIVT00037067001
           PE=4 SV=1
          Length = 228

 Score = 42.0 bits (97), Expect = 0.021
 Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 7/177 (3%)
 Frame = -2

Query: 542 LRDVDSS-RPCIGKVYEGIDSMIEK--FKVKIKEQVLPAQYKEVKRLCVKRWI-EYHSPI 375
           LR+VDS  RP +G + E +DS  EK  F  +  E++    Y  + R    RW  ++H P+
Sbjct: 49  LREVDSKERPTMGYINELMDSTKEKIAFNCRGVERI----YGPIWRKIYARWTPQHHRPL 104

Query: 374 HADSFMVDP*FQGRGKHRMLKSWKASGRNSTQRMRT-*GACTIKNQL*IYREKRGSTGLI 198
           HA  + ++P  +   K   +   +        RM           QL  Y +  G  G  
Sbjct: 105 HAAGYYLNPQLRYGDKFSNVDEVRKGLFECMDRMLDYQERLKADIQLDSYDQAMGEFGSR 164

Query: 197 GWTAFEV--GSALCWEDYGAETPQLHEVAVHILLQARSTSCLEQLLSVYSHVAQEEK 33
               F+    S   W  +G  TP+L + A+ +L    S S  E+  S +  +  ++K
Sbjct: 165 IVIDFQTLRSSTHWWMHFGGSTPELQKFAIRVLSLTCSASGCERNWSTFESIHTKKK 221